RNA–Protein interactions for RNA: ENST00000629045.1

SCARNA4-201, small Cajal body-specific RNA 4, humanhuman

BASIC

Gene SCARNA4, Length 128 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA4-201ENST00000629045 TRAFD1O14545 582 aaPredicted RBP1.89□□□□□ -2.11
SCARNA4-201ENST00000629045 GALR3O60755 368 aaPredicted RBP1.89□□□□□ -2.11
SCARNA4-201ENST00000629045 MTRF1O75570 445 aaKnown RBP1.89□□□□□ -2.11
SCARNA4-201ENST00000629045 HPP00738 406 aa1.89□□□□□ -2.11
SCARNA4-201ENST00000629045 CALCAP01258 141 aa1.89□□□□□ -2.11
SCARNA4-201ENST00000629045 GBAP04062 536 aa1.89□□□□□ -2.11
SCARNA4-201ENST00000629045 ANKRD34CP0C6C1 535 aa1.89□□□□□ -2.11
SCARNA4-201ENST00000629045 SP9P0CG40 484 aa1.89□□□□□ -2.11
SCARNA4-201ENST00000629045 GP9P14770 177 aa1.89□□□□□ -2.11
SCARNA4-201ENST00000629045 CD1DP15813 335 aa1.89□□□□□ -2.11
SCARNA4-201ENST00000629045 PSMA3P25788 255 aa1.89□□□□□ -2.11
SCARNA4-201ENST00000629045 GIFP27352 417 aa1.89□□□□□ -2.11
SCARNA4-201ENST00000629045 PKLRP30613 574 aa1.89□□□□□ -2.11
SCARNA4-201ENST00000629045 CDX1P47902 265 aaPredicted RBP1.89□□□□□ -2.11
SCARNA4-201ENST00000629045 ZFP36L2P47974 494 aaKnown RBP1.89□□□□□ -2.11
SCARNA4-201ENST00000629045 GSK3BP49841 420 aa1.89□□□□□ -2.11
SCARNA4-201ENST00000629045 EVCP57679 992 aa1.89□□□□□ -2.11
SCARNA4-201ENST00000629045 ABCE1P61221 599 aaKnown RBP1.89□□□□□ -2.11
SCARNA4-201ENST00000629045 KNOP1Q1ED39 458 aaKnown RBP1.89□□□□□ -2.11
SCARNA4-201ENST00000629045 C15orf32Q32M92 178 aa1.89□□□□□ -2.11
SCARNA4-201ENST00000629045 FAM91A1Q658Y4 838 aa1.89□□□□□ -2.11
SCARNA4-201ENST00000629045 TXNRD3NBQ6F5E7 133 aa1.89□□□□□ -2.11
SCARNA4-201ENST00000629045 C17orf107Q6ZR85 190 aa1.89□□□□□ -2.11
SCARNA4-201ENST00000629045 TRMT11Q7Z4G4 463 aaKnown RBP1.89□□□□□ -2.11
SCARNA4-201ENST00000629045 CEACAM19Q7Z692 300 aa1.89□□□□□ -2.11
SCARNA4-201ENST00000629045 SLFN11Q7Z7L1 901 aa1.89□□□□□ -2.11
SCARNA4-201ENST00000629045 CARM1Q86X55 608 aa1.89□□□□□ -2.11
SCARNA4-201ENST00000629045 CATSPER3Q86XQ3 398 aa1.89□□□□□ -2.11
SCARNA4-201ENST00000629045 TDHQ8IZJ6 230 aa1.89□□□□□ -2.11
SCARNA4-201ENST00000629045 PRSS35Q8N3Z0 413 aa1.89□□□□□ -2.11
SCARNA4-201ENST00000629045 SUMF1Q8NBK3 374 aa1.89□□□□□ -2.11
SCARNA4-201ENST00000629045 NCOA7Q8NI08 942 aa1.89□□□□□ -2.11
SCARNA4-201ENST00000629045 TYMSOSQ8TAI1 123 aa1.89□□□□□ -2.11
SCARNA4-201ENST00000629045 SLC26A7Q8TE54 656 aa1.89□□□□□ -2.11
SCARNA4-201ENST00000629045 GRK7Q8WTQ7 553 aa1.89□□□□□ -2.11
SCARNA4-201ENST00000629045 RIT1Q92963 219 aa1.89□□□□□ -2.11
SCARNA4-201ENST00000629045 C11orf52Q96A22 123 aa1.89□□□□□ -2.11
SCARNA4-201ENST00000629045 LURAP1Q96LR2 239 aa1.89□□□□□ -2.11
SCARNA4-201ENST00000629045 C1orf147Q96MC9 270 aaPredicted RBP1.89□□□□□ -2.11
SCARNA4-201ENST00000629045 TAAR6Q96RI8 345 aa1.89□□□□□ -2.11
SCARNA4-201ENST00000629045 SERINC2Q96SA4 455 aa1.89□□□□□ -2.11
SCARNA4-201ENST00000629045 PAPOLGQ9BWT3 736 aaKnown RBP1.89□□□□□ -2.11
SCARNA4-201ENST00000629045 FNDC4Q9H6D8 234 aaPredicted RBP1.89□□□□□ -2.11
SCARNA4-201ENST00000629045 RPF1Q9H9Y2 349 aaKnown RBP1.89□□□□□ -2.11
SCARNA4-201ENST00000629045 ZNF346Q9UL40 294 aaKnown RBP1.89□□□□□ -2.11
SCARNA4-201ENST00000629045 RNF123Q5XPI4 1314 aa1.89□□□□□ -2.11
SCARNA4-201ENST00000629045 IGLV3-10A0A075B6K4 115 aa1.88□□□□□ -2.11
SCARNA4-201ENST00000629045 IGKV6D-41A0A0C4DH26 115 aa1.88□□□□□ -2.11
SCARNA4-201ENST00000629045 TRGV8A0A0C4DH27 118 aa1.88□□□□□ -2.11
SCARNA4-201ENST00000629045 TSPY2A6NKD2 308 aa1.88□□□□□ -2.11
SCARNA4-201ENST00000629045 ANHXE9PGG2 379 aa1.88□□□□□ -2.11
SCARNA4-201ENST00000629045 PDHXO00330 501 aa1.88□□□□□ -2.11
SCARNA4-201ENST00000629045 OGTO15294 1046 aa1.88□□□□□ -2.11
SCARNA4-201ENST00000629045 B4GAT1O43505 415 aa1.88□□□□□ -2.11
SCARNA4-201ENST00000629045 TNFSF12O43508 249 aa1.88□□□□□ -2.11
SCARNA4-201ENST00000629045 ACSL4O60488 711 aa1.88□□□□□ -2.11
SCARNA4-201ENST00000629045 ZNF354AO60765 605 aaPredicted RBP1.88□□□□□ -2.11
SCARNA4-201ENST00000629045 DKC1O60832 514 aaKnown RBP eCLIP1.88□□□□□ -2.11not detected■■■■■ 31.2
SCARNA4-201ENST00000629045 PRDM1O75626 825 aa1.88□□□□□ -2.11
SCARNA4-201ENST00000629045 APOA4P06727 396 aa1.88□□□□□ -2.11
SCARNA4-201ENST00000629045 AZU1P20160 251 aa1.88□□□□□ -2.11
SCARNA4-201ENST00000629045 CTNNA2P26232 953 aa1.88□□□□□ -2.11
SCARNA4-201ENST00000629045 FEN1P39748 380 aaKnown RBP1.88□□□□□ -2.11
SCARNA4-201ENST00000629045 CAPZA1P52907 286 aa1.88□□□□□ -2.11
SCARNA4-201ENST00000629045 PEX3P56589 373 aa1.88□□□□□ -2.11
SCARNA4-201ENST00000629045 ERVK-16P61578 105 aa1.88□□□□□ -2.11
SCARNA4-201ENST00000629045 SRPXP78539 464 aa1.88□□□□□ -2.11
SCARNA4-201ENST00000629045 FOLH1Q04609 750 aa1.88□□□□□ -2.11
SCARNA4-201ENST00000629045 GCKRQ14397 625 aa1.88□□□□□ -2.11
SCARNA4-201ENST00000629045 GRB14Q14449 540 aa1.88□□□□□ -2.11
SCARNA4-201ENST00000629045 MAPK11Q15759 364 aa1.88□□□□□ -2.11
SCARNA4-201ENST00000629045 RNF212Q495C1 297 aa1.88□□□□□ -2.11
SCARNA4-201ENST00000629045 DDX59Q5T1V6 619 aaKnown RBP eCLIP1.88□□□□□ -2.11
SCARNA4-201ENST00000629045 SHEQ5VZ18 495 aa1.88□□□□□ -2.11
SCARNA4-201ENST00000629045 LEMD1Q68G75 181 aa1.88□□□□□ -2.11
SCARNA4-201ENST00000629045 ZNF770Q6IQ21 691 aaPredicted RBP1.88□□□□□ -2.11
SCARNA4-201ENST00000629045 KLHL10Q6JEL2 608 aa1.88□□□□□ -2.11
SCARNA4-201ENST00000629045 MACC1Q6ZN28 852 aa1.88□□□□□ -2.11
SCARNA4-201ENST00000629045 Q6ZR54 194 aa1.88□□□□□ -2.11
SCARNA4-201ENST00000629045 SPATA21Q7Z572 469 aa1.88□□□□□ -2.11
SCARNA4-201ENST00000629045 GPR141Q7Z602 305 aa1.88□□□□□ -2.11
SCARNA4-201ENST00000629045 CREBRFQ8IUR6 639 aa1.88□□□□□ -2.11
SCARNA4-201ENST00000629045 ZNF584Q8IVC4 421 aa1.88□□□□□ -2.11
SCARNA4-201ENST00000629045 PHC2Q8IXK0 858 aa1.88□□□□□ -2.11
SCARNA4-201ENST00000629045 C11orf53Q8IXP5 236 aa1.88□□□□□ -2.11
SCARNA4-201ENST00000629045 CCDC185Q8N715 623 aa1.88□□□□□ -2.11
SCARNA4-201ENST00000629045 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP1.88□□□□□ -2.11
SCARNA4-201ENST00000629045 SMYD1Q8NB12 490 aa1.88□□□□□ -2.11
SCARNA4-201ENST00000629045 ZPLD1Q8TCW7 415 aa1.88□□□□□ -2.11
SCARNA4-201ENST00000629045 ERP27Q96DN0 273 aa1.88□□□□□ -2.11
SCARNA4-201ENST00000629045 BSCL2Q96G97 398 aaPredicted RBP1.88□□□□□ -2.11
SCARNA4-201ENST00000629045 AK8Q96MA6 479 aa1.88□□□□□ -2.11
SCARNA4-201ENST00000629045 PCDHB18PQ96TA0 734 aa1.88□□□□□ -2.11
SCARNA4-201ENST00000629045 BAG1Q99933 345 aaPredicted RBP1.88□□□□□ -2.11
SCARNA4-201ENST00000629045 INPP5KQ9BT40 448 aa1.88□□□□□ -2.11
SCARNA4-201ENST00000629045 AP1M1Q9BXS5 423 aa1.88□□□□□ -2.11
SCARNA4-201ENST00000629045 KCNK13Q9HB14 408 aa1.88□□□□□ -2.11
SCARNA4-201ENST00000629045 PFDN4Q9NQP4 134 aa1.88□□□□□ -2.11
SCARNA4-201ENST00000629045 MRGBPQ9NV56 204 aa1.88□□□□□ -2.11
SCARNA4-201ENST00000629045 TERF2IPQ9NYB0 399 aa1.88□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms