RNA–Protein interactions for RNA: ENST00000619644.4

SMTN-223, Transcript of smoothelin, human

TSL 2 BASIC

Gene SMTN, Length 3,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMTN-223	ENST00000619644	TBRG1	Q3YBR2	411 aa		13.91	□□□□□ -0.18
SMTN-223	ENST00000619644	ZNF852	Q6ZMS4	543 aa		13.91	□□□□□ -0.18
SMTN-223	ENST00000619644	PLPP6	Q8IY26	295 aa		13.91	□□□□□ -0.18
SMTN-223	ENST00000619644	C2orf73	Q8N5S3	287 aa	Predicted RBP	13.91	□□□□□ -0.18
SMTN-223	ENST00000619644	SCRN2	Q96FV2	425 aa		13.91	□□□□□ -0.18
SMTN-223	ENST00000619644	CENPO	Q9BU64	300 aa		13.91	□□□□□ -0.18
SMTN-223	ENST00000619644	VN1R3	Q9BXE9	311 aa		13.91	□□□□□ -0.18
SMTN-223	ENST00000619644	IRF2BPL	Q9H1B7	796 aa		13.91	□□□□□ -0.18
SMTN-223	ENST00000619644	RETREG1	Q9H6L5	497 aa		13.91	□□□□□ -0.18
SMTN-223	ENST00000619644	PLXNA4	Q9HCM2	1894 aa		13.91	□□□□□ -0.18
SMTN-223	ENST00000619644	PCDHB11	Q9Y5F2	797 aa		13.91	□□□□□ -0.18
SMTN-223	ENST00000619644	PNMA8C	A0A1B0GUJ8	204 aa		13.91	□□□□□ -0.18
SMTN-223	ENST00000619644	CAPN5	O15484	640 aa	Predicted RBP	13.91	□□□□□ -0.18
SMTN-223	ENST00000619644	RGS5	O15539	181 aa		13.91	□□□□□ -0.18
SMTN-223	ENST00000619644	CBSL	P0DN79	551 aa		13.91	□□□□□ -0.18
SMTN-223	ENST00000619644	JUP	P14923	745 aa		13.91	□□□□□ -0.18
SMTN-223	ENST00000619644	CBS	P35520	551 aa		13.91	□□□□□ -0.18
SMTN-223	ENST00000619644	SLC19A1	P41440	591 aa		13.91	□□□□□ -0.18
SMTN-223	ENST00000619644	WNT3	P56703	355 aa		13.91	□□□□□ -0.18
SMTN-223	ENST00000619644	MEF2A	Q02078	507 aa	Predicted RBP	13.91	□□□□□ -0.18
SMTN-223	ENST00000619644	ELP6	Q0PNE2	266 aa		13.91	□□□□□ -0.18
SMTN-223	ENST00000619644	CDKN3	Q16667	212 aa		13.91	□□□□□ -0.18
SMTN-223	ENST00000619644	ZNF783	Q6ZMS7	281 aa		13.91	□□□□□ -0.18
SMTN-223	ENST00000619644	OR8H2	Q8N162	312 aa		13.91	□□□□□ -0.18
SMTN-223	ENST00000619644	CHCHD4	Q8N4Q1	142 aa		13.91	□□□□□ -0.18
SMTN-223	ENST00000619644	KCNS3	Q9BQ31	491 aa		13.91	□□□□□ -0.18
SMTN-223	ENST00000619644	ZNF556	Q9HAH1	456 aa		13.91	□□□□□ -0.18
SMTN-223	ENST00000619644	RUVBL1	Q9Y265	456 aa	Known RBP	13.91	□□□□□ -0.18
SMTN-223	ENST00000619644	PCDHGB3	Q9Y5G1	929 aa		13.91	□□□□□ -0.18
SMTN-223	ENST00000619644	LYVE1	Q9Y5Y7	322 aa		13.91	□□□□□ -0.18
SMTN-223	ENST00000619644	KCNE1B	A0A087WTH5	132 aa		13.9	□□□□□ -0.18
SMTN-223	ENST00000619644	LOC110117498-PIK3R3	F6TDL0	507 aa		13.9	□□□□□ -0.18
SMTN-223	ENST00000619644	TLL1	O43897	1013 aa		13.9	□□□□□ -0.18
SMTN-223	ENST00000619644	ICMT	O60725	284 aa		13.9	□□□□□ -0.18
SMTN-223	ENST00000619644	SOCS5	O75159	536 aa		13.9	□□□□□ -0.18
SMTN-223	ENST00000619644	CYP7B1	O75881	506 aa		13.9	□□□□□ -0.18
SMTN-223	ENST00000619644	SRC	P12931	536 aa		13.9	□□□□□ -0.18
SMTN-223	ENST00000619644	GPX2	P18283	190 aa		13.9	□□□□□ -0.18
SMTN-223	ENST00000619644	NAT1	P18440	290 aa		13.9	□□□□□ -0.18
SMTN-223	ENST00000619644	HNMT	P50135	292 aa		13.9	□□□□□ -0.18
SMTN-223	ENST00000619644	CRISP3	P54108	245 aa		13.9	□□□□□ -0.18
SMTN-223	ENST00000619644	PFN3	P60673	137 aa		13.9	□□□□□ -0.18
SMTN-223	ENST00000619644	MC1R	Q01726	317 aa		13.9	□□□□□ -0.18
SMTN-223	ENST00000619644	MADCAM1	Q13477	382 aa		13.9	□□□□□ -0.18
SMTN-223	ENST00000619644	TBCE	Q15813	527 aa	Predicted RBP	13.9	□□□□□ -0.18
SMTN-223	ENST00000619644	CEP78	Q5JTW2	689 aa		13.9	□□□□□ -0.18
SMTN-223	ENST00000619644	COX20	Q5RI15	118 aa		13.9	□□□□□ -0.18
SMTN-223	ENST00000619644	LIN28B	Q6ZN17	250 aa	Known RBP eCLIP	13.9	□□□□□ -0.18
SMTN-223	ENST00000619644	RASSF5	Q8WWW0	418 aa		13.9	□□□□□ -0.18
SMTN-223	ENST00000619644	OVCA2	Q8WZ82	227 aa		13.9	□□□□□ -0.18
SMTN-223	ENST00000619644	TMEM159	Q96B96	161 aa		13.9	□□□□□ -0.18
SMTN-223	ENST00000619644	ARPC5L	Q9BPX5	153 aa		13.9	□□□□□ -0.18
SMTN-223	ENST00000619644	TRIM39	Q9HCM9	518 aa		13.9	□□□□□ -0.18
SMTN-223	ENST00000619644	IL1RN	P18510	177 aa		13.9	□□□□□ -0.18
SMTN-223	ENST00000619644	XPA	P23025	273 aa	Predicted RBP	13.9	□□□□□ -0.18
SMTN-223	ENST00000619644	CHI3L1	P36222	383 aa	Predicted RBP	13.9	□□□□□ -0.18
SMTN-223	ENST00000619644	MAPK8	P45983	427 aa		13.9	□□□□□ -0.18
SMTN-223	ENST00000619644	UGT2B15	P54855	530 aa		13.9	□□□□□ -0.18
SMTN-223	ENST00000619644	ITGA1	P56199	1179 aa		13.9	□□□□□ -0.18
SMTN-223	ENST00000619644	P2RX3	P56373	397 aa		13.9	□□□□□ -0.18
SMTN-223	ENST00000619644	PPIG	Q13427	754 aa	Known RBP eCLIP	13.9	□□□□□ -0.18	1e-6	■■■□□ 16.7
SMTN-223	ENST00000619644	PRR23C	Q6ZRP0	262 aa		13.9	□□□□□ -0.18
SMTN-223	ENST00000619644	TAGAP	Q8N103	731 aa		13.9	□□□□□ -0.18
SMTN-223	ENST00000619644	LGI4	Q8N135	537 aa		13.9	□□□□□ -0.18
SMTN-223	ENST00000619644	ZNF366	Q8N895	744 aa		13.9	□□□□□ -0.18
SMTN-223	ENST00000619644	C11orf65	Q8NCR3	313 aa		13.9	□□□□□ -0.18
SMTN-223	ENST00000619644	NFKBID	Q8NI38	313 aa		13.9	□□□□□ -0.18
SMTN-223	ENST00000619644	ZNF675	Q8TD23	568 aa		13.9	□□□□□ -0.18
SMTN-223	ENST00000619644	HCAR2	Q8TDS4	363 aa		13.9	□□□□□ -0.18
SMTN-223	ENST00000619644	MYDGF	Q969H8	173 aa		13.9	□□□□□ -0.18
SMTN-223	ENST00000619644	CEP19	Q96LK0	163 aa		13.9	□□□□□ -0.18
SMTN-223	ENST00000619644	NIPSNAP1	Q9BPW8	284 aa		13.9	□□□□□ -0.18
SMTN-223	ENST00000619644	TSEN34	Q9BSV6	310 aa	Known RBP	13.9	□□□□□ -0.18
SMTN-223	ENST00000619644	MRPL17	Q9NRX2	175 aa	Known RBP	13.9	□□□□□ -0.18
SMTN-223	ENST00000619644	CRNN	Q9UBG3	495 aa	Predicted RBP	13.9	□□□□□ -0.18
SMTN-223	ENST00000619644	RAB23	Q9ULC3	237 aa		13.9	□□□□□ -0.18
SMTN-223	ENST00000619644	LOC101059915	A0A1B0GWI6	518 aa	Predicted RBP	13.9	□□□□□ -0.18
SMTN-223	ENST00000619644	TGFB1	P01137	390 aa		13.9	□□□□□ -0.18
SMTN-223	ENST00000619644	ENDOU	P21128	410 aa	Known RBP	13.9	□□□□□ -0.18
SMTN-223	ENST00000619644	CST5	P28325	142 aa	Predicted RBP	13.9	□□□□□ -0.18
SMTN-223	ENST00000619644	ETV3	P41162	512 aa		13.9	□□□□□ -0.18
SMTN-223	ENST00000619644	RECQL	P46063	649 aa	Predicted RBP	13.9	□□□□□ -0.18
SMTN-223	ENST00000619644	RPS13	P62277	151 aa	Known RBP	13.9	□□□□□ -0.18
SMTN-223	ENST00000619644	ST3GAL4	Q11206	333 aa		13.9	□□□□□ -0.18
SMTN-223	ENST00000619644	RGN	Q15493	299 aa		13.9	□□□□□ -0.18
SMTN-223	ENST00000619644	ARMCX4	Q5H9R4	360 aa		13.9	□□□□□ -0.18
SMTN-223	ENST00000619644	AGTRAP	Q6RW13	159 aa		13.9	□□□□□ -0.18
SMTN-223	ENST00000619644	CCDC190	Q86UF4	302 aa		13.9	□□□□□ -0.18
SMTN-223	ENST00000619644	C11orf74	Q86VG3	221 aa		13.9	□□□□□ -0.18
SMTN-223	ENST00000619644	NPAS3	Q8IXF0	933 aa		13.9	□□□□□ -0.18
SMTN-223	ENST00000619644	REM2	Q8IYK8	340 aa	Predicted RBP	13.9	□□□□□ -0.18
SMTN-223	ENST00000619644	CADM2	Q8N3J6	435 aa		13.9	□□□□□ -0.18
SMTN-223	ENST00000619644	ADAMTS19	Q8TE59	1207 aa		13.9	□□□□□ -0.18
SMTN-223	ENST00000619644	ASZ1	Q8WWH4	475 aa		13.9	□□□□□ -0.18
SMTN-223	ENST00000619644	PIK3R3	Q92569	461 aa		13.9	□□□□□ -0.18
SMTN-223	ENST00000619644	MRPS31	Q92665	395 aa	Known RBP	13.9	□□□□□ -0.18
SMTN-223	ENST00000619644	IGSF21	Q96ID5	467 aa		13.9	□□□□□ -0.18
SMTN-223	ENST00000619644	PHOX2B	Q99453	314 aa		13.9	□□□□□ -0.18
SMTN-223	ENST00000619644	MTG2	Q9H4K7	406 aa		13.9	□□□□□ -0.18
SMTN-223	ENST00000619644	GIMAP4	Q9NUV9	329 aa		13.9	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms