RNA–Protein interactions for RNA: ENST00000635578.1

SMARCB1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 242 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-209ENST00000635578 AMER3Q8N944 861 aa0.96□□□□□ -2.26
SMARCB1-209ENST00000635578 CCDC89Q8N998 374 aa0.96□□□□□ -2.26
SMARCB1-209ENST00000635578 TC2NQ8N9U0 490 aa0.96□□□□□ -2.26
SMARCB1-209ENST00000635578 NUP37Q8NFH4 326 aa0.96□□□□□ -2.26
SMARCB1-209ENST00000635578 OR7A2PQ8NGA2 310 aa0.96□□□□□ -2.26
SMARCB1-209ENST00000635578 OR4C15Q8NGM1 316 aa0.96□□□□□ -2.26
SMARCB1-209ENST00000635578 OR52N5Q8NH56 324 aa0.96□□□□□ -2.26
SMARCB1-209ENST00000635578 OLIG1Q8TAK6 271 aa0.96□□□□□ -2.26
SMARCB1-209ENST00000635578 ZNF519Q8TB69 540 aa0.96□□□□□ -2.26
SMARCB1-209ENST00000635578 MAPK15Q8TD08 544 aa0.96□□□□□ -2.26
SMARCB1-209ENST00000635578 PROX1Q92786 737 aa0.96□□□□□ -2.26
SMARCB1-209ENST00000635578 TSACCQ96A04 125 aaPredicted RBP0.96□□□□□ -2.26
SMARCB1-209ENST00000635578 DHX58Q96C10 678 aa0.96□□□□□ -2.26
SMARCB1-209ENST00000635578 RMDN1Q96DB5 314 aa0.96□□□□□ -2.26
SMARCB1-209ENST00000635578 OTUB1Q96FW1 271 aaPredicted RBP0.96□□□□□ -2.26
SMARCB1-209ENST00000635578 FAM71F1Q96KD3 344 aaPredicted RBP0.96□□□□□ -2.26
SMARCB1-209ENST00000635578 CNDP2Q96KP4 475 aaKnown RBP0.96□□□□□ -2.26
SMARCB1-209ENST00000635578 POM121L2Q96KW2 1035 aa0.96□□□□□ -2.26
SMARCB1-209ENST00000635578 SLC22A12Q96S37 553 aa0.96□□□□□ -2.26
SMARCB1-209ENST00000635578 TESK2Q96S53 571 aa0.96□□□□□ -2.26
SMARCB1-209ENST00000635578 ASCL2Q99929 193 aa0.96□□□□□ -2.26
SMARCB1-209ENST00000635578 SYT11Q9BT88 431 aa0.96□□□□□ -2.26
SMARCB1-209ENST00000635578 CENPOQ9BU64 300 aa0.96□□□□□ -2.26
SMARCB1-209ENST00000635578 MCRIP2Q9BUT9 160 aaKnown RBP0.96□□□□□ -2.26
SMARCB1-209ENST00000635578 PITPNM3Q9BZ71 974 aa0.96□□□□□ -2.26
SMARCB1-209ENST00000635578 OR2B2Q9GZK3 357 aa0.96□□□□□ -2.26
SMARCB1-209ENST00000635578 ZMYND12Q9H0C1 365 aa0.96□□□□□ -2.26
SMARCB1-209ENST00000635578 ARRDC1-AS1Q9H2J1 176 aa0.96□□□□□ -2.26
SMARCB1-209ENST00000635578 CPVLQ9H3G5 476 aa0.96□□□□□ -2.26
SMARCB1-209ENST00000635578 RABEP2Q9H5N1 569 aa0.96□□□□□ -2.26
SMARCB1-209ENST00000635578 NOL11Q9H8H0 719 aaKnown RBP0.96□□□□□ -2.26
SMARCB1-209ENST00000635578 TRPV4Q9HBA0 871 aa0.96□□□□□ -2.26
SMARCB1-209ENST00000635578 Q9N2K0 584 aa0.96□□□□□ -2.26
SMARCB1-209ENST00000635578 MYNNQ9NPC7 610 aa0.96□□□□□ -2.26
SMARCB1-209ENST00000635578 PFDN4Q9NQP4 134 aa0.96□□□□□ -2.26
SMARCB1-209ENST00000635578 OLAHQ9NV23 265 aa0.96□□□□□ -2.26
SMARCB1-209ENST00000635578 PRR34Q9NV39 138 aa0.96□□□□□ -2.26
SMARCB1-209ENST00000635578 PANK4Q9NVE7 773 aa0.96□□□□□ -2.26
SMARCB1-209ENST00000635578 TEX10Q9NXF1 929 aaPredicted RBP0.96□□□□□ -2.26
SMARCB1-209ENST00000635578 WSB2Q9NYS7 404 aaPredicted RBP0.96□□□□□ -2.26
SMARCB1-209ENST00000635578 GDE1Q9NZC3 331 aa0.96□□□□□ -2.26
SMARCB1-209ENST00000635578 BAIAP2L1Q9UHR4 511 aa0.96□□□□□ -2.26
SMARCB1-209ENST00000635578 GRID1Q9ULK0 1009 aa0.96□□□□□ -2.26
SMARCB1-209ENST00000635578 ABT1Q9ULW3 272 aaKnown RBP0.96□□□□□ -2.26
SMARCB1-209ENST00000635578 CHKBQ9Y259 395 aa0.96□□□□□ -2.26
SMARCB1-209ENST00000635578 WDR83OSQ9Y284 106 aa0.96□□□□□ -2.26
SMARCB1-209ENST00000635578 PPP2R2CQ9Y2T4 447 aa0.96□□□□□ -2.26
SMARCB1-209ENST00000635578 COLEC10Q9Y6Z7 277 aa0.96□□□□□ -2.26
SMARCB1-209ENST00000635578 TDRD6O60522 2096 aaKnown RBP0.96□□□□□ -2.26
SMARCB1-209ENST00000635578 PCM1Q15154 2024 aa0.96□□□□□ -2.26
SMARCB1-209ENST00000635578 PRRC2BQ5JSZ5 2229 aaKnown RBP0.96□□□□□ -2.26
SMARCB1-209ENST00000635578 RTL9Q8NET4 1388 aa0.96□□□□□ -2.26
SMARCB1-209ENST00000635578 ABCC4O15439 1325 aa0.95□□□□□ -2.26
SMARCB1-209ENST00000635578 PASKQ96RG2 1323 aa0.95□□□□□ -2.26
SMARCB1-209ENST00000635578 REV3LO60673 3130 aa0.95□□□□□ -2.26
SMARCB1-209ENST00000635578 IGKV6D-21A0A0A0MT36 114 aa0.95□□□□□ -2.26
SMARCB1-209ENST00000635578 TRBV4-1A0A0J9YWV2 114 aa0.95□□□□□ -2.26
SMARCB1-209ENST00000635578 URADA6NGE7 173 aa0.95□□□□□ -2.26
SMARCB1-209ENST00000635578 ASB14A6NK59 587 aa0.95□□□□□ -2.26
SMARCB1-209ENST00000635578 KPNA7A9QM74 516 aa0.95□□□□□ -2.26
SMARCB1-209ENST00000635578 SLCO1B7G3V0H7 640 aa0.95□□□□□ -2.26
SMARCB1-209ENST00000635578 TRIM77I1YAP6 450 aa0.95□□□□□ -2.26
SMARCB1-209ENST00000635578 CLDN4O14493 209 aa0.95□□□□□ -2.26
SMARCB1-209ENST00000635578 AP5Z1O43299 807 aa0.95□□□□□ -2.26
SMARCB1-209ENST00000635578 GLRA3O75311 464 aa0.95□□□□□ -2.26
SMARCB1-209ENST00000635578 CDK2AP2O75956 126 aa0.95□□□□□ -2.26
SMARCB1-209ENST00000635578 SLCO2B1O94956 709 aa0.95□□□□□ -2.26
SMARCB1-209ENST00000635578 LUC7L3O95232 432 aaKnown RBP0.95□□□□□ -2.26
SMARCB1-209ENST00000635578 CELF2O95319 508 aaKnown RBP0.95□□□□□ -2.26
SMARCB1-209ENST00000635578 SEC24AO95486 1093 aa0.95□□□□□ -2.26
SMARCB1-209ENST00000635578 NADKO95544 446 aaPredicted RBP0.95□□□□□ -2.26
SMARCB1-209ENST00000635578 C22orf31O95567 290 aa0.95□□□□□ -2.26
SMARCB1-209ENST00000635578 POP4O95707 220 aaKnown RBP0.95□□□□□ -2.26
SMARCB1-209ENST00000635578 WDPCPO95876 746 aa0.95□□□□□ -2.26
SMARCB1-209ENST00000635578 GSRP00390 522 aa0.95□□□□□ -2.26
SMARCB1-209ENST00000635578 PENKP01210 267 aaPredicted RBP0.95□□□□□ -2.26
SMARCB1-209ENST00000635578 ATP5BP06576 529 aaKnown RBP0.95□□□□□ -2.26
SMARCB1-209ENST00000635578 IGHV4-31P0DP07 118 aa0.95□□□□□ -2.26
SMARCB1-209ENST00000635578 SAGP10523 405 aaPredicted RBP0.95□□□□□ -2.26
SMARCB1-209ENST00000635578 HAPLN1P10915 354 aaPredicted RBP0.95□□□□□ -2.26
SMARCB1-209ENST00000635578 FDPSP14324 419 aaKnown RBP0.95□□□□□ -2.26
SMARCB1-209ENST00000635578 ACADSP16219 412 aa0.95□□□□□ -2.26
SMARCB1-209ENST00000635578 ACHEP22303 614 aa0.95□□□□□ -2.26
SMARCB1-209ENST00000635578 MPZP25189 248 aa0.95□□□□□ -2.26
SMARCB1-209ENST00000635578 EEF1DP29692 281 aaKnown RBP0.95□□□□□ -2.26
SMARCB1-209ENST00000635578 PDHA2P29803 388 aa0.95□□□□□ -2.26
SMARCB1-209ENST00000635578 CDC25CP30307 473 aa0.95□□□□□ -2.26
SMARCB1-209ENST00000635578 HSD17B3P37058 310 aa0.95□□□□□ -2.26
SMARCB1-209ENST00000635578 CAPGP40121 348 aa0.95□□□□□ -2.26
SMARCB1-209ENST00000635578 ASCL1P50553 236 aa0.95□□□□□ -2.26
SMARCB1-209ENST00000635578 SLC8A3P57103 927 aa0.95□□□□□ -2.26
SMARCB1-209ENST00000635578 GSDMDP57764 484 aa0.95□□□□□ -2.26
SMARCB1-209ENST00000635578 B3GALT5-AS1P59052 145 aa0.95□□□□□ -2.26
SMARCB1-209ENST00000635578 POLR2LP62875 67 aaKnown RBP0.95□□□□□ -2.26
SMARCB1-209ENST00000635578 DHODHQ02127 395 aa0.95□□□□□ -2.26
SMARCB1-209ENST00000635578 RBPJQ06330 500 aa0.95□□□□□ -2.26
SMARCB1-209ENST00000635578 MZT1Q08AG7 82 aa0.95□□□□□ -2.26
SMARCB1-209ENST00000635578 ACSM1Q08AH1 577 aa0.95□□□□□ -2.26
SMARCB1-209ENST00000635578 ILF2Q12905 390 aaKnown RBP0.95□□□□□ -2.26
SMARCB1-209ENST00000635578 CDH18Q13634 790 aa0.95□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms