RNA–Protein interactions for RNA: ENST00000617172.4

TARDBP-218, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 980 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-218ENST00000617172 BEST3Q8N1M1 668 aa9.09□□□□□ -0.95
TARDBP-218ENST00000617172 TMEM178AQ8NBL3 297 aa9.09□□□□□ -0.95
TARDBP-218ENST00000617172 ELP5Q8TE02 316 aa9.09□□□□□ -0.95
TARDBP-218ENST00000617172 ADAMTS18Q8TE60 1221 aa9.09□□□□□ -0.95
TARDBP-218ENST00000617172 CREB3L4Q8TEY5 395 aa9.09□□□□□ -0.95
TARDBP-218ENST00000617172 ANKRD49Q8WVL7 239 aa9.09□□□□□ -0.95
TARDBP-218ENST00000617172 GAL3ST3Q96A11 431 aa9.09□□□□□ -0.95
TARDBP-218ENST00000617172 GPR22Q99680 433 aa9.09□□□□□ -0.95
TARDBP-218ENST00000617172 NPLQ9BXD5 320 aaPredicted RBP9.09□□□□□ -0.95
TARDBP-218ENST00000617172 RAB17Q9H0T7 212 aa9.09□□□□□ -0.95
TARDBP-218ENST00000617172 SPNS1Q9H2V7 528 aa9.09□□□□□ -0.95
TARDBP-218ENST00000617172 SAYSD1Q9NPB0 183 aa9.09□□□□□ -0.95
TARDBP-218ENST00000617172 PRDM9Q9NQV7 894 aa9.09□□□□□ -0.95
TARDBP-218ENST00000617172 SEC14L3Q9UDX4 400 aa9.09□□□□□ -0.95
TARDBP-218ENST00000617172 IKZF3Q9UKT9 509 aa9.09□□□□□ -0.95
TARDBP-218ENST00000617172 PYCARDQ9ULZ3 195 aa9.09□□□□□ -0.95
TARDBP-218ENST00000617172 MTO1Q9Y2Z2 717 aaKnown RBP9.09□□□□□ -0.95
TARDBP-218ENST00000617172 DOCK10Q96BY6 2186 aa9.09□□□□□ -0.95
TARDBP-218ENST00000617172 NUP210LQ5VU65 1888 aa9.08□□□□□ -0.96
TARDBP-218ENST00000617172 MDC1Q14676 2089 aaKnown RBP9.08□□□□□ -0.96
TARDBP-218ENST00000617172 TCRBV9S1A1TA0A576 114 aa9.08□□□□□ -0.96
TARDBP-218ENST00000617172 LRIT2A6NDA9 550 aa9.08□□□□□ -0.96
TARDBP-218ENST00000617172 FAM159BA6NKW6 160 aa9.08□□□□□ -0.96
TARDBP-218ENST00000617172 CLGNO14967 610 aa9.08□□□□□ -0.96
TARDBP-218ENST00000617172 RAD51CO43502 376 aa9.08□□□□□ -0.96
TARDBP-218ENST00000617172 CLEC3AO75596 197 aa9.08□□□□□ -0.96
TARDBP-218ENST00000617172 STK16O75716 305 aa9.08□□□□□ -0.96
TARDBP-218ENST00000617172 WISP3O95389 354 aaPredicted RBP9.08□□□□□ -0.96
TARDBP-218ENST00000617172 CLDN1O95832 211 aa9.08□□□□□ -0.96
TARDBP-218ENST00000617172 EEF1DP29692 281 aaKnown RBP9.08□□□□□ -0.96
TARDBP-218ENST00000617172 CD96P40200 585 aa9.08□□□□□ -0.96
TARDBP-218ENST00000617172 HNF4AP41235 474 aa9.08□□□□□ -0.96
TARDBP-218ENST00000617172 GDF5P43026 501 aa9.08□□□□□ -0.96
TARDBP-218ENST00000617172 PLTPP55058 493 aa9.08□□□□□ -0.96
TARDBP-218ENST00000617172 CASP6P55212 293 aa9.08□□□□□ -0.96
TARDBP-218ENST00000617172 RAB8AP61006 207 aa9.08□□□□□ -0.96
TARDBP-218ENST00000617172 ETF1P62495 437 aaKnown RBP9.08□□□□□ -0.96
TARDBP-218ENST00000617172 OLR1P78380 273 aa9.08□□□□□ -0.96
TARDBP-218ENST00000617172 OC90Q02509 493 aaPredicted RBP9.08□□□□□ -0.96
TARDBP-218ENST00000617172 TGM3Q08188 693 aa9.08□□□□□ -0.96
TARDBP-218ENST00000617172 HYAL2Q12891 473 aa9.08□□□□□ -0.96
TARDBP-218ENST00000617172 LAPTM5Q13571 262 aa9.08□□□□□ -0.96
TARDBP-218ENST00000617172 TERF2Q15554 542 aa9.08□□□□□ -0.96
TARDBP-218ENST00000617172 OR1C1Q15619 314 aa9.08□□□□□ -0.96
TARDBP-218ENST00000617172 HIST2H2ACQ16777 129 aaPredicted RBP9.08□□□□□ -0.96
TARDBP-218ENST00000617172 PAGE2BQ5JRK9 111 aa9.08□□□□□ -0.96
TARDBP-218ENST00000617172 GRTP1Q5TC63 336 aa9.08□□□□□ -0.96
TARDBP-218ENST00000617172 HIST2H2AA3Q6FI13 130 aa9.08□□□□□ -0.96
TARDBP-218ENST00000617172 MTFR2Q6P444 385 aa9.08□□□□□ -0.96
TARDBP-218ENST00000617172 CAPN12Q6ZSI9 719 aa9.08□□□□□ -0.96
TARDBP-218ENST00000617172 CCDC91Q7Z6B0 441 aa9.08□□□□□ -0.96
TARDBP-218ENST00000617172 RPS19BP1Q86WX3 136 aaKnown RBP9.08□□□□□ -0.96
TARDBP-218ENST00000617172 CRLF3Q8IUI8 442 aa9.08□□□□□ -0.96
TARDBP-218ENST00000617172 CYP4X1Q8N118 509 aa9.08□□□□□ -0.96
TARDBP-218ENST00000617172 FAM98AQ8NCA5 519 aaKnown RBP9.08□□□□□ -0.96
TARDBP-218ENST00000617172 SRFBP1Q8NEF9 429 aaKnown RBP9.08□□□□□ -0.96
TARDBP-218ENST00000617172 C7orf57Q8NEG2 295 aa9.08□□□□□ -0.96
TARDBP-218ENST00000617172 STAG3L4Q8TBR4 150 aa9.08□□□□□ -0.96
TARDBP-218ENST00000617172 TSLPQ969D9 159 aa9.08□□□□□ -0.96
TARDBP-218ENST00000617172 PTCD3Q96EY7 689 aaKnown RBP9.08□□□□□ -0.96
TARDBP-218ENST00000617172 UBXN10Q96LJ8 280 aa9.08□□□□□ -0.96
TARDBP-218ENST00000617172 RBBP8Q99708 897 aa9.08□□□□□ -0.96
TARDBP-218ENST00000617172 RBCK1Q9BYM8 510 aa9.08□□□□□ -0.96
TARDBP-218ENST00000617172 DPH5Q9H2P9 285 aa9.08□□□□□ -0.96
TARDBP-218ENST00000617172 KLHL31Q9H511 634 aa9.08□□□□□ -0.96
TARDBP-218ENST00000617172 SMYD2Q9NRG4 433 aa9.08□□□□□ -0.96
TARDBP-218ENST00000617172 DNAJC11Q9NVH1 559 aa9.08□□□□□ -0.96
TARDBP-218ENST00000617172 WWOXQ9NZC7 414 aa9.08□□□□□ -0.96
TARDBP-218ENST00000617172 CD274Q9NZQ7 290 aa9.08□□□□□ -0.96
TARDBP-218ENST00000617172 MRPS33Q9Y291 106 aaKnown RBP9.08□□□□□ -0.96
TARDBP-218ENST00000617172 MMACHCQ9Y4U1 282 aa9.08□□□□□ -0.96
TARDBP-218ENST00000617172 ICE1Q9Y2F5 2266 aa9.08□□□□□ -0.96
TARDBP-218ENST00000617172 DOPEY1Q5JWR5 2465 aa9.07□□□□□ -0.96
TARDBP-218ENST00000617172 IGKV3D-11A0A0A0MRZ8 115 aa9.07□□□□□ -0.96
TARDBP-218ENST00000617172 TCRBV16S1A1N1A0A5B0 115 aa9.07□□□□□ -0.96
TARDBP-218ENST00000617172 CCDC189A1A4V9 331 aa9.07□□□□□ -0.96
TARDBP-218ENST00000617172 NCF1BA6NI72 391 aaPredicted RBP9.07□□□□□ -0.96
TARDBP-218ENST00000617172 SAGE2PA6NJ88 616 aa9.07□□□□□ -0.96
TARDBP-218ENST00000617172 GABRR3A8MPY1 467 aa9.07□□□□□ -0.96
TARDBP-218ENST00000617172 NCF1CA8MVU1 366 aaPredicted RBP9.07□□□□□ -0.96
TARDBP-218ENST00000617172 CXorf49A8MYA2 514 aaPredicted RBP9.07□□□□□ -0.96
TARDBP-218ENST00000617172 FANCGO15287 622 aa9.07□□□□□ -0.96
TARDBP-218ENST00000617172 TAPBPO15533 448 aa9.07□□□□□ -0.96
TARDBP-218ENST00000617172 PHGDHO43175 533 aaKnown RBP9.07□□□□□ -0.96
TARDBP-218ENST00000617172 B3GALT2O43825 422 aa9.07□□□□□ -0.96
TARDBP-218ENST00000617172 DNAJB6O75190 326 aa9.07□□□□□ -0.96
TARDBP-218ENST00000617172 UNC5CO95185 931 aa9.07□□□□□ -0.96
TARDBP-218ENST00000617172 S100BP04271 92 aaPredicted RBP9.07□□□□□ -0.96
TARDBP-218ENST00000617172 NCF1P14598 390 aaPredicted RBP9.07□□□□□ -0.96
TARDBP-218ENST00000617172 CD1DP15813 335 aa9.07□□□□□ -0.96
TARDBP-218ENST00000617172 CRABP2P29373 138 aa9.07□□□□□ -0.96
TARDBP-218ENST00000617172 STX2P32856 288 aa9.07□□□□□ -0.96
TARDBP-218ENST00000617172 CYB561P49447 251 aa9.07□□□□□ -0.96
TARDBP-218ENST00000617172 HSD17B7P56937 341 aa9.07□□□□□ -0.96
TARDBP-218ENST00000617172 RAB10P61026 200 aa9.07□□□□□ -0.96
TARDBP-218ENST00000617172 BTN3A2P78410 334 aa9.07□□□□□ -0.96
TARDBP-218ENST00000617172 BTG2P78543 158 aa9.07□□□□□ -0.96
TARDBP-218ENST00000617172 NAB1Q13506 487 aa9.07□□□□□ -0.96
TARDBP-218ENST00000617172 SLBPQ14493 270 aaKnown RBP eCLIP9.07□□□□□ -0.96
TARDBP-218ENST00000617172 EFTUD2Q15029 972 aaKnown RBP eCLIP9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms