RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 A0A0G2JN53 185 aa20.47■□□□□ 0.87
SPAST-204ENST00000621856 EVPLLA8MZ36 301 aa20.47■□□□□ 0.87
SPAST-204ENST00000621856 C2orf74A8MZ97 194 aa20.47■□□□□ 0.87
SPAST-204ENST00000621856 GMNNO75496 209 aa20.47■□□□□ 0.87
SPAST-204ENST00000621856 EPN2O95208 641 aa20.47■□□□□ 0.87
SPAST-204ENST00000621856 SLC7A1P30825 629 aa20.47■□□□□ 0.87
SPAST-204ENST00000621856 SSR2P43308 183 aa20.47■□□□□ 0.87
SPAST-204ENST00000621856 RPS15AP62244 130 aaKnown RBP20.47■□□□□ 0.87
SPAST-204ENST00000621856 LRRC74AQ0VAA2 488 aa20.47■□□□□ 0.87
SPAST-204ENST00000621856 TMEM26Q6ZUK4 368 aa20.47■□□□□ 0.87
SPAST-204ENST00000621856 ZNF761Q86XN6 746 aaPredicted RBP20.47■□□□□ 0.87
SPAST-204ENST00000621856 RBM12BQ8IXT5 1001 aaKnown RBP20.47■□□□□ 0.87
SPAST-204ENST00000621856 DUS3LQ96G46 650 aaKnown RBP20.47■□□□□ 0.87
SPAST-204ENST00000621856 MACROD1Q9BQ69 325 aa20.47■□□□□ 0.87
SPAST-204ENST00000621856 C17orf62Q9BQA9 187 aa20.47■□□□□ 0.87
SPAST-204ENST00000621856 TBCDQ9BTW9 1192 aa20.47■□□□□ 0.87
SPAST-204ENST00000621856 EFHD1Q9BUP0 239 aa20.47■□□□□ 0.87
SPAST-204ENST00000621856 TWSG1Q9GZX9 223 aa20.47■□□□□ 0.87
SPAST-204ENST00000621856 LHX9Q9NQ69 397 aa20.47■□□□□ 0.87
SPAST-204ENST00000621856 WBP11Q9Y2W2 641 aaKnown RBP20.47■□□□□ 0.87
SPAST-204ENST00000621856 MDC1Q14676 2089 aaKnown RBP20.46■□□□□ 0.87
SPAST-204ENST00000621856 RNASET2O00584 256 aaKnown RBP20.46■□□□□ 0.87
SPAST-204ENST00000621856 MAGP20916 626 aa20.46■□□□□ 0.87
SPAST-204ENST00000621856 NXPH1P58417 271 aa20.46■□□□□ 0.87
SPAST-204ENST00000621856 ZXDAP98168 799 aa20.46■□□□□ 0.87
SPAST-204ENST00000621856 KLC1Q07866 573 aa20.46■□□□□ 0.87
SPAST-204ENST00000621856 TRIP10Q15642 601 aa20.46■□□□□ 0.87
SPAST-204ENST00000621856 GLYATQ6IB77 296 aa20.46■□□□□ 0.87
SPAST-204ENST00000621856 OR4A15Q8NGL6 344 aa20.46■□□□□ 0.87
SPAST-204ENST00000621856 KLHL31Q9H511 634 aa20.46■□□□□ 0.87
SPAST-204ENST00000621856 KAT8Q9H7Z6 458 aaKnown RBP20.46■□□□□ 0.87
SPAST-204ENST00000621856 HRASLS2Q9NWW9 162 aa20.46■□□□□ 0.87
SPAST-204ENST00000621856 DHRS12A0PJE2 317 aa20.45■□□□□ 0.86
SPAST-204ENST00000621856 C21orf59P57076 290 aa20.45■□□□□ 0.86
SPAST-204ENST00000621856 FXNQ16595 210 aa20.45■□□□□ 0.86
SPAST-204ENST00000621856 WDR45BQ5MNZ6 344 aa20.45■□□□□ 0.86
SPAST-204ENST00000621856 FIGLAQ6QHK4 219 aa20.45■□□□□ 0.86
SPAST-204ENST00000621856 TICAM1Q8IUC6 712 aa20.45■□□□□ 0.86
SPAST-204ENST00000621856 MMP21Q8N119 569 aa20.45■□□□□ 0.86
SPAST-204ENST00000621856 GOLM1Q8NBJ4 401 aa20.45■□□□□ 0.86
SPAST-204ENST00000621856 C1orf216Q8TAB5 229 aa20.45■□□□□ 0.86
SPAST-204ENST00000621856 TM4SF18Q96CE8 201 aa20.45■□□□□ 0.86
SPAST-204ENST00000621856 NSMCE2Q96MF7 247 aa20.45■□□□□ 0.86
SPAST-204ENST00000621856 AICDAQ9GZX7 198 aa20.45■□□□□ 0.86
SPAST-204ENST00000621856 VCX3BQ9H321 246 aa20.45■□□□□ 0.86
SPAST-204ENST00000621856 DDX31Q9H8H2 851 aaKnown RBP20.45■□□□□ 0.86
SPAST-204ENST00000621856 VPS4AQ9UN37 437 aa20.45■□□□□ 0.86
SPAST-204ENST00000621856 PCDHGB4Q9UN71 923 aa20.45■□□□□ 0.86
SPAST-204ENST00000621856 ELOVL7A1L3X0 281 aa20.44■□□□□ 0.86
SPAST-204ENST00000621856 OR2A25A4D2G3 310 aa20.44■□□□□ 0.86
SPAST-204ENST00000621856 FAM220BPB1ANY3 271 aa20.44■□□□□ 0.86
SPAST-204ENST00000621856 CLIC1O00299 241 aa20.44■□□□□ 0.86
SPAST-204ENST00000621856 ERI3O43414 337 aaKnown RBP20.44■□□□□ 0.86
SPAST-204ENST00000621856 TMPRSS11DO60235 418 aa20.44■□□□□ 0.86
SPAST-204ENST00000621856 ENGP17813 658 aa20.44■□□□□ 0.86
SPAST-204ENST00000621856 GGT1P19440 569 aa20.44■□□□□ 0.86
SPAST-204ENST00000621856 PSMA4P25789 261 aaKnown RBP20.44■□□□□ 0.86
SPAST-204ENST00000621856 GSTM5P46439 218 aa20.44■□□□□ 0.86
SPAST-204ENST00000621856 ALDH9A1P49189 494 aa20.44■□□□□ 0.86
SPAST-204ENST00000621856 CSNK1EP49674 416 aaKnown RBP20.44■□□□□ 0.86
SPAST-204ENST00000621856 MAZP56270 477 aaKnown RBP20.44■□□□□ 0.86
SPAST-204ENST00000621856 HYAL2Q12891 473 aa20.44■□□□□ 0.86
SPAST-204ENST00000621856 MAP7Q14244 749 aa20.44■□□□□ 0.86
SPAST-204ENST00000621856 LPCAT4Q643R3 524 aa20.44■□□□□ 0.86
SPAST-204ENST00000621856 ARMC6Q6NXE6 501 aa20.44■□□□□ 0.86
SPAST-204ENST00000621856 TSSK4Q6SA08 328 aa20.44■□□□□ 0.86
SPAST-204ENST00000621856 SPESP1Q6UW49 350 aa20.44■□□□□ 0.86
SPAST-204ENST00000621856 OOSP2Q86WS3 158 aa20.44■□□□□ 0.86
SPAST-204ENST00000621856 DTWD1Q8N5C7 304 aa20.44■□□□□ 0.86
SPAST-204ENST00000621856 ZNF548Q8NEK5 533 aaPredicted RBP20.44■□□□□ 0.86
SPAST-204ENST00000621856 CANT1Q8WVQ1 401 aa20.44■□□□□ 0.86
SPAST-204ENST00000621856 DNASE2BQ8WZ79 361 aa20.44■□□□□ 0.86
SPAST-204ENST00000621856 CIDECQ96AQ7 238 aaPredicted RBP20.44■□□□□ 0.86
SPAST-204ENST00000621856 SLCO4A1Q96BD0 722 aa20.44■□□□□ 0.86
SPAST-204ENST00000621856 MS4A6EQ96DS6 147 aa20.44■□□□□ 0.86
SPAST-204ENST00000621856 TEFMQ96QE5 360 aaKnown RBP20.44■□□□□ 0.86
SPAST-204ENST00000621856 PKP2Q99959 881 aa20.44■□□□□ 0.86
SPAST-204ENST00000621856 DUSP15Q9H1R2 295 aaPredicted RBP20.44■□□□□ 0.86
SPAST-204ENST00000621856 CD320Q9NPF0 282 aa20.44■□□□□ 0.86
SPAST-204ENST00000621856 ANKMY1Q9P2S6 941 aa20.44■□□□□ 0.86
SPAST-204ENST00000621856 AURKCQ9UQB9 309 aa20.44■□□□□ 0.86
SPAST-204ENST00000621856 PPM1DO15297 605 aa20.44■□□□□ 0.86
SPAST-204ENST00000621856 TNFSF14O43557 240 aa20.44■□□□□ 0.86
SPAST-204ENST00000621856 ABCB1P08183 1280 aaPredicted RBP20.44■□□□□ 0.86
SPAST-204ENST00000621856 DDX5P17844 614 aaKnown RBP20.44■□□□□ 0.86
SPAST-204ENST00000621856 DDCP20711 480 aa20.44■□□□□ 0.86
SPAST-204ENST00000621856 STXBP1P61764 594 aaKnown RBP20.44■□□□□ 0.86
SPAST-204ENST00000621856 HNRNPKP61978 463 aaKnown RBP eCLIP20.44■□□□□ 0.86
SPAST-204ENST00000621856 HEPACAMQ14CZ8 416 aa20.44■□□□□ 0.86
SPAST-204ENST00000621856 CYP51A1Q16850 503 aa20.44■□□□□ 0.86
SPAST-204ENST00000621856 SLC5A12Q1EHB4 618 aa20.44■□□□□ 0.86
SPAST-204ENST00000621856 LRRC36Q1X8D7 754 aa20.44■□□□□ 0.86
SPAST-204ENST00000621856 ADPRMQ3LIE5 342 aa20.44■□□□□ 0.86
SPAST-204ENST00000621856 CWF19L1Q69YN2 538 aaKnown RBP20.44■□□□□ 0.86
SPAST-204ENST00000621856 TRIM40Q6P9F5 258 aa20.44■□□□□ 0.86
SPAST-204ENST00000621856 ASPGQ86U10 573 aa20.44■□□□□ 0.86
SPAST-204ENST00000621856 MICU2Q8IYU8 434 aa20.44■□□□□ 0.86
SPAST-204ENST00000621856 OR2L5Q8NG80 312 aa20.44■□□□□ 0.86
SPAST-204ENST00000621856 FIG4Q92562 907 aa20.44■□□□□ 0.86
SPAST-204ENST00000621856 KLHL25Q9H0H3 589 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms