RNA–Protein interactions for RNA: ENST00000621474.4

CBWD3-217, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-217ENST00000621474 UBE3DQ7Z6J8 389 aa13.56□□□□□ -0.24
CBWD3-217ENST00000621474 MILR1Q7Z6M3 343 aa13.56□□□□□ -0.24
CBWD3-217ENST00000621474 AGAP11Q8TF27 550 aa13.56□□□□□ -0.24
CBWD3-217ENST00000621474 CCT6BQ92526 530 aa13.56□□□□□ -0.24
CBWD3-217ENST00000621474 UBE2E3Q969T4 207 aa13.56□□□□□ -0.24
CBWD3-217ENST00000621474 ATP6V1E2Q96A05 226 aa13.56□□□□□ -0.24
CBWD3-217ENST00000621474 COL26A1Q96A83 441 aa13.56□□□□□ -0.24
CBWD3-217ENST00000621474 F2RL3Q96RI0 385 aa13.56□□□□□ -0.24
CBWD3-217ENST00000621474 C17orf62Q9BQA9 187 aa13.56□□□□□ -0.24
CBWD3-217ENST00000621474 REXO4Q9GZR2 422 aaKnown RBP13.56□□□□□ -0.24
CBWD3-217ENST00000621474 WDR54Q9H977 334 aa13.56□□□□□ -0.24
CBWD3-217ENST00000621474 ANKHQ9HCJ1 492 aa13.56□□□□□ -0.24
CBWD3-217ENST00000621474 TNFRSF12AQ9NP84 129 aa13.56□□□□□ -0.24
CBWD3-217ENST00000621474 DMRT3Q9NQL9 472 aa13.56□□□□□ -0.24
CBWD3-217ENST00000621474 ARGLU1Q9NWB6 273 aaPredicted RBP13.56□□□□□ -0.24
CBWD3-217ENST00000621474 A0A0G2JN53 185 aa13.55□□□□□ -0.24
CBWD3-217ENST00000621474 PRPF4O43172 522 aaKnown RBP eCLIP13.55□□□□□ -0.24
CBWD3-217ENST00000621474 ERI3O43414 337 aaKnown RBP13.55□□□□□ -0.24
CBWD3-217ENST00000621474 RDH16O75452 317 aa13.55□□□□□ -0.24
CBWD3-217ENST00000621474 SASH3O75995 380 aa13.55□□□□□ -0.24
CBWD3-217ENST00000621474 TGFB1P01137 390 aa13.55□□□□□ -0.24
CBWD3-217ENST00000621474 DHRS4L1P0CG22 281 aa13.55□□□□□ -0.24
CBWD3-217ENST00000621474 ARRB2P32121 409 aa13.55□□□□□ -0.24
CBWD3-217ENST00000621474 PIK3CBP42338 1070 aa13.55□□□□□ -0.24
CBWD3-217ENST00000621474 AVPR1BP47901 424 aa13.55□□□□□ -0.24
CBWD3-217ENST00000621474 LCP2Q13094 533 aa13.55□□□□□ -0.24
CBWD3-217ENST00000621474 DDX39BQ13838 428 aaKnown RBP13.55□□□□□ -0.24
CBWD3-217ENST00000621474 ERV3-1Q14264 604 aa13.55□□□□□ -0.24
CBWD3-217ENST00000621474 TCHHL1Q5QJ38 904 aaPredicted RBP13.55□□□□□ -0.24
CBWD3-217ENST00000621474 CES4AQ5XG92 561 aa13.55□□□□□ -0.24
CBWD3-217ENST00000621474 SHISA6Q6ZSJ9 500 aa13.55□□□□□ -0.24
CBWD3-217ENST00000621474 ABHD13Q7L211 337 aa13.55□□□□□ -0.24
CBWD3-217ENST00000621474 LAPTM4BQ86VI4 370 aa13.55□□□□□ -0.24
CBWD3-217ENST00000621474 CCNYL1Q8N7R7 359 aa13.55□□□□□ -0.24
CBWD3-217ENST00000621474 OR2L5Q8NG80 312 aa13.55□□□□□ -0.24
CBWD3-217ENST00000621474 OR2Y1Q8NGV0 311 aa13.55□□□□□ -0.24
CBWD3-217ENST00000621474 OR6Y1Q8NGX8 325 aa13.55□□□□□ -0.24
CBWD3-217ENST00000621474 STT3BQ8TCJ2 826 aa13.55□□□□□ -0.24
CBWD3-217ENST00000621474 PPP4R1Q8TF05 950 aa13.55□□□□□ -0.24
CBWD3-217ENST00000621474 GAL3ST3Q96A11 431 aa13.55□□□□□ -0.24
CBWD3-217ENST00000621474 ARL8AQ96BM9 186 aa13.55□□□□□ -0.24
CBWD3-217ENST00000621474 QRFPRQ96P65 431 aa13.55□□□□□ -0.24
CBWD3-217ENST00000621474 MESP1Q9BRJ9 268 aa13.55□□□□□ -0.24
CBWD3-217ENST00000621474 GATA5Q9BWX5 397 aaPredicted RBP13.55□□□□□ -0.24
CBWD3-217ENST00000621474 FARSBQ9NSD9 589 aaKnown RBP13.55□□□□□ -0.24
CBWD3-217ENST00000621474 ZNF282Q9UDV7 671 aaPredicted RBP13.55□□□□□ -0.24
CBWD3-217ENST00000621474 TRPS1Q9UHF7 1281 aa13.55□□□□□ -0.24
CBWD3-217ENST00000621474 MID2Q9UJV3 735 aa13.55□□□□□ -0.24
CBWD3-217ENST00000621474 CDC14AQ9UNH5 594 aa13.55□□□□□ -0.24
CBWD3-217ENST00000621474 ZNF891A8MT65 544 aaPredicted RBP13.54□□□□□ -0.24
CBWD3-217ENST00000621474 TRIM13O60858 407 aa13.54□□□□□ -0.24
CBWD3-217ENST00000621474 SH3BGRLO75368 114 aa13.54□□□□□ -0.24
CBWD3-217ENST00000621474 JRKO75564 520 aa13.54□□□□□ -0.24
CBWD3-217ENST00000621474 RECKO95980 971 aa13.54□□□□□ -0.24
CBWD3-217ENST00000621474 ZGLP1P0C6A0 271 aa13.54□□□□□ -0.24
CBWD3-217ENST00000621474 PIM1P11309 404 aaPredicted RBP13.54□□□□□ -0.24
CBWD3-217ENST00000621474 ARL1P40616 181 aaPredicted RBP13.54□□□□□ -0.24
CBWD3-217ENST00000621474 FOXA1P55317 472 aa13.54□□□□□ -0.24
CBWD3-217ENST00000621474 STXBP1P61764 594 aaKnown RBP13.54□□□□□ -0.24
CBWD3-217ENST00000621474 RPS13P62277 151 aaKnown RBP13.54□□□□□ -0.24
CBWD3-217ENST00000621474 OLR1P78380 273 aa13.54□□□□□ -0.24
CBWD3-217ENST00000621474 CDC20Q12834 499 aa13.54□□□□□ -0.24
CBWD3-217ENST00000621474 FRG2Q64ET8 278 aa13.54□□□□□ -0.24
CBWD3-217ENST00000621474 ABHD17CQ6PCB6 329 aa13.54□□□□□ -0.24
CBWD3-217ENST00000621474 ZNF793Q6ZN11 406 aa13.54□□□□□ -0.24
CBWD3-217ENST00000621474 ZC3H7AQ8IWR0 971 aaKnown RBP13.54□□□□□ -0.24
CBWD3-217ENST00000621474 FRG2BQ96QU4 278 aa13.54□□□□□ -0.24
CBWD3-217ENST00000621474 KCNA7Q96RP8 456 aa13.54□□□□□ -0.24
CBWD3-217ENST00000621474 ZNF717Q9BY31 904 aaPredicted RBP13.54□□□□□ -0.24
CBWD3-217ENST00000621474 TGIF2Q9GZN2 237 aa13.54□□□□□ -0.24
CBWD3-217ENST00000621474 OR51B5Q9H339 312 aa13.54□□□□□ -0.24
CBWD3-217ENST00000621474 SOX17Q9H6I2 414 aaPredicted RBP13.54□□□□□ -0.24
CBWD3-217ENST00000621474 PRDM7Q9NQW5 492 aa13.54□□□□□ -0.24
CBWD3-217ENST00000621474 HCN3Q9P1Z3 774 aa13.54□□□□□ -0.24
CBWD3-217ENST00000621474 TRPC4Q9UBN4 977 aa13.54□□□□□ -0.24
CBWD3-217ENST00000621474 GPN3Q9UHW5 284 aaPredicted RBP13.54□□□□□ -0.24
CBWD3-217ENST00000621474 PTRH2Q9Y3E5 179 aaKnown RBP13.54□□□□□ -0.24
CBWD3-217ENST00000621474 URADA6NGE7 173 aa13.53□□□□□ -0.24
CBWD3-217ENST00000621474 FOXE1O00358 373 aaPredicted RBP13.53□□□□□ -0.24
CBWD3-217ENST00000621474 BMP10O95393 424 aa13.53□□□□□ -0.24
CBWD3-217ENST00000621474 ESRRBO95718 433 aa13.53□□□□□ -0.24
CBWD3-217ENST00000621474 MLYCDO95822 493 aa13.53□□□□□ -0.24
CBWD3-217ENST00000621474 BPGMP07738 259 aa13.53□□□□□ -0.24
CBWD3-217ENST00000621474 PRKAR1AP10644 381 aa13.53□□□□□ -0.24
CBWD3-217ENST00000621474 SERPINB1P30740 379 aa13.53□□□□□ -0.24
CBWD3-217ENST00000621474 PLA2G16P53816 162 aa13.53□□□□□ -0.24
CBWD3-217ENST00000621474 MAGOHP61326 146 aaKnown RBP13.53□□□□□ -0.24
CBWD3-217ENST00000621474 KLC1Q07866 573 aa13.53□□□□□ -0.24
CBWD3-217ENST00000621474 UGT8Q16880 541 aa13.53□□□□□ -0.24
CBWD3-217ENST00000621474 KHDRBS2Q5VWX1 349 aaKnown RBP13.53□□□□□ -0.24
CBWD3-217ENST00000621474 ZCCHC23Q6ZST2 131 aa13.53□□□□□ -0.24
CBWD3-217ENST00000621474 GPRIN3Q6ZVF9 776 aa13.53□□□□□ -0.24
CBWD3-217ENST00000621474 HDXQ7Z353 690 aa13.53□□□□□ -0.24
CBWD3-217ENST00000621474 CDYL2Q8N8U2 506 aa13.53□□□□□ -0.24
CBWD3-217ENST00000621474 OR51Q1Q8NH59 317 aa13.53□□□□□ -0.24
CBWD3-217ENST00000621474 MTFMTQ96DP5 389 aaKnown RBP13.53□□□□□ -0.24
CBWD3-217ENST00000621474 CMTM7Q96FZ5 175 aa13.53□□□□□ -0.24
CBWD3-217ENST00000621474 PKNOX2Q96KN3 472 aa13.53□□□□□ -0.24
CBWD3-217ENST00000621474 SH3GL2Q99962 352 aa13.53□□□□□ -0.24
CBWD3-217ENST00000621474 VIPAS39Q9H9C1 493 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms