RNA–Protein interactions for RNA: ENST00000620676.4

VPS13D-214, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13D, Length 16,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-214ENST00000620676 CTU2Q2VPK5 515 aaKnown RBP4.87□□□□□ -1.63
VPS13D-214ENST00000620676 AKR1C8PQ5T2L2 129 aa4.87□□□□□ -1.63
VPS13D-214ENST00000620676 SYPL2Q5VXT5 272 aa4.87□□□□□ -1.63
VPS13D-214ENST00000620676 DNAAF1Q8NEP3 725 aa4.87□□□□□ -1.63
VPS13D-214ENST00000620676 FAM167AQ96KS9 214 aa4.87□□□□□ -1.63
VPS13D-214ENST00000620676 PCDHB5Q9Y5E4 795 aa4.87□□□□□ -1.63
VPS13D-214ENST00000620676 MADDQ8WXG6 1647 aa4.87□□□□□ -1.63
VPS13D-214ENST00000620676 A0A0A6YYH2 397 aa4.87□□□□□ -1.63
VPS13D-214ENST00000620676 A6NJ64 397 aa4.87□□□□□ -1.63
VPS13D-214ENST00000620676 LEUTXA8MZ59 168 aa4.87□□□□□ -1.63
VPS13D-214ENST00000620676 AHSGP02765 367 aa4.87□□□□□ -1.63
VPS13D-214ENST00000620676 ICAM1P05362 532 aa4.87□□□□□ -1.63
VPS13D-214ENST00000620676 UNGP13051 313 aaPredicted RBP4.87□□□□□ -1.63
VPS13D-214ENST00000620676 PIGAP37287 484 aa4.87□□□□□ -1.63
VPS13D-214ENST00000620676 MBOAT1Q6ZNC8 495 aa4.87□□□□□ -1.63
VPS13D-214ENST00000620676 ACOT11Q8WXI4 607 aaPredicted RBP4.87□□□□□ -1.63
VPS13D-214ENST00000620676 CLP1Q92989 425 aaKnown RBP4.87□□□□□ -1.63
VPS13D-214ENST00000620676 COL3A1P02461 1466 aaPredicted RBP4.87□□□□□ -1.63
VPS13D-214ENST00000620676 PRRC2BQ5JSZ5 2229 aaKnown RBP4.87□□□□□ -1.63
VPS13D-214ENST00000620676 DDNO94850 711 aaPredicted RBP4.87□□□□□ -1.63
VPS13D-214ENST00000620676 CBX7O95931 251 aa4.87□□□□□ -1.63
VPS13D-214ENST00000620676 IFNA17P01571 189 aa4.87□□□□□ -1.63
VPS13D-214ENST00000620676 LUMP51884 338 aaPredicted RBP4.87□□□□□ -1.63
VPS13D-214ENST00000620676 C4orf17Q53FE4 359 aa4.87□□□□□ -1.63
VPS13D-214ENST00000620676 NAA40Q86UY6 237 aa4.87□□□□□ -1.63
VPS13D-214ENST00000620676 TMEM126BQ8IUX1 230 aa4.87□□□□□ -1.63
VPS13D-214ENST00000620676 GTPBP8Q8N3Z3 284 aaPredicted RBP4.87□□□□□ -1.63
VPS13D-214ENST00000620676 KLHL36Q8N4N3 616 aa4.87□□□□□ -1.63
VPS13D-214ENST00000620676 ZNF565Q8N9K5 539 aa4.87□□□□□ -1.63
VPS13D-214ENST00000620676 TMEM102Q8N9M5 508 aaPredicted RBP4.87□□□□□ -1.63
VPS13D-214ENST00000620676 GMCL1P1Q8NEA9 526 aa4.87□□□□□ -1.63
VPS13D-214ENST00000620676 OR7G2Q8NG99 324 aa4.87□□□□□ -1.63
VPS13D-214ENST00000620676 SLC22A17Q8WUG5 538 aa4.87□□□□□ -1.63
VPS13D-214ENST00000620676 ZNF670Q9BS34 389 aa4.87□□□□□ -1.63
VPS13D-214ENST00000620676 CCM2Q9BSQ5 444 aa4.87□□□□□ -1.63
VPS13D-214ENST00000620676 FZD4Q9ULV1 537 aa4.87□□□□□ -1.63
VPS13D-214ENST00000620676 TBX22Q9Y458 520 aa4.87□□□□□ -1.63
VPS13D-214ENST00000620676 FOXA1P55317 472 aa4.87□□□□□ -1.63
VPS13D-214ENST00000620676 CBFBQ13951 182 aa4.87□□□□□ -1.63
VPS13D-214ENST00000620676 PPCDCQ96CD2 204 aa4.87□□□□□ -1.63
VPS13D-214ENST00000620676 CCDC32Q9BV29 185 aa4.87□□□□□ -1.63
VPS13D-214ENST00000620676 ENTPD4Q9Y227 616 aa4.87□□□□□ -1.63
VPS13D-214ENST00000620676 SLC27A6Q9Y2P4 619 aa4.87□□□□□ -1.63
VPS13D-214ENST00000620676 WDR45Q9Y484 360 aa4.87□□□□□ -1.63
VPS13D-214ENST00000620676 TRBC2A0A5B9 178 aa4.87□□□□□ -1.63
VPS13D-214ENST00000620676 SLC22A2O15244 555 aa4.87□□□□□ -1.63
VPS13D-214ENST00000620676 PAGE1O75459 146 aa4.87□□□□□ -1.63
VPS13D-214ENST00000620676 F9P00740 461 aa4.87□□□□□ -1.63
VPS13D-214ENST00000620676 ZBTB48P10074 688 aaPredicted RBP4.87□□□□□ -1.63
VPS13D-214ENST00000620676 PRKAR1BP31321 381 aa4.87□□□□□ -1.63
VPS13D-214ENST00000620676 COL28A1Q2UY09 1125 aa4.87□□□□□ -1.63
VPS13D-214ENST00000620676 HSDL1Q3SXM5 330 aa4.87□□□□□ -1.63
VPS13D-214ENST00000620676 AVPI1Q5T686 147 aa4.87□□□□□ -1.63
VPS13D-214ENST00000620676 VGLL2Q8N8G2 317 aa4.87□□□□□ -1.63
VPS13D-214ENST00000620676 OR2L3Q8NG85 312 aa4.87□□□□□ -1.63
VPS13D-214ENST00000620676 SLC13A3Q8WWT9 602 aa4.87□□□□□ -1.63
VPS13D-214ENST00000620676 ZUFSPQ96AP4 578 aa4.87□□□□□ -1.63
VPS13D-214ENST00000620676 EPYCQ99645 322 aa4.87□□□□□ -1.63
VPS13D-214ENST00000620676 TMEM45AQ9NWC5 275 aa4.87□□□□□ -1.63
VPS13D-214ENST00000620676 TNFRSF10DQ9UBN6 386 aa4.87□□□□□ -1.63
VPS13D-214ENST00000620676 PRMT3O60678 531 aa4.87□□□□□ -1.63
VPS13D-214ENST00000620676 RGS9O75916 674 aaPredicted RBP4.87□□□□□ -1.63
VPS13D-214ENST00000620676 MLLT6P55198 1093 aaPredicted RBP4.87□□□□□ -1.63
VPS13D-214ENST00000620676 HES5Q5TA89 166 aa4.87□□□□□ -1.63
VPS13D-214ENST00000620676 FIGNL1Q6PIW4 674 aa4.87□□□□□ -1.63
VPS13D-214ENST00000620676 LIPIQ6XZB0 460 aa4.87□□□□□ -1.63
VPS13D-214ENST00000620676 SAMD14Q8IZD0 417 aaPredicted RBP4.87□□□□□ -1.63
VPS13D-214ENST00000620676 ADGRG5Q8IZF4 528 aa4.87□□□□□ -1.63
VPS13D-214ENST00000620676 GRHL3Q8TE85 626 aa4.87□□□□□ -1.63
VPS13D-214ENST00000620676 SAP130Q9H0E3 1048 aa4.87□□□□□ -1.63
VPS13D-214ENST00000620676 AP1M2Q9Y6Q5 423 aa4.87□□□□□ -1.63
VPS13D-214ENST00000620676 H7C1Q1 480 aa4.87□□□□□ -1.63
VPS13D-214ENST00000620676 SP140Q13342 867 aa4.87□□□□□ -1.63
VPS13D-214ENST00000620676 TECPR1Q7Z6L1 1165 aa4.87□□□□□ -1.63
VPS13D-214ENST00000620676 OAFQ86UD1 273 aa4.87□□□□□ -1.63
VPS13D-214ENST00000620676 ZNF548Q8NEK5 533 aaPredicted RBP4.87□□□□□ -1.63
VPS13D-214ENST00000620676 FAM83CQ9BQN1 747 aa4.87□□□□□ -1.63
VPS13D-214ENST00000620676 LANCL2Q9NS86 450 aa4.87□□□□□ -1.63
VPS13D-214ENST00000620676 DZANK1Q9NVP4 752 aa4.87□□□□□ -1.63
VPS13D-214ENST00000620676 MYH8P13535 1937 aa4.87□□□□□ -1.63
VPS13D-214ENST00000620676 PXDNLA1KZ92 1463 aa4.87□□□□□ -1.63
VPS13D-214ENST00000620676 A0A0G2JN53 185 aa4.87□□□□□ -1.63
VPS13D-214ENST00000620676 SLC25A14O95258 325 aaPredicted RBP4.87□□□□□ -1.63
VPS13D-214ENST00000620676 CDK1P06493 297 aa4.87□□□□□ -1.63
VPS13D-214ENST00000620676 PER3P56645 1201 aa4.87□□□□□ -1.63
VPS13D-214ENST00000620676 SLC35G1Q2M3R5 365 aa4.87□□□□□ -1.63
VPS13D-214ENST00000620676 PM20D2Q8IYS1 436 aa4.87□□□□□ -1.63
VPS13D-214ENST00000620676 OR52L1Q8NGH7 329 aa4.87□□□□□ -1.63
VPS13D-214ENST00000620676 SLCO2A1Q92959 643 aa4.87□□□□□ -1.63
VPS13D-214ENST00000620676 FBXO32Q969P5 355 aa4.87□□□□□ -1.63
VPS13D-214ENST00000620676 MGLLQ99685 303 aa4.87□□□□□ -1.63
VPS13D-214ENST00000620676 GON7Q9BXV9 100 aa4.87□□□□□ -1.63
VPS13D-214ENST00000620676 CST11Q9H112 138 aa4.87□□□□□ -1.63
VPS13D-214ENST00000620676 POLLQ9UGP5 575 aa4.87□□□□□ -1.63
VPS13D-214ENST00000620676 PCDHGB1Q9Y5G3 927 aa4.87□□□□□ -1.63
VPS13D-214ENST00000620676 A0A0U1RQS6 177 aa4.87□□□□□ -1.63
VPS13D-214ENST00000620676 OR7A17O14581 309 aa4.87□□□□□ -1.63
VPS13D-214ENST00000620676 TUSC3Q13454 348 aa4.87□□□□□ -1.63
VPS13D-214ENST00000620676 ZDHHC17Q8IUH5 632 aa4.87□□□□□ -1.63
VPS13D-214ENST00000620676 ACVR1CQ8NER5 493 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms