RNA–Protein interactions for RNA: ENST00000635750.1

SCN1A-209, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,299 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-209ENST00000635750 CTPS2Q9NRF8 586 aa5.38□□□□□ -1.55
SCN1A-209ENST00000635750 CUEDC1Q9NWM3 386 aaPredicted RBP5.38□□□□□ -1.55
SCN1A-209ENST00000635750 TAC3Q9UHF0 121 aa5.38□□□□□ -1.55
SCN1A-209ENST00000635750 REXO2Q9Y3B8 237 aaKnown RBP5.38□□□□□ -1.55
SCN1A-209ENST00000635750 USP32Q8NFA0 1604 aa5.38□□□□□ -1.55
SCN1A-209ENST00000635750 BTNL10A8MVZ5 291 aa5.38□□□□□ -1.55
SCN1A-209ENST00000635750 DNM1LO00429 736 aa5.38□□□□□ -1.55
SCN1A-209ENST00000635750 BCAS2O75934 225 aaPredicted RBP5.38□□□□□ -1.55
SCN1A-209ENST00000635750 JUNP05412 331 aaKnown RBP5.38□□□□□ -1.55
SCN1A-209ENST00000635750 PRDX6P30041 224 aa5.38□□□□□ -1.55
SCN1A-209ENST00000635750 TSFMP43897 325 aaKnown RBP5.38□□□□□ -1.55
SCN1A-209ENST00000635750 EPHA4P54764 986 aa5.38□□□□□ -1.55
SCN1A-209ENST00000635750 RPL7AP62424 266 aaKnown RBP5.38□□□□□ -1.55
SCN1A-209ENST00000635750 ATAD3CQ5T2N8 411 aa5.38□□□□□ -1.55
SCN1A-209ENST00000635750 RPL13AP3Q6NVV1 102 aa5.38□□□□□ -1.55
SCN1A-209ENST00000635750 VTCN1Q7Z7D3 282 aa5.38□□□□□ -1.55
SCN1A-209ENST00000635750 OR4K14Q8NGD5 310 aa5.38□□□□□ -1.55
SCN1A-209ENST00000635750 GNPDA2Q8TDQ7 276 aa5.38□□□□□ -1.55
SCN1A-209ENST00000635750 SLC35C1Q96A29 364 aa5.38□□□□□ -1.55
SCN1A-209ENST00000635750 AMDHD1Q96NU7 426 aa5.38□□□□□ -1.55
SCN1A-209ENST00000635750 PITX2Q99697 317 aa5.38□□□□□ -1.55
SCN1A-209ENST00000635750 ZNF442Q9H7R0 627 aa5.38□□□□□ -1.55
SCN1A-209ENST00000635750 GOLGA2P5Q9HBQ8 144 aa5.38□□□□□ -1.55
SCN1A-209ENST00000635750 HRASLS2Q9NWW9 162 aa5.38□□□□□ -1.55
SCN1A-209ENST00000635750 CA14Q9ULX7 337 aa5.38□□□□□ -1.55
SCN1A-209ENST00000635750 BTBD17A6NE02 478 aa5.38□□□□□ -1.55
SCN1A-209ENST00000635750 A8MVJ9 347 aa5.38□□□□□ -1.55
SCN1A-209ENST00000635750 ARVCFO00192 962 aa5.38□□□□□ -1.55
SCN1A-209ENST00000635750 TLR4O00206 839 aa5.38□□□□□ -1.55
SCN1A-209ENST00000635750 NPHS1O60500 1241 aa5.38□□□□□ -1.55
SCN1A-209ENST00000635750 BANF1O75531 89 aa5.38□□□□□ -1.55
SCN1A-209ENST00000635750 RORAP35398 523 aa5.38□□□□□ -1.55
SCN1A-209ENST00000635750 FXYD6P3P58550 94 aa5.38□□□□□ -1.55
SCN1A-209ENST00000635750 POU6F2P78424 691 aaPredicted RBP5.38□□□□□ -1.55
SCN1A-209ENST00000635750 EEF1A2Q05639 463 aaKnown RBP5.38□□□□□ -1.55
SCN1A-209ENST00000635750 OR10G2Q8NGC3 310 aa5.38□□□□□ -1.55
SCN1A-209ENST00000635750 LRRC58Q96CX6 371 aa5.38□□□□□ -1.55
SCN1A-209ENST00000635750 TMEM74Q96NL1 305 aa5.38□□□□□ -1.55
SCN1A-209ENST00000635750 MROQ9BYG7 248 aa5.38□□□□□ -1.55
SCN1A-209ENST00000635750 IL17RBQ9NRM6 502 aa5.38□□□□□ -1.55
SCN1A-209ENST00000635750 UCKL1Q9NWZ5 548 aa5.38□□□□□ -1.55
SCN1A-209ENST00000635750 EPHA6Q9UF33 1036 aa5.38□□□□□ -1.55
SCN1A-209ENST00000635750 FBXW11Q9UKB1 542 aa5.38□□□□□ -1.55
SCN1A-209ENST00000635750 CDH10Q9Y6N8 788 aa5.38□□□□□ -1.55
SCN1A-209ENST00000635750 SLIT1O75093 1534 aa5.38□□□□□ -1.55
SCN1A-209ENST00000635750 hCG_1809904A0A1W2PP81 198 aa5.37□□□□□ -1.55
SCN1A-209ENST00000635750 A0A1W2PPE2 198 aa5.37□□□□□ -1.55
SCN1A-209ENST00000635750 A0A1W2PR64 198 aa5.37□□□□□ -1.55
SCN1A-209ENST00000635750 A0A1W2PRV1 198 aa5.37□□□□□ -1.55
SCN1A-209ENST00000635750 C11orf98E9PRG8 122 aa5.37□□□□□ -1.55
SCN1A-209ENST00000635750 B4GALT5O43286 388 aa5.37□□□□□ -1.55
SCN1A-209ENST00000635750 MFSD11O43934 449 aa5.37□□□□□ -1.55
SCN1A-209ENST00000635750 ADRB2P07550 413 aa5.37□□□□□ -1.55
SCN1A-209ENST00000635750 GALTP07902 379 aa5.37□□□□□ -1.55
SCN1A-209ENST00000635750 CCND3P30281 292 aaPredicted RBP5.37□□□□□ -1.55
SCN1A-209ENST00000635750 GRM2Q14416 872 aa5.37□□□□□ -1.55
SCN1A-209ENST00000635750 FBXO43Q4G163 708 aa5.37□□□□□ -1.55
SCN1A-209ENST00000635750 FAM69BQ5VUD6 431 aa5.37□□□□□ -1.55
SCN1A-209ENST00000635750 GID4Q8IVV7 300 aa5.37□□□□□ -1.55
SCN1A-209ENST00000635750 POGLUT1Q8NBL1 392 aa5.37□□□□□ -1.55
SCN1A-209ENST00000635750 OR14K1Q8NGZ2 314 aa5.37□□□□□ -1.55
SCN1A-209ENST00000635750 ART4Q93070 314 aa5.37□□□□□ -1.55
SCN1A-209ENST00000635750 RAD9AQ99638 391 aa5.37□□□□□ -1.55
SCN1A-209ENST00000635750 SULT4A1Q9BR01 284 aa5.37□□□□□ -1.55
SCN1A-209ENST00000635750 B3GNT5Q9BYG0 378 aa5.37□□□□□ -1.55
SCN1A-209ENST00000635750 SLC2A11Q9BYW1 496 aa5.37□□□□□ -1.55
SCN1A-209ENST00000635750 ACSS2Q9NR19 701 aa5.37□□□□□ -1.55
SCN1A-209ENST00000635750 B3GNT2Q9NY97 397 aa5.37□□□□□ -1.55
SCN1A-209ENST00000635750 SEC14L4Q9UDX3 406 aa5.37□□□□□ -1.55
SCN1A-209ENST00000635750 FKBPLQ9UIM3 349 aa5.37□□□□□ -1.55
SCN1A-209ENST00000635750 UBE2J1Q9Y385 318 aaPredicted RBP5.37□□□□□ -1.55
SCN1A-209ENST00000635750 CFAP20Q9Y6A4 193 aaKnown RBP5.37□□□□□ -1.55
SCN1A-209ENST00000635750 IQGAP1P46940 1657 aa5.37□□□□□ -1.55
SCN1A-209ENST00000635750 C17orf113A0A1B0GUU1 675 aa5.37□□□□□ -1.55
SCN1A-209ENST00000635750 GLTPD2A6NH11 291 aa5.37□□□□□ -1.55
SCN1A-209ENST00000635750 A8MXE2 369 aa5.37□□□□□ -1.55
SCN1A-209ENST00000635750 H3BSH0 61 aa5.37□□□□□ -1.55
SCN1A-209ENST00000635750 RRP8O43159 456 aaKnown RBP5.37□□□□□ -1.55
SCN1A-209ENST00000635750 ATP6V1G1O75348 118 aa5.37□□□□□ -1.55
SCN1A-209ENST00000635750 ABOP16442 354 aa5.37□□□□□ -1.55
SCN1A-209ENST00000635750 ZNF28P17035 718 aa5.37□□□□□ -1.55
SCN1A-209ENST00000635750 ZNF43P17038 809 aa5.37□□□□□ -1.55
SCN1A-209ENST00000635750 DDCP20711 480 aa5.37□□□□□ -1.55
SCN1A-209ENST00000635750 FMO3P31513 532 aa5.37□□□□□ -1.55
SCN1A-209ENST00000635750 SOX9P48436 509 aa5.37□□□□□ -1.55
SCN1A-209ENST00000635750 NOMO3P69849 1222 aa5.37□□□□□ -1.55
SCN1A-209ENST00000635750 SLC18A2Q05940 514 aa5.37□□□□□ -1.55
SCN1A-209ENST00000635750 PCBP2Q15366 365 aaKnown RBP eCLIP5.37□□□□□ -1.551e-9■■■■■ 28.3
SCN1A-209ENST00000635750 RALGPS1Q5JS13 557 aa5.37□□□□□ -1.55
SCN1A-209ENST00000635750 PLEKHG7Q6ZR37 379 aa5.37□□□□□ -1.55
SCN1A-209ENST00000635750 GALNT10Q86SR1 603 aa5.37□□□□□ -1.55
SCN1A-209ENST00000635750 TRABD2AQ86V40 505 aa5.37□□□□□ -1.55
SCN1A-209ENST00000635750 ZNF619Q8N2I2 560 aa5.37□□□□□ -1.55
SCN1A-209ENST00000635750 ZBTB8BQ8NAP8 495 aaPredicted RBP5.37□□□□□ -1.55
SCN1A-209ENST00000635750 OR51D1Q8NGF3 324 aa5.37□□□□□ -1.55
SCN1A-209ENST00000635750 SUN5Q8TC36 379 aa5.37□□□□□ -1.55
SCN1A-209ENST00000635750 DQX1Q8TE96 717 aaKnown RBP5.37□□□□□ -1.55
SCN1A-209ENST00000635750 ECHDC3Q96DC8 303 aa5.37□□□□□ -1.55
SCN1A-209ENST00000635750 ZNF599Q96NL3 588 aa5.37□□□□□ -1.55
SCN1A-209ENST00000635750 C1orf21Q9H246 121 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms