RNA–Protein interactions for RNA: ENST00000620197.4

SKP2-209, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 2 BASIC

Gene SKP2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-209ENST00000620197 ASMTP46597 345 aa12.56□□□□□ -0.4
SKP2-209ENST00000620197 IL1RL1Q01638 556 aa12.56□□□□□ -0.4
SKP2-209ENST00000620197 RBBP4Q09028 425 aa12.56□□□□□ -0.4
SKP2-209ENST00000620197 ZNF852Q6ZMS4 543 aa12.56□□□□□ -0.4
SKP2-209ENST00000620197 RNF130Q86XS8 419 aa12.56□□□□□ -0.4
SKP2-209ENST00000620197 P3H2Q8IVL5 708 aa12.56□□□□□ -0.4
SKP2-209ENST00000620197 C11orf65Q8NCR3 313 aa12.56□□□□□ -0.4
SKP2-209ENST00000620197 ASB15Q8WXK1 588 aa12.56□□□□□ -0.4
SKP2-209ENST00000620197 TPD52L3Q96J77 140 aa12.56□□□□□ -0.4
SKP2-209ENST00000620197 SLC22A12Q96S37 553 aa12.56□□□□□ -0.4
SKP2-209ENST00000620197 MS4A12Q9NXJ0 267 aa12.56□□□□□ -0.4
SKP2-209ENST00000620197 ZNF282Q9UDV7 671 aaPredicted RBP12.56□□□□□ -0.4
SKP2-209ENST00000620197 PCDHGB2Q9Y5G2 931 aa12.56□□□□□ -0.4
SKP2-209ENST00000620197 PLXND1Q9Y4D7 1925 aa12.56□□□□□ -0.4
SKP2-209ENST00000620197 TRAPPC2P0DI81 140 aa12.55□□□□□ -0.4
SKP2-209ENST00000620197 TRAPPC2BP0DI82 140 aa12.55□□□□□ -0.4
SKP2-209ENST00000620197 CXCR2P25025 360 aa12.55□□□□□ -0.4
SKP2-209ENST00000620197 DDOSTP39656 456 aa12.55□□□□□ -0.4
SKP2-209ENST00000620197 ALDH9A1P49189 494 aa12.55□□□□□ -0.4
SKP2-209ENST00000620197 RHAGQ02094 409 aa12.55□□□□□ -0.4
SKP2-209ENST00000620197 DOC2AQ14183 400 aa12.55□□□□□ -0.4
SKP2-209ENST00000620197 LRRC26Q2I0M4 334 aa12.55□□□□□ -0.4
SKP2-209ENST00000620197 MPP7Q5T2T1 576 aa12.55□□□□□ -0.4
SKP2-209ENST00000620197 ANXA8L1Q5VT79 327 aa12.55□□□□□ -0.4
SKP2-209ENST00000620197 NXNL2Q5VZ03 156 aa12.55□□□□□ -0.4
SKP2-209ENST00000620197 ZDHHC20Q5W0Z9 365 aa12.55□□□□□ -0.4
SKP2-209ENST00000620197 PLAG1Q6DJT9 500 aa12.55□□□□□ -0.4
SKP2-209ENST00000620197 ADNP2Q6IQ32 1131 aa12.55□□□□□ -0.4
SKP2-209ENST00000620197 SPATC1Q76KD6 591 aa12.55□□□□□ -0.4
SKP2-209ENST00000620197 RAVER1Q8IY67 606 aaKnown RBP12.55□□□□□ -0.4
SKP2-209ENST00000620197 UPF1Q92900 1129 aaKnown RBP eCLIP12.55□□□□□ -0.42e-6■□□□□ 8.5
SKP2-209ENST00000620197 ARHGAP39Q9C0H5 1083 aa12.55□□□□□ -0.4
SKP2-209ENST00000620197 TAS2R16Q9NYV7 291 aa12.55□□□□□ -0.4
SKP2-209ENST00000620197 AFF4Q9UHB7 1163 aaKnown RBP12.55□□□□□ -0.4
SKP2-209ENST00000620197 CLEC4EQ9ULY5 219 aa12.55□□□□□ -0.4
SKP2-209ENST00000620197 GRIP1Q9Y3R0 1128 aa12.55□□□□□ -0.4
SKP2-209ENST00000620197 N6AMT1Q9Y5N5 214 aa12.55□□□□□ -0.4
SKP2-209ENST00000620197 LRRK1Q38SD2 2015 aa12.55□□□□□ -0.4
SKP2-209ENST00000620197 DNTTP04053 509 aa12.55□□□□□ -0.4
SKP2-209ENST00000620197 SNRPGP62308 76 aaKnown RBP12.55□□□□□ -0.4
SKP2-209ENST00000620197 PTGES3Q15185 160 aaKnown RBP12.55□□□□□ -0.4
SKP2-209ENST00000620197 SF1Q15637 639 aaKnown RBP12.55□□□□□ -0.4
SKP2-209ENST00000620197 PRSS53Q2L4Q9 553 aa12.55□□□□□ -0.4
SKP2-209ENST00000620197 ATAD3CQ5T2N8 411 aa12.55□□□□□ -0.4
SKP2-209ENST00000620197 KLHL17Q6TDP4 642 aa12.55□□□□□ -0.4
SKP2-209ENST00000620197 OR56A3Q8NH54 315 aa12.55□□□□□ -0.4
SKP2-209ENST00000620197 CPEB1Q9BZB8 566 aaKnown RBP12.55□□□□□ -0.4
SKP2-209ENST00000620197 TRPM5Q9NZQ8 1165 aa12.55□□□□□ -0.4
SKP2-209ENST00000620197 FAM172BPA6NC97 362 aa12.54□□□□□ -0.4
SKP2-209ENST00000620197 EFCAB10A6NFE3 127 aa12.54□□□□□ -0.4
SKP2-209ENST00000620197 HOXC11O43248 304 aaPredicted RBP12.54□□□□□ -0.4
SKP2-209ENST00000620197 DLGAP3O95886 979 aa12.54□□□□□ -0.4
SKP2-209ENST00000620197 ATP1B2P14415 290 aaPredicted RBP12.54□□□□□ -0.4
SKP2-209ENST00000620197 ZNF8P17098 575 aaPredicted RBP12.54□□□□□ -0.4
SKP2-209ENST00000620197 CRYBB2P43320 205 aa12.54□□□□□ -0.4
SKP2-209ENST00000620197 CPTPQ5TA50 214 aa12.54□□□□□ -0.4
SKP2-209ENST00000620197 METTL3Q86U44 580 aaKnown RBP12.54□□□□□ -0.4
SKP2-209ENST00000620197 C1orf52Q8N6N3 182 aaKnown RBP12.54□□□□□ -0.4
SKP2-209ENST00000620197 PCSK9Q8NBP7 692 aaKnown RBP12.54□□□□□ -0.4
SKP2-209ENST00000620197 OR52N2Q8NGI0 321 aa12.54□□□□□ -0.4
SKP2-209ENST00000620197 PIP5K1AQ99755 562 aa12.54□□□□□ -0.4
SKP2-209ENST00000620197 C2orf49Q9BVC5 232 aaPredicted RBP12.54□□□□□ -0.4
SKP2-209ENST00000620197 ZW10O43264 779 aa12.54□□□□□ -0.4
SKP2-209ENST00000620197 OR56A5P0C7T3 313 aa12.54□□□□□ -0.4
SKP2-209ENST00000620197 IRF1P10914 325 aa12.54□□□□□ -0.4
SKP2-209ENST00000620197 ITPKAP23677 461 aa12.54□□□□□ -0.4
SKP2-209ENST00000620197 OPRD1P41143 372 aa12.54□□□□□ -0.4
SKP2-209ENST00000620197 NUDT6P53370 316 aa12.54□□□□□ -0.4
SKP2-209ENST00000620197 ACLYP53396 1101 aa12.54□□□□□ -0.4
SKP2-209ENST00000620197 CRHR2Q13324 411 aa12.54□□□□□ -0.4
SKP2-209ENST00000620197 GLYR1Q49A26 553 aaPredicted RBP12.54□□□□□ -0.4
SKP2-209ENST00000620197 IFI44LQ53G44 452 aa12.54□□□□□ -0.4
SKP2-209ENST00000620197 SPIN4Q56A73 249 aa12.54□□□□□ -0.4
SKP2-209ENST00000620197 THOC6Q86W42 341 aaKnown RBP12.54□□□□□ -0.4
SKP2-209ENST00000620197 LGI4Q8N135 537 aa12.54□□□□□ -0.4
SKP2-209ENST00000620197 CPXM2Q8N436 756 aa12.54□□□□□ -0.4
SKP2-209ENST00000620197 OR2AP1Q8NGE2 309 aa12.54□□□□□ -0.4
SKP2-209ENST00000620197 SLC6A18Q96N87 628 aa12.54□□□□□ -0.4
SKP2-209ENST00000620197 MAPKAP1Q9BPZ7 522 aa12.54□□□□□ -0.4
SKP2-209ENST00000620197 RACGAP1Q9H0H5 632 aa12.54□□□□□ -0.4
SKP2-209ENST00000620197 CCDC177Q9NQR7 707 aaPredicted RBP12.54□□□□□ -0.4
SKP2-209ENST00000620197 NFKBIL1Q9UBC1 381 aaPredicted RBP12.54□□□□□ -0.4
SKP2-209ENST00000620197 VPS4AQ9UN37 437 aa12.54□□□□□ -0.4
SKP2-209ENST00000620197 TET1Q8NFU7 2136 aa12.54□□□□□ -0.4
SKP2-209ENST00000620197 PNMA8CA0A1B0GUJ8 204 aa12.54□□□□□ -0.4
SKP2-209ENST00000620197 ARHGEF33A8MVX0 844 aa12.54□□□□□ -0.4
SKP2-209ENST00000620197 CCRL2O00421 344 aa12.54□□□□□ -0.4
SKP2-209ENST00000620197 FFAR1O14842 300 aa12.54□□□□□ -0.4
SKP2-209ENST00000620197 MED26O95402 600 aa12.54□□□□□ -0.4
SKP2-209ENST00000620197 DDX5P17844 614 aaKnown RBP12.54□□□□□ -0.4
SKP2-209ENST00000620197 MAGP20916 626 aa12.54□□□□□ -0.4
SKP2-209ENST00000620197 HNF4AP41235 474 aa12.54□□□□□ -0.4
SKP2-209ENST00000620197 SPINT3P49223 89 aa12.54□□□□□ -0.4
SKP2-209ENST00000620197 DCDC1P59894 354 aa12.54□□□□□ -0.4
SKP2-209ENST00000620197 HBA1P69905 142 aa12.54□□□□□ -0.4
SKP2-209ENST00000620197 RETSATQ6NUM9 610 aa12.54□□□□□ -0.4
SKP2-209ENST00000620197 GDPGP1Q6ZNW5 385 aa12.54□□□□□ -0.4
SKP2-209ENST00000620197 HEATR4Q86WZ0 1026 aa12.54□□□□□ -0.4
SKP2-209ENST00000620197 BBS7Q8IWZ6 715 aa12.54□□□□□ -0.4
SKP2-209ENST00000620197 OR9Q2Q8NGE9 314 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms