RNA–Protein interactions for RNA: ENST00000623466.1

PCDHB17P-202, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 3,066 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-202ENST00000623466 PIK3R3Q92569 461 aa12.9□□□□□ -0.34
PCDHB17P-202ENST00000623466 UQCC2Q9BRT2 126 aa12.9□□□□□ -0.34
PCDHB17P-202ENST00000623466 EBPLQ9BY08 206 aa12.9□□□□□ -0.34
PCDHB17P-202ENST00000623466 IL1RAPQ9NPH3 570 aa12.9□□□□□ -0.34
PCDHB17P-202ENST00000623466 NDRG4Q9ULP0 352 aaKnown RBP12.9□□□□□ -0.34
PCDHB17P-202ENST00000623466 EPN2O95208 641 aa12.9□□□□□ -0.34
PCDHB17P-202ENST00000623466 DGKAP23743 735 aa12.9□□□□□ -0.34
PCDHB17P-202ENST00000623466 PTPN6P29350 595 aa12.9□□□□□ -0.34
PCDHB17P-202ENST00000623466 PBLDP30039 288 aaPredicted RBP12.9□□□□□ -0.34
PCDHB17P-202ENST00000623466 PKLRP30613 574 aa12.9□□□□□ -0.34
PCDHB17P-202ENST00000623466 GRK3P35626 688 aa12.9□□□□□ -0.34
PCDHB17P-202ENST00000623466 DSTNP60981 165 aa12.9□□□□□ -0.34
PCDHB17P-202ENST00000623466 TAGLNQ01995 201 aaKnown RBP12.9□□□□□ -0.34
PCDHB17P-202ENST00000623466 ABRQ12979 859 aa12.9□□□□□ -0.34
PCDHB17P-202ENST00000623466 TP53BP2Q13625 1128 aa12.9□□□□□ -0.34
PCDHB17P-202ENST00000623466 DDX39BQ13838 428 aaKnown RBP12.9□□□□□ -0.34
PCDHB17P-202ENST00000623466 LILRA6Q6PI73 481 aa12.9□□□□□ -0.34
PCDHB17P-202ENST00000623466 FBXO46Q6PJ61 603 aaPredicted RBP12.9□□□□□ -0.34
PCDHB17P-202ENST00000623466 SFTPA1Q8IWL2 248 aa12.9□□□□□ -0.34
PCDHB17P-202ENST00000623466 SVOPQ8N4V2 548 aa12.9□□□□□ -0.34
PCDHB17P-202ENST00000623466 CELF2-AS1Q8N7Q2 184 aa12.9□□□□□ -0.34
PCDHB17P-202ENST00000623466 GLB1L3Q8NCI6 653 aaPredicted RBP12.9□□□□□ -0.34
PCDHB17P-202ENST00000623466 FLCNQ8NFG4 579 aa12.9□□□□□ -0.34
PCDHB17P-202ENST00000623466 APH1BQ8WW43 257 aa12.9□□□□□ -0.34
PCDHB17P-202ENST00000623466 SCRN2Q96FV2 425 aa12.9□□□□□ -0.34
PCDHB17P-202ENST00000623466 NOTCH4Q99466 2003 aa12.9□□□□□ -0.34
PCDHB17P-202ENST00000623466 COPS8Q99627 209 aa12.9□□□□□ -0.34
PCDHB17P-202ENST00000623466 COPS4Q9BT78 406 aa12.9□□□□□ -0.34
PCDHB17P-202ENST00000623466 CD244Q9BZW8 370 aa12.9□□□□□ -0.34
PCDHB17P-202ENST00000623466 GON4LQ3T8J9 2241 aa12.9□□□□□ -0.34
PCDHB17P-202ENST00000623466 M0R082 166 aa12.9□□□□□ -0.35
PCDHB17P-202ENST00000623466 SLC28A1O00337 649 aa12.9□□□□□ -0.35
PCDHB17P-202ENST00000623466 ERN1O75460 977 aaKnown RBP12.9□□□□□ -0.35
PCDHB17P-202ENST00000623466 SEMA3DO95025 777 aa12.9□□□□□ -0.35
PCDHB17P-202ENST00000623466 TIMP1P01033 207 aa12.9□□□□□ -0.35
PCDHB17P-202ENST00000623466 HSMCR30P0CW71 290 aa12.9□□□□□ -0.35
PCDHB17P-202ENST00000623466 SYN1P17600 705 aa12.9□□□□□ -0.35
PCDHB17P-202ENST00000623466 CASP9P55211 416 aa12.9□□□□□ -0.35
PCDHB17P-202ENST00000623466 KIAA1614Q5VZ46 1190 aa12.9□□□□□ -0.35
PCDHB17P-202ENST00000623466 CERS6Q6ZMG9 384 aa12.9□□□□□ -0.35
PCDHB17P-202ENST00000623466 ZNF783Q6ZMS7 281 aa12.9□□□□□ -0.35
PCDHB17P-202ENST00000623466 PRSS48Q7RTY5 328 aa12.9□□□□□ -0.35
PCDHB17P-202ENST00000623466 HSD11B1LQ7Z5J1 315 aa12.9□□□□□ -0.35
PCDHB17P-202ENST00000623466 PLPP6Q8IY26 295 aa12.9□□□□□ -0.35
PCDHB17P-202ENST00000623466 ENTHD1Q8IYW4 607 aa12.9□□□□□ -0.35
PCDHB17P-202ENST00000623466 LINC00469Q8N7U9 141 aa12.9□□□□□ -0.35
PCDHB17P-202ENST00000623466 LRRC3BQ96PB8 259 aa12.9□□□□□ -0.35
PCDHB17P-202ENST00000623466 SNX18Q96RF0 628 aa12.9□□□□□ -0.35
PCDHB17P-202ENST00000623466 OR51E2Q9H255 320 aa12.9□□□□□ -0.35
PCDHB17P-202ENST00000623466 PCDHB1Q9Y5F3 818 aa12.9□□□□□ -0.35
PCDHB17P-202ENST00000623466 PABPN1LA6NDY0 278 aaKnown RBP12.89□□□□□ -0.35
PCDHB17P-202ENST00000623466 AGAP5A6NIR3 686 aa12.89□□□□□ -0.35
PCDHB17P-202ENST00000623466 PDZK1P1A8MUH7 402 aa12.89□□□□□ -0.35
PCDHB17P-202ENST00000623466 LEFTY1O75610 366 aa12.89□□□□□ -0.35
PCDHB17P-202ENST00000623466 RHOP08100 348 aa12.89□□□□□ -0.35
PCDHB17P-202ENST00000623466 C1SP09871 688 aa12.89□□□□□ -0.35
PCDHB17P-202ENST00000623466 MAGEA2P43356 314 aa12.89□□□□□ -0.35
PCDHB17P-202ENST00000623466 CDC20Q12834 499 aa12.89□□□□□ -0.35
PCDHB17P-202ENST00000623466 NPRL3Q12980 569 aa12.89□□□□□ -0.35
PCDHB17P-202ENST00000623466 MAD2L1Q13257 205 aaPredicted RBP12.89□□□□□ -0.35
PCDHB17P-202ENST00000623466 KEAP1Q14145 624 aa12.89□□□□□ -0.35
PCDHB17P-202ENST00000623466 TCEAL5Q5H9L2 206 aa12.89□□□□□ -0.35
PCDHB17P-202ENST00000623466 TPRG1LQ5T0D9 272 aa12.89□□□□□ -0.35
PCDHB17P-202ENST00000623466 ZNF621Q6ZSS3 439 aa12.89□□□□□ -0.35
PCDHB17P-202ENST00000623466 TPRG1Q6ZUI0 275 aa12.89□□□□□ -0.35
PCDHB17P-202ENST00000623466 P3H2Q8IVL5 708 aa12.89□□□□□ -0.35
PCDHB17P-202ENST00000623466 SELENOMQ8WWX9 145 aa12.89□□□□□ -0.35
PCDHB17P-202ENST00000623466 APOLD1Q96LR9 279 aa12.89□□□□□ -0.35
PCDHB17P-202ENST00000623466 Q96MT0 163 aa12.89□□□□□ -0.35
PCDHB17P-202ENST00000623466 ITPAQ9BY32 194 aa12.89□□□□□ -0.35
PCDHB17P-202ENST00000623466 KCNH6Q9H252 994 aa12.89□□□□□ -0.35
PCDHB17P-202ENST00000623466 RNF6Q9Y252 685 aa12.89□□□□□ -0.35
PCDHB17P-202ENST00000623466 SLC22A14Q9Y267 594 aa12.89□□□□□ -0.35
PCDHB17P-202ENST00000623466 TRIOO75962 3097 aa12.89□□□□□ -0.35
PCDHB17P-202ENST00000623466 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.89□□□□□ -0.35
PCDHB17P-202ENST00000623466 CPSF4O95639 269 aaKnown RBP12.89□□□□□ -0.35
PCDHB17P-202ENST00000623466 FABP3P05413 133 aa12.89□□□□□ -0.35
PCDHB17P-202ENST00000623466 EPB42P16452 691 aa12.89□□□□□ -0.35
PCDHB17P-202ENST00000623466 DNAJA1P31689 397 aaKnown RBP12.89□□□□□ -0.35
PCDHB17P-202ENST00000623466 SLC19A1P41440 591 aa12.89□□□□□ -0.35
PCDHB17P-202ENST00000623466 SLC7A9P82251 487 aa12.89□□□□□ -0.35
PCDHB17P-202ENST00000623466 COL9A2Q14055 689 aaPredicted RBP12.89□□□□□ -0.35
PCDHB17P-202ENST00000623466 CCSMST1Q4G0I0 132 aa12.89□□□□□ -0.35
PCDHB17P-202ENST00000623466 CCBE1Q6UXH8 406 aaPredicted RBP12.89□□□□□ -0.35
PCDHB17P-202ENST00000623466 UBE2R2Q712K3 238 aaPredicted RBP12.89□□□□□ -0.35
PCDHB17P-202ENST00000623466 TSPYL5Q86VY4 417 aaPredicted RBP12.89□□□□□ -0.35
PCDHB17P-202ENST00000623466 OR52E4Q8NGH9 312 aa12.89□□□□□ -0.35
PCDHB17P-202ENST00000623466 OR2A12Q8NGT7 310 aa12.89□□□□□ -0.35
PCDHB17P-202ENST00000623466 SLC38A4Q969I6 547 aa12.89□□□□□ -0.35
PCDHB17P-202ENST00000623466 APIPQ96GX9 242 aa12.89□□□□□ -0.35
PCDHB17P-202ENST00000623466 HSH2DQ96JZ2 352 aa12.89□□□□□ -0.35
PCDHB17P-202ENST00000623466 BCL7BQ9BQE9 202 aa12.89□□□□□ -0.35
PCDHB17P-202ENST00000623466 ROGDIQ9GZN7 287 aa12.89□□□□□ -0.35
PCDHB17P-202ENST00000623466 REXO4Q9GZR2 422 aaKnown RBP12.89□□□□□ -0.35
PCDHB17P-202ENST00000623466 TM9SF3Q9HD45 589 aa12.89□□□□□ -0.35
PCDHB17P-202ENST00000623466 TDP1Q9NUW8 608 aa12.89□□□□□ -0.35
PCDHB17P-202ENST00000623466 THUMPD1Q9NXG2 353 aaKnown RBP12.89□□□□□ -0.35
PCDHB17P-202ENST00000623466 METTL15A6NJ78 407 aa12.88□□□□□ -0.35
PCDHB17P-202ENST00000623466 DSCR3O14972 297 aa12.88□□□□□ -0.35
PCDHB17P-202ENST00000623466 ADH1AP07327 375 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms