RNA–Protein interactions for RNA: ENST00000620219.4

CPSF1-213, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF1, Length 4,462 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-213ENST00000620219 MAZP56270 477 aaKnown RBP15.05■□□□□ 0
CPSF1-213ENST00000620219 SLAMF1Q13291 335 aa15.05■□□□□ 0
CPSF1-213ENST00000620219 LAPTM4AQ15012 233 aa15.05■□□□□ 0
CPSF1-213ENST00000620219 FGD3Q5JSP0 725 aa15.05■□□□□ 0
CPSF1-213ENST00000620219 ATG9BQ674R7 924 aa15.05■□□□□ 0
CPSF1-213ENST00000620219 TRIM46Q7Z4K8 759 aa15.05■□□□□ 0
CPSF1-213ENST00000620219 KLHDC8AQ8IYD2 350 aa15.05■□□□□ 0
CPSF1-213ENST00000620219 OFCC1Q8IZS5 231 aa15.05■□□□□ 0
CPSF1-213ENST00000620219 TRPV3Q8NET8 790 aa15.05■□□□□ 0
CPSF1-213ENST00000620219 OR52J3Q8NH60 311 aa15.05■□□□□ 0
CPSF1-213ENST00000620219 C16orf78Q8WTQ4 265 aa15.05■□□□□ 0
CPSF1-213ENST00000620219 MAL2Q969L2 176 aa15.05■□□□□ 0
CPSF1-213ENST00000620219 GTPBP2Q9BX10 602 aaKnown RBP15.05■□□□□ 0
CPSF1-213ENST00000620219 CXorf56Q9H5V9 222 aa15.05■□□□□ 0
CPSF1-213ENST00000620219 ACTR3BQ9P1U1 418 aa15.05■□□□□ 0
CPSF1-213ENST00000620219 GABRR3A8MPY1 467 aa15.05■□□□□ -0
CPSF1-213ENST00000620219 BUD31P41223 144 aaPredicted RBP15.05■□□□□ -0
CPSF1-213ENST00000620219 ELOCQ15369 112 aa15.05■□□□□ -0
CPSF1-213ENST00000620219 PDSS2Q86YH6 399 aa15.05■□□□□ -0
CPSF1-213ENST00000620219 EID3Q8N140 333 aa15.05■□□□□ -0
CPSF1-213ENST00000620219 ZNF555Q8NEP9 628 aa15.05■□□□□ -0
CPSF1-213ENST00000620219 ZFP28Q8NHY6 868 aa15.05■□□□□ -0
CPSF1-213ENST00000620219 VANGL1Q8TAA9 524 aaPredicted RBP15.05■□□□□ -0
CPSF1-213ENST00000620219 TGM7Q96PF1 710 aa15.05■□□□□ -0
CPSF1-213ENST00000620219 NELL2Q99435 816 aa15.05■□□□□ -0
CPSF1-213ENST00000620219 SPATA7Q9P0W8 599 aa15.05■□□□□ -0
CPSF1-213ENST00000620219 TCF20Q9UGU0 1960 aaKnown RBP15.05■□□□□ -0
CPSF1-213ENST00000620219 GPR89AB7ZAQ6 455 aa15.05■□□□□ -0
CPSF1-213ENST00000620219 GPR89BP0CG08 455 aa15.05■□□□□ -0
CPSF1-213ENST00000620219 SLC19A1P41440 591 aa15.05■□□□□ -0
CPSF1-213ENST00000620219 ALG11Q2TAA5 492 aa15.05■□□□□ -0
CPSF1-213ENST00000620219 C11orf65Q8NCR3 313 aa15.05■□□□□ -0
CPSF1-213ENST00000620219 TTLQ8NG68 377 aa15.05■□□□□ -0
CPSF1-213ENST00000620219 TSPEARQ8WU66 669 aa15.05■□□□□ -0
CPSF1-213ENST00000620219 USP7Q93009 1102 aa15.05■□□□□ -0
CPSF1-213ENST00000620219 BATF3Q9NR55 127 aa15.05■□□□□ -0
CPSF1-213ENST00000620219 DOCK8Q8NF50 2099 aa15.04■□□□□ -0
CPSF1-213ENST00000620219 SUV39H1O43463 412 aa15.04■□□□□ -0
CPSF1-213ENST00000620219 NT5EP21589 574 aa15.04■□□□□ -0
CPSF1-213ENST00000620219 IFNA8P32881 189 aa15.04■□□□□ -0
CPSF1-213ENST00000620219 GPR18Q14330 331 aa15.04■□□□□ -0
CPSF1-213ENST00000620219 MINDY4Q4G0A6 757 aa15.04■□□□□ -0
CPSF1-213ENST00000620219 TTC33Q6PID6 262 aaPredicted RBP15.04■□□□□ -0
CPSF1-213ENST00000620219 RNF130Q86XS8 419 aa15.04■□□□□ -0
CPSF1-213ENST00000620219 SMYD1Q8NB12 490 aa15.04■□□□□ -0
CPSF1-213ENST00000620219 C9orf16Q9BUW7 83 aa15.04■□□□□ -0
CPSF1-213ENST00000620219 CTPS2Q9NRF8 586 aa15.04■□□□□ -0
CPSF1-213ENST00000620219 UNC13CQ8NB66 2214 aa15.04■□□□□ -0
CPSF1-213ENST00000620219 GPR179Q6PRD1 2367 aa15.04■□□□□ -0
CPSF1-213ENST00000620219 CLOCKO15516 846 aa15.04■□□□□ -0
CPSF1-213ENST00000620219 HSD3B1P14060 373 aa15.04■□□□□ -0
CPSF1-213ENST00000620219 HSD3B2P26439 372 aa15.04■□□□□ -0
CPSF1-213ENST00000620219 BMP8BP34820 402 aa15.04■□□□□ -0
CPSF1-213ENST00000620219 IST1P53990 364 aa15.04■□□□□ -0
CPSF1-213ENST00000620219 TEAD4Q15561 434 aa15.04■□□□□ -0
CPSF1-213ENST00000620219 GTF2H4Q92759 462 aa15.04■□□□□ -0
CPSF1-213ENST00000620219 KCNH6Q9H252 994 aa15.04■□□□□ -0
CPSF1-213ENST00000620219 FAM120CQ9NX05 1096 aaKnown RBP15.04■□□□□ -0
CPSF1-213ENST00000620219 SCHIP1Q9P0W5 487 aaPredicted RBP15.04■□□□□ -0
CPSF1-213ENST00000620219 SPTBN2O15020 2390 aa15.04■□□□□ -0
CPSF1-213ENST00000620219 KLHL33A6NCF5 533 aa15.04■□□□□ -0
CPSF1-213ENST00000620219 H0YIV9 168 aa15.04■□□□□ -0
CPSF1-213ENST00000620219 EI24O14681 340 aa15.04■□□□□ -0
CPSF1-213ENST00000620219 PSMA3P25788 255 aa15.04■□□□□ -0
CPSF1-213ENST00000620219 DAB2P98082 770 aa15.04■□□□□ -0
CPSF1-213ENST00000620219 TRAP1Q12931 704 aaKnown RBP15.04■□□□□ -0
CPSF1-213ENST00000620219 ZXDCQ2QGD7 858 aaPredicted RBP15.04■□□□□ -0
CPSF1-213ENST00000620219 ATAD3BQ5T9A4 648 aa15.04■□□□□ -0
CPSF1-213ENST00000620219 DEPDC1Q5TB30 811 aa15.04■□□□□ -0
CPSF1-213ENST00000620219 FIGLAQ6QHK4 219 aa15.04■□□□□ -0
CPSF1-213ENST00000620219 NLRP8Q86W28 1048 aa15.04■□□□□ -0
CPSF1-213ENST00000620219 GKN2Q86XP6 184 aa15.04■□□□□ -0
CPSF1-213ENST00000620219 ADCY4Q8NFM4 1077 aa15.04■□□□□ -0
CPSF1-213ENST00000620219 ZBED6CLQ96FA7 236 aaPredicted RBP15.04■□□□□ -0
CPSF1-213ENST00000620219 RPF2Q9H7B2 306 aaKnown RBP15.04■□□□□ -0
CPSF1-213ENST00000620219 ADAP2Q9NPF8 381 aa15.04■□□□□ -0
CPSF1-213ENST00000620219 HYAL2Q12891 473 aa15.04■□□□□ -0
CPSF1-213ENST00000620219 GCNT6Q5T4J0 391 aa15.04■□□□□ -0
CPSF1-213ENST00000620219 DTWD1Q8N5C7 304 aa15.04■□□□□ -0
CPSF1-213ENST00000620219 VCX3AQ9NNX9 186 aa15.04■□□□□ -0
CPSF1-213ENST00000620219 SAMHD1Q9Y3Z3 626 aaKnown RBP15.04■□□□□ -0
CPSF1-213ENST00000620219 SCAMP2O15127 329 aaKnown RBP15.03■□□□□ -0
CPSF1-213ENST00000620219 PRAMEF4O60810 478 aa15.03■□□□□ -0
CPSF1-213ENST00000620219 GNSP15586 552 aa15.03■□□□□ -0
CPSF1-213ENST00000620219 GK3PQ14409 553 aa15.03■□□□□ -0
CPSF1-213ENST00000620219 PRAMEF9Q5VWM5 478 aa15.03■□□□□ -0
CPSF1-213ENST00000620219 TMEM26Q6ZUK4 368 aa15.03■□□□□ -0
CPSF1-213ENST00000620219 C16orf62Q7Z3J2 963 aa15.03■□□□□ -0
CPSF1-213ENST00000620219 BMFQ96LC9 184 aa15.03■□□□□ -0
CPSF1-213ENST00000620219 SLC29A1Q99808 456 aa15.03■□□□□ -0
CPSF1-213ENST00000620219 RIBC2Q9H4K1 309 aa15.03■□□□□ -0
CPSF1-213ENST00000620219 ZNF282Q9UDV7 671 aaPredicted RBP15.03■□□□□ -0
CPSF1-213ENST00000620219 EBF1Q9UH73 591 aa15.03■□□□□ -0
CPSF1-213ENST00000620219 XIRP2A4UGR9 3374 aa15.03■□□□□ -0
CPSF1-213ENST00000620219 NINQ8N4C6 2090 aa15.03■□□□□ -0
CPSF1-213ENST00000620219 ASPDHA6ND91 283 aa15.03■□□□□ -0
CPSF1-213ENST00000620219 C2orf74A8MZ97 194 aa15.03■□□□□ -0
CPSF1-213ENST00000620219 IFNA14P01570 189 aa15.03■□□□□ -0
CPSF1-213ENST00000620219 PIM1P11309 404 aaPredicted RBP15.03■□□□□ -0
CPSF1-213ENST00000620219 CYP4B1P13584 511 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms