RNA–Protein interactions for RNA: ENST00000617482.4

C11orf54-215, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 3 BASIC

Gene C11orf54, Length 2,417 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-215ENST00000617482 BRAT1Q6PJG6 821 aa11.33□□□□□ -0.6
C11orf54-215ENST00000617482 SYTL1Q8IYJ3 562 aa11.33□□□□□ -0.6
C11orf54-215ENST00000617482 LGI4Q8N135 537 aa11.33□□□□□ -0.6
C11orf54-215ENST00000617482 ZNF675Q8TD23 568 aa11.33□□□□□ -0.6
C11orf54-215ENST00000617482 BTN2A2Q8WVV5 523 aa11.33□□□□□ -0.6
C11orf54-215ENST00000617482 HTRA1Q92743 480 aa11.33□□□□□ -0.6
C11orf54-215ENST00000617482 GTPBP3Q969Y2 492 aaKnown RBP11.33□□□□□ -0.6
C11orf54-215ENST00000617482 LINC00597Q9H2U6 94 aa11.33□□□□□ -0.6
C11orf54-215ENST00000617482 OR51B5Q9H339 312 aa11.33□□□□□ -0.6
C11orf54-215ENST00000617482 TRIM39Q9HCM9 518 aa11.33□□□□□ -0.6
C11orf54-215ENST00000617482 HCFC1R1Q9NWW0 138 aa11.33□□□□□ -0.6
C11orf54-215ENST00000617482 ZNF226Q9NYT6 803 aa11.33□□□□□ -0.6
C11orf54-215ENST00000617482 SCHIP1Q9P0W5 487 aaPredicted RBP11.33□□□□□ -0.6
C11orf54-215ENST00000617482 SH2B3Q9UQQ2 575 aa11.33□□□□□ -0.6
C11orf54-215ENST00000617482 PCDHGA2Q9Y5H1 932 aa11.33□□□□□ -0.6
C11orf54-215ENST00000617482 KCNE2Q9Y6J6 123 aa11.33□□□□□ -0.6
C11orf54-215ENST00000617482 TLL1O43897 1013 aa11.32□□□□□ -0.6
C11orf54-215ENST00000617482 ALOX5P09917 674 aa11.32□□□□□ -0.6
C11orf54-215ENST00000617482 CYP2A6P11509 494 aaPredicted RBP11.32□□□□□ -0.6
C11orf54-215ENST00000617482 HSD3B1P14060 373 aa11.32□□□□□ -0.6
C11orf54-215ENST00000617482 TIMP2P16035 220 aa11.32□□□□□ -0.6
C11orf54-215ENST00000617482 ZNF30P17039 623 aa11.32□□□□□ -0.6
C11orf54-215ENST00000617482 MAGP20916 626 aa11.32□□□□□ -0.6
C11orf54-215ENST00000617482 HSD3B2P26439 372 aa11.32□□□□□ -0.6
C11orf54-215ENST00000617482 CCR2P41597 374 aa11.32□□□□□ -0.6
C11orf54-215ENST00000617482 ST3GAL4Q11206 333 aa11.32□□□□□ -0.6
C11orf54-215ENST00000617482 TMEM115Q12893 351 aaPredicted RBP11.32□□□□□ -0.6
C11orf54-215ENST00000617482 GANABQ14697 944 aaKnown RBP11.32□□□□□ -0.6
C11orf54-215ENST00000617482 CARTPTQ16568 116 aa11.32□□□□□ -0.6
C11orf54-215ENST00000617482 MICAQ29983 383 aa11.32□□□□□ -0.6
C11orf54-215ENST00000617482 IFI44LQ53G44 452 aa11.32□□□□□ -0.6
C11orf54-215ENST00000617482 TMEM215Q68D42 235 aa11.32□□□□□ -0.6
C11orf54-215ENST00000617482 MED27Q6P2C8 311 aa11.32□□□□□ -0.6
C11orf54-215ENST00000617482 TMEM220Q6QAJ8 160 aa11.32□□□□□ -0.6
C11orf54-215ENST00000617482 SLCO4C1Q6ZQN7 724 aa11.32□□□□□ -0.6
C11orf54-215ENST00000617482 CAMKMTQ7Z624 323 aa11.32□□□□□ -0.6
C11orf54-215ENST00000617482 ZNF605Q86T29 641 aa11.32□□□□□ -0.6
C11orf54-215ENST00000617482 DDX53Q86TM3 631 aaKnown RBP11.32□□□□□ -0.6
C11orf54-215ENST00000617482 ADIPOR2Q86V24 386 aa11.32□□□□□ -0.6
C11orf54-215ENST00000617482 STX19Q8N4C7 294 aa11.32□□□□□ -0.6
C11orf54-215ENST00000617482 ZNF366Q8N895 744 aa11.32□□□□□ -0.6
C11orf54-215ENST00000617482 MINDY2Q8NBR6 621 aa11.32□□□□□ -0.6
C11orf54-215ENST00000617482 OR56A3Q8NH54 315 aa11.32□□□□□ -0.6
C11orf54-215ENST00000617482 WDR48Q8TAF3 677 aa11.32□□□□□ -0.6
C11orf54-215ENST00000617482 HEPHQ9BQS7 1158 aa11.32□□□□□ -0.6
C11orf54-215ENST00000617482 CEP44Q9C0F1 390 aa11.32□□□□□ -0.6
C11orf54-215ENST00000617482 MIR1-1HGQ9H1L0 117 aa11.32□□□□□ -0.6
C11orf54-215ENST00000617482 OR51E2Q9H255 320 aa11.32□□□□□ -0.6
C11orf54-215ENST00000617482 REEP4Q9H6H4 257 aa11.32□□□□□ -0.6
C11orf54-215ENST00000617482 CREBZFQ9NS37 354 aa11.32□□□□□ -0.6
C11orf54-215ENST00000617482 TAS2R16Q9NYV7 291 aa11.32□□□□□ -0.6
C11orf54-215ENST00000617482 PCDH17O14917 1159 aa11.31□□□□□ -0.6
C11orf54-215ENST00000617482 CCL16O15467 120 aa11.31□□□□□ -0.6
C11orf54-215ENST00000617482 TBX1O43435 398 aa11.31□□□□□ -0.6
C11orf54-215ENST00000617482 ATG13O75143 517 aa11.31□□□□□ -0.6
C11orf54-215ENST00000617482 CNOT3O75175 753 aaKnown RBP11.31□□□□□ -0.6
C11orf54-215ENST00000617482 TNFRSF21O75509 655 aa11.31□□□□□ -0.6
C11orf54-215ENST00000617482 PTHP01270 115 aa11.31□□□□□ -0.6
C11orf54-215ENST00000617482 EIF2DP41214 584 aaKnown RBP11.31□□□□□ -0.6
C11orf54-215ENST00000617482 ZNF284Q2VY69 593 aa11.31□□□□□ -0.6
C11orf54-215ENST00000617482 GCNT6Q5T4J0 391 aa11.31□□□□□ -0.6
C11orf54-215ENST00000617482 AGAP7PQ5VUJ5 663 aa11.31□□□□□ -0.6
C11orf54-215ENST00000617482 COMMD6Q7Z4G1 85 aa11.31□□□□□ -0.6
C11orf54-215ENST00000617482 RNF130Q86XS8 419 aa11.31□□□□□ -0.6
C11orf54-215ENST00000617482 NLGN4XQ8N0W4 816 aa11.31□□□□□ -0.6
C11orf54-215ENST00000617482 TRAM1L1Q8N609 369 aa11.31□□□□□ -0.6
C11orf54-215ENST00000617482 FCGR1BQ92637 280 aa11.31□□□□□ -0.6
C11orf54-215ENST00000617482 ITPKCQ96DU7 683 aa11.31□□□□□ -0.6
C11orf54-215ENST00000617482 PSD2Q9BQI7 771 aa11.31□□□□□ -0.6
C11orf54-215ENST00000617482 CCM2Q9BSQ5 444 aa11.31□□□□□ -0.6
C11orf54-215ENST00000617482 ZSCAN5AQ9BUG6 496 aa11.31□□□□□ -0.6
C11orf54-215ENST00000617482 KLHL25Q9H0H3 589 aa11.31□□□□□ -0.6
C11orf54-215ENST00000617482 MS4A12Q9NXJ0 267 aa11.31□□□□□ -0.6
C11orf54-215ENST00000617482 RHCGQ9UBD6 479 aa11.31□□□□□ -0.6
C11orf54-215ENST00000617482 SLC5A10A0PJK1 596 aa11.31□□□□□ -0.6
C11orf54-215ENST00000617482 ZNF197O14709 1029 aa11.31□□□□□ -0.6
C11orf54-215ENST00000617482 C8AP07357 584 aa11.31□□□□□ -0.6
C11orf54-215ENST00000617482 CTSLP07711 333 aa11.31□□□□□ -0.6
C11orf54-215ENST00000617482 TYRP14679 529 aa11.31□□□□□ -0.6
C11orf54-215ENST00000617482 NPPBP16860 134 aa11.31□□□□□ -0.6
C11orf54-215ENST00000617482 XPAP23025 273 aaPredicted RBP11.31□□□□□ -0.6
C11orf54-215ENST00000617482 CHI3L1P36222 383 aaPredicted RBP11.31□□□□□ -0.6
C11orf54-215ENST00000617482 TUBA1BP68363 451 aa11.31□□□□□ -0.6
C11orf54-215ENST00000617482 DEFB103AP81534 67 aa11.31□□□□□ -0.6
C11orf54-215ENST00000617482 ZNF763Q0D2J5 394 aa11.31□□□□□ -0.6
C11orf54-215ENST00000617482 C2orf80Q0P641 193 aa11.31□□□□□ -0.6
C11orf54-215ENST00000617482 STARD3Q14849 445 aa11.31□□□□□ -0.6
C11orf54-215ENST00000617482 TBCEQ15813 527 aaPredicted RBP11.31□□□□□ -0.6
C11orf54-215ENST00000617482 SLC5A12Q1EHB4 618 aa11.31□□□□□ -0.6
C11orf54-215ENST00000617482 MPEG1Q2M385 716 aa11.31□□□□□ -0.6
C11orf54-215ENST00000617482 TUBA1AQ71U36 451 aa11.31□□□□□ -0.6
C11orf54-215ENST00000617482 CFAP206Q8IYR0 622 aa11.31□□□□□ -0.6
C11orf54-215ENST00000617482 OR4C15Q8NGM1 316 aa11.31□□□□□ -0.6
C11orf54-215ENST00000617482 ZNF480Q8WV37 535 aa11.31□□□□□ -0.6
C11orf54-215ENST00000617482 GLYATL1Q969I3 302 aa11.31□□□□□ -0.6
C11orf54-215ENST00000617482 METTL2AQ96IZ6 378 aaKnown RBP11.31□□□□□ -0.6
C11orf54-215ENST00000617482 FOPNLQ96NB1 174 aa11.31□□□□□ -0.6
C11orf54-215ENST00000617482 CHCHD6Q9BRQ6 235 aa11.31□□□□□ -0.6
C11orf54-215ENST00000617482 BHLHE41Q9C0J9 482 aaPredicted RBP11.31□□□□□ -0.6
C11orf54-215ENST00000617482 ROGDIQ9GZN7 287 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms