RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 Q6ZR54 194 aa3.49□□□□□ -1.85
BRCA1-229ENST00000621897 ZBTB49Q6ZSB9 765 aa3.49□□□□□ -1.85
BRCA1-229ENST00000621897 CCDC186Q7Z3E2 898 aa3.49□□□□□ -1.85
BRCA1-229ENST00000621897 CENPVQ7Z7K6 275 aaPredicted RBP3.49□□□□□ -1.85
BRCA1-229ENST00000621897 METTL23Q86XA0 190 aa3.49□□□□□ -1.85
BRCA1-229ENST00000621897 MAML2Q8IZL2 1156 aaPredicted RBP3.49□□□□□ -1.85
BRCA1-229ENST00000621897 SLC39A11Q8N1S5 342 aa3.49□□□□□ -1.85
BRCA1-229ENST00000621897 Q8NFD4 153 aa3.49□□□□□ -1.85
BRCA1-229ENST00000621897 KIAA1524Q8TCG1 905 aa3.49□□□□□ -1.85
BRCA1-229ENST00000621897 ANKRD49Q8WVL7 239 aa3.49□□□□□ -1.85
BRCA1-229ENST00000621897 SHC3Q92529 594 aa3.49□□□□□ -1.85
BRCA1-229ENST00000621897 FAM162AQ96A26 154 aa3.49□□□□□ -1.85
BRCA1-229ENST00000621897 CFAP36Q96G28 342 aa3.49□□□□□ -1.85
BRCA1-229ENST00000621897 TCHPQ9BT92 498 aa3.49□□□□□ -1.85
BRCA1-229ENST00000621897 RPP25Q9BUL9 199 aaKnown RBP3.49□□□□□ -1.85
BRCA1-229ENST00000621897 FUT8Q9BYC5 575 aa3.49□□□□□ -1.85
BRCA1-229ENST00000621897 PARLQ9H300 379 aa3.49□□□□□ -1.85
BRCA1-229ENST00000621897 THAP9Q9H5L6 903 aa3.49□□□□□ -1.85
BRCA1-229ENST00000621897 EGLN3Q9H6Z9 239 aa3.49□□□□□ -1.85
BRCA1-229ENST00000621897 DNAJC4Q9NNZ3 241 aa3.49□□□□□ -1.85
BRCA1-229ENST00000621897 MID1IP1Q9NPA3 183 aa3.49□□□□□ -1.85
BRCA1-229ENST00000621897 RBM28Q9NW13 759 aaKnown RBP3.49□□□□□ -1.85
BRCA1-229ENST00000621897 TAS2R3Q9NYW6 316 aa3.49□□□□□ -1.85
BRCA1-229ENST00000621897 TRAF3IP3Q9Y228 551 aa3.49□□□□□ -1.85
BRCA1-229ENST00000621897 AP1M2Q9Y6Q5 423 aa3.49□□□□□ -1.85
BRCA1-229ENST00000621897 FAM169AQ9Y6X4 670 aa3.49□□□□□ -1.85
BRCA1-229ENST00000621897 OBSCNQ5VST9 7968 aa3.48□□□□□ -1.85
BRCA1-229ENST00000621897 UNC13AQ9UPW8 1703 aa3.48□□□□□ -1.85
BRCA1-229ENST00000621897 A0A0U1RQK1 487 aa3.48□□□□□ -1.85
BRCA1-229ENST00000621897 EDDM13A0A1B0GTR0 161 aa3.48□□□□□ -1.85
BRCA1-229ENST00000621897 TCRBV21S2A2A0A5A6 115 aa3.48□□□□□ -1.85
BRCA1-229ENST00000621897 CLRN2A0PK11 232 aa3.48□□□□□ -1.85
BRCA1-229ENST00000621897 ZNF320A2RRD8 509 aa3.48□□□□□ -1.85
BRCA1-229ENST00000621897 H0YC42 278 aa3.48□□□□□ -1.85
BRCA1-229ENST00000621897 K7EPI3 171 aa3.48□□□□□ -1.85
BRCA1-229ENST00000621897 K7EQD1 137 aa3.48□□□□□ -1.85
BRCA1-229ENST00000621897 M0QX08 132 aa3.48□□□□□ -1.85
BRCA1-229ENST00000621897 TFECO14948 347 aaPredicted RBP3.48□□□□□ -1.85
BRCA1-229ENST00000621897 MCF2LO15068 1137 aa3.48□□□□□ -1.85
BRCA1-229ENST00000621897 WDR46O15213 610 aaKnown RBP3.48□□□□□ -1.85
BRCA1-229ENST00000621897 STX6O43752 255 aa3.48□□□□□ -1.85
BRCA1-229ENST00000621897 E2F6O75461 281 aa3.48□□□□□ -1.85
BRCA1-229ENST00000621897 ATP6AP2O75787 350 aa3.48□□□□□ -1.85
BRCA1-229ENST00000621897 PSMD10O75832 226 aa3.48□□□□□ -1.85
BRCA1-229ENST00000621897 OLFM2O95897 454 aa3.48□□□□□ -1.85
BRCA1-229ENST00000621897 GSRP00390 522 aa3.48□□□□□ -1.85
BRCA1-229ENST00000621897 PNPP00491 289 aa3.48□□□□□ -1.85
BRCA1-229ENST00000621897 HOXD4P09016 255 aaPredicted RBP3.48□□□□□ -1.85
BRCA1-229ENST00000621897 SAGP10523 405 aaPredicted RBP3.48□□□□□ -1.85
BRCA1-229ENST00000621897 EPCAMP16422 314 aa3.48□□□□□ -1.85
BRCA1-229ENST00000621897 BCL3P20749 454 aa3.48□□□□□ -1.85
BRCA1-229ENST00000621897 KRTAP5-9P26371 169 aa3.48□□□□□ -1.85
BRCA1-229ENST00000621897 OXTRP30559 389 aa3.48□□□□□ -1.85
BRCA1-229ENST00000621897 GP5P40197 560 aa3.48□□□□□ -1.85
BRCA1-229ENST00000621897 IFNAR2P48551 515 aa3.48□□□□□ -1.85
BRCA1-229ENST00000621897 LMAN1P49257 510 aa3.48□□□□□ -1.85
BRCA1-229ENST00000621897 ASCL1P50553 236 aa3.48□□□□□ -1.85
BRCA1-229ENST00000621897 SNTB1Q13884 538 aaKnown RBP3.48□□□□□ -1.85
BRCA1-229ENST00000621897 PTPRCAPQ14761 206 aa3.48□□□□□ -1.85
BRCA1-229ENST00000621897 LASP1Q14847 261 aaKnown RBP3.48□□□□□ -1.85
BRCA1-229ENST00000621897 TRADDQ15628 312 aa3.48□□□□□ -1.85
BRCA1-229ENST00000621897 KRBOX4Q5JUW0 171 aa3.48□□□□□ -1.85
BRCA1-229ENST00000621897 OR4C11Q6IEV9 310 aa3.48□□□□□ -1.85
BRCA1-229ENST00000621897 SHQ1Q6PI26 577 aaKnown RBP3.48□□□□□ -1.85
BRCA1-229ENST00000621897 FCRLAQ7L513 359 aa3.48□□□□□ -1.85
BRCA1-229ENST00000621897 LPCAT2Q7L5N7 544 aa3.48□□□□□ -1.85
BRCA1-229ENST00000621897 CHMP1BQ7LBR1 199 aa3.48□□□□□ -1.85
BRCA1-229ENST00000621897 FAM131BQ86XD5 332 aa3.48□□□□□ -1.85
BRCA1-229ENST00000621897 DZIP1Q86YF9 867 aaKnown RBP3.48□□□□□ -1.85
BRCA1-229ENST00000621897 FAM89BQ8N5H3 189 aa3.48□□□□□ -1.85
BRCA1-229ENST00000621897 RASGEF1AQ8N9B8 481 aa3.48□□□□□ -1.85
BRCA1-229ENST00000621897 TDRD5Q8NAT2 981 aaKnown RBP3.48□□□□□ -1.85
BRCA1-229ENST00000621897 SLC4A11Q8NBS3 891 aa3.48□□□□□ -1.85
BRCA1-229ENST00000621897 OR5T2Q8NGG2 359 aa3.48□□□□□ -1.85
BRCA1-229ENST00000621897 KCNE4Q8WWG9 221 aa3.48□□□□□ -1.85
BRCA1-229ENST00000621897 OTUB1Q96FW1 271 aaPredicted RBP3.48□□□□□ -1.85
BRCA1-229ENST00000621897 KLHL5Q96PQ7 755 aa3.48□□□□□ -1.85
BRCA1-229ENST00000621897 THUMPD3Q9BV44 507 aaKnown RBP3.48□□□□□ -1.85
BRCA1-229ENST00000621897 ACTR3BQ9P1U1 418 aa3.48□□□□□ -1.85
BRCA1-229ENST00000621897 C5AR2Q9P296 337 aa3.48□□□□□ -1.85
BRCA1-229ENST00000621897 PRDM4Q9UKN5 801 aa3.48□□□□□ -1.85
BRCA1-229ENST00000621897 CFAP45Q9UL16 551 aa3.48□□□□□ -1.85
BRCA1-229ENST00000621897 CAB39Q9Y376 341 aaPredicted RBP3.48□□□□□ -1.85
BRCA1-229ENST00000621897 ZNF646O15015 1829 aaPredicted RBP3.48□□□□□ -1.85
BRCA1-229ENST00000621897 IGSF1Q8N6C5 1336 aa3.47□□□□□ -1.85
BRCA1-229ENST00000621897 IGLV3-10A0A075B6K4 115 aa3.47□□□□□ -1.85
BRCA1-229ENST00000621897 IGHV4-30-2A0A087WSY4 118 aa3.47□□□□□ -1.85
BRCA1-229ENST00000621897 MTMR11A4FU01 709 aa3.47□□□□□ -1.85
BRCA1-229ENST00000621897 RGSL1A5PLK6 1076 aa3.47□□□□□ -1.85
BRCA1-229ENST00000621897 GLTPD2A6NH11 291 aa3.47□□□□□ -1.85
BRCA1-229ENST00000621897 SHISA9B4DS77 424 aa3.47□□□□□ -1.85
BRCA1-229ENST00000621897 RIPK2O43353 540 aa3.47□□□□□ -1.85
BRCA1-229ENST00000621897 TLX2O43763 284 aaPredicted RBP3.47□□□□□ -1.85
BRCA1-229ENST00000621897 ECE2O60344 883 aa3.47□□□□□ -1.85
BRCA1-229ENST00000621897 SMPD2O60906 423 aa3.47□□□□□ -1.85
BRCA1-229ENST00000621897 RTN2O75298 545 aa3.47□□□□□ -1.85
BRCA1-229ENST00000621897 TADA2AO75478 443 aa3.47□□□□□ -1.85
BRCA1-229ENST00000621897 POP4O95707 220 aaKnown RBP3.47□□□□□ -1.85
BRCA1-229ENST00000621897 DNAH10OSP0CZ25 163 aa3.47□□□□□ -1.85
BRCA1-229ENST00000621897 NEFHP12036 1026 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms