RNA–Protein interactions for RNA: ENST00000617432.4

CUL3-216, Transcript of cullin 3, humanhuman

TSL 5 BASIC

Gene CUL3, Length 1,426 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-216ENST00000617432 FBXO8Q9NRD0 319 aa4.4□□□□□ -1.7
CUL3-216ENST00000617432 TREX1Q9NSU2 369 aa4.4□□□□□ -1.7
CUL3-216ENST00000617432 TBCCD1Q9NVR7 557 aa4.4□□□□□ -1.7
CUL3-216ENST00000617432 SOHLH2Q9NX45 425 aa4.4□□□□□ -1.7
CUL3-216ENST00000617432 SEMA5BQ9P283 1151 aa4.4□□□□□ -1.7
CUL3-216ENST00000617432 PAK5Q9P286 719 aa4.4□□□□□ -1.7
CUL3-216ENST00000617432 POMT2Q9UKY4 750 aa4.4□□□□□ -1.7
CUL3-216ENST00000617432 G3BP2Q9UN86 482 aaKnown RBP4.4□□□□□ -1.7
CUL3-216ENST00000617432 TDRKHQ9Y2W6 561 aaKnown RBP4.4□□□□□ -1.7
CUL3-216ENST00000617432 TMEM184BQ9Y519 407 aaPredicted RBP4.4□□□□□ -1.7
CUL3-216ENST00000617432 RPS6KL1Q9Y6S9 549 aa4.4□□□□□ -1.7
CUL3-216ENST00000617432 HEATR9A2RTY3 570 aa4.39□□□□□ -1.71
CUL3-216ENST00000617432 TLCD2A6NGC4 264 aa4.39□□□□□ -1.71
CUL3-216ENST00000617432 EIF4E1BA6NMX2 242 aaKnown RBP4.39□□□□□ -1.71
CUL3-216ENST00000617432 KATNA1O75449 491 aa4.39□□□□□ -1.71
CUL3-216ENST00000617432 VAPBO95292 243 aa4.39□□□□□ -1.71
CUL3-216ENST00000617432 NTN1O95631 604 aa4.39□□□□□ -1.71
CUL3-216ENST00000617432 KRT14P02533 472 aa4.39□□□□□ -1.71
CUL3-216ENST00000617432 RALBP11234 206 aa4.39□□□□□ -1.71
CUL3-216ENST00000617432 FGF5P12034 268 aa4.39□□□□□ -1.71
CUL3-216ENST00000617432 UGT2B7P16662 529 aa4.39□□□□□ -1.71
CUL3-216ENST00000617432 CDH3P22223 829 aa4.39□□□□□ -1.71
CUL3-216ENST00000617432 ADRA1DP25100 572 aa4.39□□□□□ -1.71
CUL3-216ENST00000617432 CD82P27701 267 aa4.39□□□□□ -1.71
CUL3-216ENST00000617432 PRDX3P30048 256 aaKnown RBP4.39□□□□□ -1.71
CUL3-216ENST00000617432 GABRA4P48169 554 aa4.39□□□□□ -1.71
CUL3-216ENST00000617432 EIF3BP55884 814 aaKnown RBP4.39□□□□□ -1.71
CUL3-216ENST00000617432 POLE2P56282 527 aa4.39□□□□□ -1.71
CUL3-216ENST00000617432 PRAMEP78395 509 aa4.39□□□□□ -1.71
CUL3-216ENST00000617432 MPP1Q00013 466 aa4.39□□□□□ -1.71
CUL3-216ENST00000617432 HSPA14Q0VDF9 509 aa4.39□□□□□ -1.71
CUL3-216ENST00000617432 ERV3-1Q14264 604 aa4.39□□□□□ -1.71
CUL3-216ENST00000617432 FASTKQ14296 549 aaKnown RBP4.39□□□□□ -1.71
CUL3-216ENST00000617432 KRT33BQ14525 404 aa4.39□□□□□ -1.71
CUL3-216ENST00000617432 ITIH4Q14624 930 aa4.39□□□□□ -1.71
CUL3-216ENST00000617432 DEFB109BQ30KR1 87 aa4.39□□□□□ -1.71
CUL3-216ENST00000617432 PTCHD3Q3KNS1 767 aa4.39□□□□□ -1.71
CUL3-216ENST00000617432 GPR33Q49SQ1 333 aa4.39□□□□□ -1.71
CUL3-216ENST00000617432 C19orf54Q5BKX5 351 aa4.39□□□□□ -1.71
CUL3-216ENST00000617432 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.39□□□□□ -1.71
CUL3-216ENST00000617432 C1orf189Q5VU69 101 aa4.39□□□□□ -1.71
CUL3-216ENST00000617432 PACS1Q6VY07 963 aa4.39□□□□□ -1.71
CUL3-216ENST00000617432 CDHR3Q6ZTQ4 885 aa4.39□□□□□ -1.71
CUL3-216ENST00000617432 DENND6AQ8IWF6 608 aa4.39□□□□□ -1.71
CUL3-216ENST00000617432 TMEM132CQ8N3T6 1108 aa4.39□□□□□ -1.71
CUL3-216ENST00000617432 RASGEF1CQ8N431 466 aa4.39□□□□□ -1.71
CUL3-216ENST00000617432 SIDT2Q8NBJ9 832 aaKnown RBP4.39□□□□□ -1.71
CUL3-216ENST00000617432 ACVR1CQ8NER5 493 aa4.39□□□□□ -1.71
CUL3-216ENST00000617432 PPHLN1Q8NEY8 458 aaKnown RBP4.39□□□□□ -1.71
CUL3-216ENST00000617432 TRIM58Q8NG06 486 aa4.39□□□□□ -1.71
CUL3-216ENST00000617432 OR4L1Q8NH43 312 aa4.39□□□□□ -1.71
CUL3-216ENST00000617432 DENND1AQ8TEH3 1009 aa4.39□□□□□ -1.71
CUL3-216ENST00000617432 LCN9Q8WX39 176 aa4.39□□□□□ -1.71
CUL3-216ENST00000617432 TFGQ92734 400 aaPredicted RBP4.39□□□□□ -1.71
CUL3-216ENST00000617432 ZNF514Q96K75 400 aaPredicted RBP4.39□□□□□ -1.71
CUL3-216ENST00000617432 CAPZA3Q96KX2 299 aa4.39□□□□□ -1.71
CUL3-216ENST00000617432 TRAPPC9Q96Q05 1148 aa4.39□□□□□ -1.71
CUL3-216ENST00000617432 OR2A14Q96R47 310 aa4.39□□□□□ -1.71
CUL3-216ENST00000617432 OSBPL9Q96SU4 736 aa4.39□□□□□ -1.71
CUL3-216ENST00000617432 MESP1Q9BRJ9 268 aa4.39□□□□□ -1.71
CUL3-216ENST00000617432 REXO4Q9GZR2 422 aaKnown RBP4.39□□□□□ -1.71
CUL3-216ENST00000617432 RAB33BQ9H082 229 aa4.39□□□□□ -1.71
CUL3-216ENST00000617432 DDX47Q9H0S4 455 aaKnown RBP4.39□□□□□ -1.71
CUL3-216ENST00000617432 P2RY12Q9H244 342 aa4.39□□□□□ -1.71
CUL3-216ENST00000617432 SRMSQ9H3Y6 488 aa4.39□□□□□ -1.71
CUL3-216ENST00000617432 PLAC1Q9HBJ0 212 aa4.39□□□□□ -1.71
CUL3-216ENST00000617432 ZNF71Q9NQZ8 489 aaPredicted RBP4.39□□□□□ -1.71
CUL3-216ENST00000617432 FBXO6Q9NRD1 293 aaPredicted RBP4.39□□□□□ -1.71
CUL3-216ENST00000617432 FGF21Q9NSA1 209 aa4.39□□□□□ -1.71
CUL3-216ENST00000617432 STOX2Q9P2F5 926 aaPredicted RBP4.39□□□□□ -1.71
CUL3-216ENST00000617432 EPHA6Q9UF33 1036 aa4.39□□□□□ -1.71
CUL3-216ENST00000617432 FEZ2Q9UHY8 353 aaPredicted RBP4.39□□□□□ -1.71
CUL3-216ENST00000617432 PRSS50Q9UI38 385 aa4.39□□□□□ -1.71
CUL3-216ENST00000617432 ACSL5Q9ULC5 683 aa4.39□□□□□ -1.71
CUL3-216ENST00000617432 ASF1AQ9Y294 204 aa4.39□□□□□ -1.71
CUL3-216ENST00000617432 CRYL1Q9Y2S2 319 aa4.39□□□□□ -1.71
CUL3-216ENST00000617432 CFAP46Q8IYW2 2715 aa4.39□□□□□ -1.71
CUL3-216ENST00000617432 AHCTF1Q8WYP5 2266 aa4.39□□□□□ -1.71
CUL3-216ENST00000617432 KALRNO60229 2985 aa4.39□□□□□ -1.71
CUL3-216ENST00000617432 ZCWPW2A0A1B0GU75 182 aa4.38□□□□□ -1.71
CUL3-216ENST00000617432 C17orf113A0A1B0GUU1 675 aa4.38□□□□□ -1.71
CUL3-216ENST00000617432 GOLGA6L3A6NEY3 463 aa4.38□□□□□ -1.71
CUL3-216ENST00000617432 TMEM150CB9EJG8 249 aa4.38□□□□□ -1.71
CUL3-216ENST00000617432 PRR23D1E9PI22 279 aaPredicted RBP4.38□□□□□ -1.71
CUL3-216ENST00000617432 H3BMH7 237 aa4.38□□□□□ -1.71
CUL3-216ENST00000617432 CD3EAPO15446 510 aaKnown RBP4.38□□□□□ -1.71
CUL3-216ENST00000617432 PSMD3O43242 534 aa4.38□□□□□ -1.71
CUL3-216ENST00000617432 ZW10O43264 779 aa4.38□□□□□ -1.71
CUL3-216ENST00000617432 KIF5CO60282 957 aa4.38□□□□□ -1.71
CUL3-216ENST00000617432 KCNJ13O60928 360 aa4.38□□□□□ -1.71
CUL3-216ENST00000617432 PHF2O75151 1096 aa4.38□□□□□ -1.71
CUL3-216ENST00000617432 CNOT3O75175 753 aaKnown RBP4.38□□□□□ -1.71
CUL3-216ENST00000617432 ALOX12BO75342 701 aa4.38□□□□□ -1.71
CUL3-216ENST00000617432 GPC4O75487 556 aa4.38□□□□□ -1.71
CUL3-216ENST00000617432 SCRG1O75711 98 aa4.38□□□□□ -1.71
CUL3-216ENST00000617432 GASTP01350 101 aa4.38□□□□□ -1.71
CUL3-216ENST00000617432 STATHP02808 62 aa4.38□□□□□ -1.71
CUL3-216ENST00000617432 CAPN1P07384 714 aa4.38□□□□□ -1.71
CUL3-216ENST00000617432 CHRM5P08912 532 aaPredicted RBP4.38□□□□□ -1.71
CUL3-216ENST00000617432 PRR23D2P0DMB1 279 aaPredicted RBP4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms