RNA–Protein interactions for RNA: ENST00000622960.1

ATRX-208, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 5

Gene ATRX, Length 628 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-208ENST00000622960 SUPT3HB4E1H0 165 aa12.3□□□□□ -0.44
ATRX-208ENST00000622960 ERI3O43414 337 aaKnown RBP12.3□□□□□ -0.44
ATRX-208ENST00000622960 B3GALT2O43825 422 aa12.3□□□□□ -0.44
ATRX-208ENST00000622960 CCNT2O60583 730 aaKnown RBP12.3□□□□□ -0.44
ATRX-208ENST00000622960 PRAMEF2O60811 474 aa12.3□□□□□ -0.44
ATRX-208ENST00000622960 SUPT3HO75486 399 aa12.3□□□□□ -0.44
ATRX-208ENST00000622960 RASAL1O95294 804 aa12.3□□□□□ -0.44
ATRX-208ENST00000622960 WDPCPO95876 746 aa12.3□□□□□ -0.44
ATRX-208ENST00000622960 F10P00742 488 aa12.3□□□□□ -0.44
ATRX-208ENST00000622960 CELA2AP08217 269 aa12.3□□□□□ -0.44
ATRX-208ENST00000622960 CD1DP15813 335 aa12.3□□□□□ -0.44
ATRX-208ENST00000622960 GDF5P43026 501 aa12.3□□□□□ -0.44
ATRX-208ENST00000622960 RHAGQ02094 409 aa12.3□□□□□ -0.44
ATRX-208ENST00000622960 WHAMMP3Q1A5X7 153 aa12.3□□□□□ -0.44
ATRX-208ENST00000622960 ZXDCQ2QGD7 858 aaPredicted RBP12.3□□□□□ -0.44
ATRX-208ENST00000622960 XKR6Q5GH73 641 aa12.3□□□□□ -0.44
ATRX-208ENST00000622960 KLC3Q6P597 504 aa12.3□□□□□ -0.44
ATRX-208ENST00000622960 QSOX2Q6ZRP7 698 aa12.3□□□□□ -0.44
ATRX-208ENST00000622960 TAOK1Q7L7X3 1001 aa12.3□□□□□ -0.44
ATRX-208ENST00000622960 LRRC70Q7Z2Q7 622 aa12.3□□□□□ -0.44
ATRX-208ENST00000622960 ZNF572Q7Z3I7 529 aaPredicted RBP12.3□□□□□ -0.44
ATRX-208ENST00000622960 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.3□□□□□ -0.44
ATRX-208ENST00000622960 KLHDC8AQ8IYD2 350 aa12.3□□□□□ -0.44
ATRX-208ENST00000622960 SPATA6LQ8N4H0 392 aa12.3□□□□□ -0.44
ATRX-208ENST00000622960 ANKRD53Q8N9V6 530 aa12.3□□□□□ -0.44
ATRX-208ENST00000622960 PLPP5Q8NEB5 264 aa12.3□□□□□ -0.44
ATRX-208ENST00000622960 CATSPER1Q8NEC5 780 aa12.3□□□□□ -0.44
ATRX-208ENST00000622960 MNS1Q8NEH6 495 aa12.3□□□□□ -0.44
ATRX-208ENST00000622960 FBF1Q8TES7 1133 aa12.3□□□□□ -0.44
ATRX-208ENST00000622960 PSMF1Q92530 271 aa12.3□□□□□ -0.44
ATRX-208ENST00000622960 UBE2E3Q969T4 207 aa12.3□□□□□ -0.44
ATRX-208ENST00000622960 PTCD3Q96EY7 689 aaKnown RBP12.3□□□□□ -0.44
ATRX-208ENST00000622960 PTCHD1Q96NR3 888 aa12.3□□□□□ -0.44
ATRX-208ENST00000622960 UTP23Q9BRU9 249 aaKnown RBP12.3□□□□□ -0.44
ATRX-208ENST00000622960 SPNS1Q9H2V7 528 aa12.3□□□□□ -0.44
ATRX-208ENST00000622960 EHD1Q9H4M9 534 aa12.3□□□□□ -0.44
ATRX-208ENST00000622960 MMP25Q9NPA2 562 aa12.3□□□□□ -0.44
ATRX-208ENST00000622960 PRDM9Q9NQV7 894 aa12.3□□□□□ -0.44
ATRX-208ENST00000622960 NUDT4Q9NZJ9 180 aa12.3□□□□□ -0.44
ATRX-208ENST00000622960 NBASA2RRP1 2371 aa12.3□□□□□ -0.44
ATRX-208ENST00000622960 DOCK10Q96BY6 2186 aa12.29□□□□□ -0.44
ATRX-208ENST00000622960 SHANK1Q9Y566 2161 aa12.29□□□□□ -0.44
ATRX-208ENST00000622960 A0A087X1B8 175 aa12.29□□□□□ -0.44
ATRX-208ENST00000622960 CLDN4O14493 209 aa12.29□□□□□ -0.44
ATRX-208ENST00000622960 SEMA7AO75326 666 aa12.29□□□□□ -0.44
ATRX-208ENST00000622960 CLEC3AO75596 197 aa12.29□□□□□ -0.44
ATRX-208ENST00000622960 LTA4HP09960 611 aaKnown RBP12.29□□□□□ -0.44
ATRX-208ENST00000622960 GGT5P36269 586 aa12.29□□□□□ -0.44
ATRX-208ENST00000622960 HSPA7P48741 367 aa12.29□□□□□ -0.44
ATRX-208ENST00000622960 GPX6P59796 221 aa12.29□□□□□ -0.44
ATRX-208ENST00000622960 BTN3A2P78410 334 aa12.29□□□□□ -0.44
ATRX-208ENST00000622960 OC90Q02509 493 aaPredicted RBP12.29□□□□□ -0.44
ATRX-208ENST00000622960 IRF8Q02556 426 aa12.29□□□□□ -0.44
ATRX-208ENST00000622960 RBPJQ06330 500 aa12.29□□□□□ -0.44
ATRX-208ENST00000622960 SRSF1Q07955 248 aaKnown RBP eCLIP12.29□□□□□ -0.44
ATRX-208ENST00000622960 ZKSCAN8Q15776 578 aaPredicted RBP12.29□□□□□ -0.44
ATRX-208ENST00000622960 UAP1Q16222 522 aaPredicted RBP12.29□□□□□ -0.44
ATRX-208ENST00000622960 FAM83EQ2M2I3 478 aa12.29□□□□□ -0.44
ATRX-208ENST00000622960 ACER2Q5QJU3 275 aa12.29□□□□□ -0.44
ATRX-208ENST00000622960 SLCO4C1Q6ZQN7 724 aa12.29□□□□□ -0.44
ATRX-208ENST00000622960 BEST3Q8N1M1 668 aa12.29□□□□□ -0.44
ATRX-208ENST00000622960 TMEM178AQ8NBL3 297 aa12.29□□□□□ -0.44
ATRX-208ENST00000622960 PDPRQ8NCN5 879 aa12.29□□□□□ -0.44
ATRX-208ENST00000622960 SRFBP1Q8NEF9 429 aaKnown RBP12.29□□□□□ -0.44
ATRX-208ENST00000622960 ZNF592Q92610 1267 aa12.29□□□□□ -0.44
ATRX-208ENST00000622960 TSLPQ969D9 159 aa12.29□□□□□ -0.44
ATRX-208ENST00000622960 KIAA1191Q96A73 305 aa12.29□□□□□ -0.44
ATRX-208ENST00000622960 PSMG3-AS1Q96PY0 264 aa12.29□□□□□ -0.44
ATRX-208ENST00000622960 BARD1Q99728 777 aaKnown RBP12.29□□□□□ -0.44
ATRX-208ENST00000622960 MCMBPQ9BTE3 642 aa12.29□□□□□ -0.44
ATRX-208ENST00000622960 NPLQ9BXD5 320 aaPredicted RBP12.29□□□□□ -0.44
ATRX-208ENST00000622960 ROGDIQ9GZN7 287 aa12.29□□□□□ -0.44
ATRX-208ENST00000622960 NT5DC2Q9H857 520 aa12.29□□□□□ -0.44
ATRX-208ENST00000622960 LANCL2Q9NS86 450 aa12.29□□□□□ -0.44
ATRX-208ENST00000622960 OPTCQ9UBM4 332 aa12.29□□□□□ -0.44
ATRX-208ENST00000622960 PLEKHB1Q9UF11 243 aaPredicted RBP12.29□□□□□ -0.44
ATRX-208ENST00000622960 NTNG1Q9Y2I2 539 aa12.29□□□□□ -0.44
ATRX-208ENST00000622960 ACOT9Q9Y305 439 aa12.29□□□□□ -0.44
ATRX-208ENST00000622960 ANGPTL3Q9Y5C1 460 aa12.29□□□□□ -0.44
ATRX-208ENST00000622960 IKBKGQ9Y6K9 419 aa12.29□□□□□ -0.44
ATRX-208ENST00000622960 SPACA6W5XKT8 324 aa12.29□□□□□ -0.44
ATRX-208ENST00000622960 HECTD1Q9ULT8 2610 aa12.28□□□□□ -0.44
ATRX-208ENST00000622960 CPAMD8Q8IZJ3 1885 aa12.28□□□□□ -0.44
ATRX-208ENST00000622960 FCHO1O14526 889 aa12.28□□□□□ -0.44
ATRX-208ENST00000622960 CD46P15529 392 aa12.28□□□□□ -0.44
ATRX-208ENST00000622960 TFEBP19484 476 aa12.28□□□□□ -0.44
ATRX-208ENST00000622960 SERPINB1P30740 379 aa12.28□□□□□ -0.44
ATRX-208ENST00000622960 SLC26A5P58743 744 aa12.28□□□□□ -0.44
ATRX-208ENST00000622960 SNRPNP63162 240 aaKnown RBP12.28□□□□□ -0.44
ATRX-208ENST00000622960 PHEXP78562 749 aa12.28□□□□□ -0.44
ATRX-208ENST00000622960 GUCY2DQ02846 1103 aa12.28□□□□□ -0.44
ATRX-208ENST00000622960 ZNF766Q5HY98 468 aa12.28□□□□□ -0.44
ATRX-208ENST00000622960 LGI4Q8N135 537 aa12.28□□□□□ -0.44
ATRX-208ENST00000622960 OR2L5Q8NG80 312 aa12.28□□□□□ -0.44
ATRX-208ENST00000622960 DNAJB8Q8NHS0 232 aa12.28□□□□□ -0.44
ATRX-208ENST00000622960 TRIM44Q96DX7 344 aaPredicted RBP12.28□□□□□ -0.44
ATRX-208ENST00000622960 UBXN10Q96LJ8 280 aa12.28□□□□□ -0.44
ATRX-208ENST00000622960 CENPKQ9BS16 269 aa12.28□□□□□ -0.44
ATRX-208ENST00000622960 TMEM79Q9BSE2 394 aa12.28□□□□□ -0.44
ATRX-208ENST00000622960 REXO4Q9GZR2 422 aaKnown RBP12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms