RNA–Protein interactions for RNA: ENST00000618534.4

NEK3-208, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene NEK3, Length 2,414 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-208ENST00000618534 MED22Q15528 200 aa19.58■□□□□ 0.72
NEK3-208ENST00000618534 TSTQ16762 297 aaKnown RBP19.58■□□□□ 0.72
NEK3-208ENST00000618534 OR7G3Q8NG95 312 aa19.58■□□□□ 0.72
NEK3-208ENST00000618534 HUS1BQ8NHY5 278 aa19.58■□□□□ 0.72
NEK3-208ENST00000618534 CHTF18Q8WVB6 975 aa19.58■□□□□ 0.72
NEK3-208ENST00000618534 CAPSLQ8WWF8 208 aa19.58■□□□□ 0.72
NEK3-208ENST00000618534 STOX2Q9P2F5 926 aaPredicted RBP19.58■□□□□ 0.72
NEK3-208ENST00000618534 KLK4Q9Y5K2 254 aa19.58■□□□□ 0.72
NEK3-208ENST00000618534 ALPK3Q96L96 1907 aa19.58■□□□□ 0.72
NEK3-208ENST00000618534 LOC101059915A0A1B0GWI6 518 aaPredicted RBP19.57■□□□□ 0.72
NEK3-208ENST00000618534 RNASET2O00584 256 aaKnown RBP19.57■□□□□ 0.72
NEK3-208ENST00000618534 PTX3P26022 381 aaPredicted RBP19.57■□□□□ 0.72
NEK3-208ENST00000618534 TIA1P31483 386 aaKnown RBP eCLIP19.57■□□□□ 0.72
NEK3-208ENST00000618534 KCNC3Q14003 757 aa19.57■□□□□ 0.72
NEK3-208ENST00000618534 DMC1Q14565 340 aa19.57■□□□□ 0.72
NEK3-208ENST00000618534 SPANXN2Q5MJ10 180 aa19.57■□□□□ 0.72
NEK3-208ENST00000618534 GCNT6Q5T4J0 391 aa19.57■□□□□ 0.72
NEK3-208ENST00000618534 C22orf39Q6P5X5 142 aa19.57■□□□□ 0.72
NEK3-208ENST00000618534 SAMD11Q96NU1 681 aa19.57■□□□□ 0.72
NEK3-208ENST00000618534 FAM129BQ96TA1 746 aa19.57■□□□□ 0.72
NEK3-208ENST00000618534 SDHCQ99643 169 aaPredicted RBP19.57■□□□□ 0.72
NEK3-208ENST00000618534 KCNS3Q9BQ31 491 aa19.57■□□□□ 0.72
NEK3-208ENST00000618534 SLX1AQ9BQ83 275 aa19.57■□□□□ 0.72
NEK3-208ENST00000618534 SLC35A5Q9BS91 424 aa19.57■□□□□ 0.72
NEK3-208ENST00000618534 NUAK2Q9H093 628 aa19.57■□□□□ 0.72
NEK3-208ENST00000618534 ZNF556Q9HAH1 456 aa19.57■□□□□ 0.72
NEK3-208ENST00000618534 STARD7Q9NQZ5 370 aa19.57■□□□□ 0.72
NEK3-208ENST00000618534 FBXL12Q9NXK8 326 aa19.57■□□□□ 0.72
NEK3-208ENST00000618534 SNX8Q9Y5X2 465 aa19.57■□□□□ 0.72
NEK3-208ENST00000618534 PLK4O00444 970 aa19.57■□□□□ 0.72
NEK3-208ENST00000618534 HOXA2O43364 376 aa19.57■□□□□ 0.72
NEK3-208ENST00000618534 C6orf47O95873 294 aa19.57■□□□□ 0.72
NEK3-208ENST00000618534 SOX6P35712 828 aa19.57■□□□□ 0.72
NEK3-208ENST00000618534 BDKRB1P46663 353 aa19.57■□□□□ 0.72
NEK3-208ENST00000618534 RPS13P62277 151 aaKnown RBP19.57■□□□□ 0.72
NEK3-208ENST00000618534 CCDC190Q86UF4 302 aa19.57■□□□□ 0.72
NEK3-208ENST00000618534 ASZ1Q8WWH4 475 aa19.57■□□□□ 0.72
NEK3-208ENST00000618534 ZNF486Q96H40 463 aaPredicted RBP19.57■□□□□ 0.72
NEK3-208ENST00000618534 METTL2AQ96IZ6 378 aaKnown RBP19.57■□□□□ 0.72
NEK3-208ENST00000618534 ZIC5Q96T25 663 aa19.57■□□□□ 0.72
NEK3-208ENST00000618534 TMEM121BQ9BXQ6 578 aaPredicted RBP19.57■□□□□ 0.72
NEK3-208ENST00000618534 THSD1Q9NS62 852 aa19.57■□□□□ 0.72
NEK3-208ENST00000618534 C14orf119Q9NWQ9 140 aa19.57■□□□□ 0.72
NEK3-208ENST00000618534 CTDSP2O14595 271 aa19.56■□□□□ 0.72
NEK3-208ENST00000618534 KPNA5O15131 536 aa19.56■□□□□ 0.72
NEK3-208ENST00000618534 ZW10O43264 779 aa19.56■□□□□ 0.72
NEK3-208ENST00000618534 GBAP04062 536 aa19.56■□□□□ 0.72
NEK3-208ENST00000618534 SLC10A3P09131 477 aa19.56■□□□□ 0.72
NEK3-208ENST00000618534 TCEA1P23193 301 aaKnown RBP19.56■□□□□ 0.72
NEK3-208ENST00000618534 ETV6P41212 452 aa19.56■□□□□ 0.72
NEK3-208ENST00000618534 PIK3CBP42338 1070 aa19.56■□□□□ 0.72
NEK3-208ENST00000618534 GANABQ14697 944 aaKnown RBP19.56■□□□□ 0.72
NEK3-208ENST00000618534 PTGES3Q15185 160 aaKnown RBP19.56■□□□□ 0.72
NEK3-208ENST00000618534 SPIN4Q56A73 249 aa19.56■□□□□ 0.72
NEK3-208ENST00000618534 METTL3Q86U44 580 aaKnown RBP19.56■□□□□ 0.72
NEK3-208ENST00000618534 ATCAYQ86WG3 371 aa19.56■□□□□ 0.72
NEK3-208ENST00000618534 MGLLQ99685 303 aa19.56■□□□□ 0.72
NEK3-208ENST00000618534 LSM7Q9UK45 103 aaKnown RBP19.56■□□□□ 0.72
NEK3-208ENST00000618534 MKLN1Q9UL63 735 aa19.56■□□□□ 0.72
NEK3-208ENST00000618534 OLFM2O95897 454 aa19.56■□□□□ 0.72
NEK3-208ENST00000618534 ZNF8P17098 575 aaPredicted RBP19.56■□□□□ 0.72
NEK3-208ENST00000618534 PREPP48147 710 aa19.56■□□□□ 0.72
NEK3-208ENST00000618534 DEFA1P59665 94 aa19.56■□□□□ 0.72
NEK3-208ENST00000618534 DEFA3P59666 94 aa19.56■□□□□ 0.72
NEK3-208ENST00000618534 CYP4F8P98187 520 aa19.56■□□□□ 0.72
NEK3-208ENST00000618534 ZDHHC20Q5W0Z9 365 aa19.56■□□□□ 0.72
NEK3-208ENST00000618534 DPY19L3Q6ZPD9 716 aa19.56■□□□□ 0.72
NEK3-208ENST00000618534 OTOP2Q7RTS6 562 aa19.56■□□□□ 0.72
NEK3-208ENST00000618534 NLRP8Q86W28 1048 aa19.56■□□□□ 0.72
NEK3-208ENST00000618534 LILRA3Q8N6C8 439 aaPredicted RBP19.56■□□□□ 0.72
NEK3-208ENST00000618534 SLC43A3Q8NBI5 491 aa19.56■□□□□ 0.72
NEK3-208ENST00000618534 IL17RDQ8NFM7 739 aa19.56■□□□□ 0.72
NEK3-208ENST00000618534 FIBINQ8TAL6 211 aa19.56■□□□□ 0.72
NEK3-208ENST00000618534 ACER3Q9NUN7 267 aa19.56■□□□□ 0.72
NEK3-208ENST00000618534 CFAP97Q9P2B7 532 aa19.56■□□□□ 0.72
NEK3-208ENST00000618534 PRAMEF33A0A0G2JMD5 474 aa19.55■□□□□ 0.72
NEK3-208ENST00000618534 PNMA8CA0A1B0GUJ8 204 aa19.55■□□□□ 0.72
NEK3-208ENST00000618534 PRAMEF10O60809 474 aa19.55■□□□□ 0.72
NEK3-208ENST00000618534 PSIP1O75475 530 aaKnown RBP19.55■□□□□ 0.72
NEK3-208ENST00000618534 SLCO2B1O94956 709 aa19.55■□□□□ 0.72
NEK3-208ENST00000618534 KRR1Q13601 381 aaKnown RBP19.55■□□□□ 0.72
NEK3-208ENST00000618534 TPGS2Q68CL5 300 aa19.55■□□□□ 0.72
NEK3-208ENST00000618534 OR52N2Q8NGI0 321 aa19.55■□□□□ 0.72
NEK3-208ENST00000618534 C9orf43Q8TAL5 461 aaPredicted RBP19.55■□□□□ 0.72
NEK3-208ENST00000618534 CIDECQ96AQ7 238 aaPredicted RBP19.55■□□□□ 0.72
NEK3-208ENST00000618534 IGSF21Q96ID5 467 aa19.55■□□□□ 0.72
NEK3-208ENST00000618534 YME1L1Q96TA2 773 aa19.55■□□□□ 0.72
NEK3-208ENST00000618534 CDCA4Q9BXL8 241 aa19.55■□□□□ 0.72
NEK3-208ENST00000618534 IL21Q9HBE4 155 aa19.55■□□□□ 0.72
NEK3-208ENST00000618534 TRIM39Q9HCM9 518 aa19.55■□□□□ 0.72
NEK3-208ENST00000618534 ERVK13-1Q9NX77 482 aa19.55■□□□□ 0.72
NEK3-208ENST00000618534 RNF186Q9NXI6 227 aa19.55■□□□□ 0.72
NEK3-208ENST00000618534 OGDHLQ9ULD0 1010 aa19.55■□□□□ 0.72
NEK3-208ENST00000618534 CFL2Q9Y281 166 aa19.55■□□□□ 0.72
NEK3-208ENST00000618534 ARHGAP33O14559 1287 aa19.55■□□□□ 0.72
NEK3-208ENST00000618534 SNX4O95219 450 aa19.55■□□□□ 0.72
NEK3-208ENST00000618534 ITGA2P17301 1181 aa19.55■□□□□ 0.72
NEK3-208ENST00000618534 XCR1P46094 333 aa19.55■□□□□ 0.72
NEK3-208ENST00000618534 PRIM2P49643 509 aa19.55■□□□□ 0.72
NEK3-208ENST00000618534 DGKEP52429 567 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms