RNA–Protein interactions for RNA: ENST00000612350.1

PTCHD3P1-201, Transcript of patched domain containing 3 pseudogene 1, humanhuman

BASIC

Gene PTCHD3P1, Length 537 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P1-201ENST00000612350 TGIF2Q9GZN2 237 aa6.72□□□□□ -1.33
PTCHD3P1-201ENST00000612350 TSPYL1Q9H0U9 437 aa6.72□□□□□ -1.33
PTCHD3P1-201ENST00000612350 ASB8Q9H765 288 aa6.72□□□□□ -1.33
PTCHD3P1-201ENST00000612350 L2HGDHQ9H9P8 463 aa6.72□□□□□ -1.33
PTCHD3P1-201ENST00000612350 TREX1Q9NSU2 369 aa6.72□□□□□ -1.33
PTCHD3P1-201ENST00000612350 ANAPC5Q9UJX4 755 aa6.72□□□□□ -1.33
PTCHD3P1-201ENST00000612350 SOX13Q9UN79 622 aa6.72□□□□□ -1.33
PTCHD3P1-201ENST00000612350 NPFFR2Q9Y5X5 522 aa6.72□□□□□ -1.33
PTCHD3P1-201ENST00000612350 CR1P17927 2039 aa6.72□□□□□ -1.33
PTCHD3P1-201ENST00000612350 TRBV5-4A0A0C4DH59 114 aa6.71□□□□□ -1.34
PTCHD3P1-201ENST00000612350 QSOX1O00391 747 aa6.71□□□□□ -1.34
PTCHD3P1-201ENST00000612350 IFRD1O00458 451 aaPredicted RBP6.71□□□□□ -1.34
PTCHD3P1-201ENST00000612350 CDK2AP1O14519 115 aa6.71□□□□□ -1.34
PTCHD3P1-201ENST00000612350 EIF3HO15372 352 aaKnown RBP eCLIP6.71□□□□□ -1.34
PTCHD3P1-201ENST00000612350 TLX2O43763 284 aaPredicted RBP6.71□□□□□ -1.34
PTCHD3P1-201ENST00000612350 SRPX2O60687 465 aaPredicted RBP6.71□□□□□ -1.34
PTCHD3P1-201ENST00000612350 SOX30O94993 753 aa6.71□□□□□ -1.34
PTCHD3P1-201ENST00000612350 GSTM1P09488 218 aa6.71□□□□□ -1.34
PTCHD3P1-201ENST00000612350 FBLP22087 321 aaKnown RBP6.71□□□□□ -1.34
PTCHD3P1-201ENST00000612350 MGAT1P26572 445 aa6.71□□□□□ -1.34
PTCHD3P1-201ENST00000612350 MC4RP32245 332 aa6.71□□□□□ -1.34
PTCHD3P1-201ENST00000612350 PRLHRP49683 370 aa6.71□□□□□ -1.34
PTCHD3P1-201ENST00000612350 ASCL1P50553 236 aa6.71□□□□□ -1.34
PTCHD3P1-201ENST00000612350 ITGA8P53708 1063 aa6.71□□□□□ -1.34
PTCHD3P1-201ENST00000612350 ARL4CP56559 192 aa6.71□□□□□ -1.34
PTCHD3P1-201ENST00000612350 VSX2P58304 361 aaPredicted RBP6.71□□□□□ -1.34
PTCHD3P1-201ENST00000612350 SRSF2Q01130 221 aaKnown RBP6.71□□□□□ -1.34
PTCHD3P1-201ENST00000612350 GSTM4Q03013 218 aa6.71□□□□□ -1.34
PTCHD3P1-201ENST00000612350 ITIH4Q14624 930 aa6.71□□□□□ -1.34
PTCHD3P1-201ENST00000612350 KIR2DS3Q14952 304 aa6.71□□□□□ -1.34
PTCHD3P1-201ENST00000612350 PDLIM3Q53GG5 364 aaPredicted RBP6.71□□□□□ -1.34
PTCHD3P1-201ENST00000612350 KIAA0930Q6ICG6 404 aaPredicted RBP6.71□□□□□ -1.34
PTCHD3P1-201ENST00000612350 ZNF585AQ6P3V2 769 aa6.71□□□□□ -1.34
PTCHD3P1-201ENST00000612350 BHLHB9Q6PI77 547 aa6.71□□□□□ -1.34
PTCHD3P1-201ENST00000612350 FIGLAQ6QHK4 219 aa6.71□□□□□ -1.34
PTCHD3P1-201ENST00000612350 CPEB2Q7Z5Q1 589 aaKnown RBP6.71□□□□□ -1.34
PTCHD3P1-201ENST00000612350 AMER3Q8N944 861 aa6.71□□□□□ -1.34
PTCHD3P1-201ENST00000612350 ZFP62Q8NB50 900 aaPredicted RBP6.71□□□□□ -1.34
PTCHD3P1-201ENST00000612350 OR5AR1Q8NGP9 310 aa6.71□□□□□ -1.34
PTCHD3P1-201ENST00000612350 OR13C4Q8NGS5 318 aa6.71□□□□□ -1.34
PTCHD3P1-201ENST00000612350 OR13J1Q8NGT2 312 aa6.71□□□□□ -1.34
PTCHD3P1-201ENST00000612350 OR4L1Q8NH43 312 aa6.71□□□□□ -1.34
PTCHD3P1-201ENST00000612350 CALML6Q8TD86 181 aa6.71□□□□□ -1.34
PTCHD3P1-201ENST00000612350 ROBO4Q8WZ75 1007 aa6.71□□□□□ -1.34
PTCHD3P1-201ENST00000612350 C10orf90Q96M02 699 aa6.71□□□□□ -1.34
PTCHD3P1-201ENST00000612350 ZFYVE21Q9BQ24 234 aa6.71□□□□□ -1.34
PTCHD3P1-201ENST00000612350 PLCD4Q9BRC7 762 aa6.71□□□□□ -1.34
PTCHD3P1-201ENST00000612350 SGPP1Q9BX95 441 aa6.71□□□□□ -1.34
PTCHD3P1-201ENST00000612350 GSX2Q9BZM3 304 aa6.71□□□□□ -1.34
PTCHD3P1-201ENST00000612350 DEFB127Q9H1M4 99 aa6.71□□□□□ -1.34
PTCHD3P1-201ENST00000612350 CHRAC1Q9NRG0 131 aa6.71□□□□□ -1.34
PTCHD3P1-201ENST00000612350 FAM114A2Q9NRY5 505 aa6.71□□□□□ -1.34
PTCHD3P1-201ENST00000612350 C14orf105Q9NVL8 296 aa6.71□□□□□ -1.34
PTCHD3P1-201ENST00000612350 PIH1D1Q9NWS0 290 aaKnown RBP6.71□□□□□ -1.34
PTCHD3P1-201ENST00000612350 TRPC4Q9UBN4 977 aa6.71□□□□□ -1.34
PTCHD3P1-201ENST00000612350 B4GALT7Q9UBV7 327 aa6.71□□□□□ -1.34
PTCHD3P1-201ENST00000612350 CRLS1Q9UJA2 301 aa6.71□□□□□ -1.34
PTCHD3P1-201ENST00000612350 FOXD3Q9UJU5 478 aaPredicted RBP6.71□□□□□ -1.34
PTCHD3P1-201ENST00000612350 ZNF281Q9Y2X9 895 aa6.71□□□□□ -1.34
PTCHD3P1-201ENST00000612350 SNX24Q9Y343 169 aa6.71□□□□□ -1.34
PTCHD3P1-201ENST00000612350 TGP01266 2768 aa6.71□□□□□ -1.34
PTCHD3P1-201ENST00000612350 IGLV3-16A0A075B6K0 115 aa6.7□□□□□ -1.34
PTCHD3P1-201ENST00000612350 LOC105369274A0A096LPK9 316 aa6.7□□□□□ -1.34
PTCHD3P1-201ENST00000612350 A0A0G2JK05 382 aa6.7□□□□□ -1.34
PTCHD3P1-201ENST00000612350 LOC102723532A0A0G2JNH3 316 aa6.7□□□□□ -1.34
PTCHD3P1-201ENST00000612350 SERINC4A6NH21 518 aa6.7□□□□□ -1.34
PTCHD3P1-201ENST00000612350 E7ESA3 106 aa6.7□□□□□ -1.34
PTCHD3P1-201ENST00000612350 KLRC4-KLRK1H3BQV0 150 aa6.7□□□□□ -1.34
PTCHD3P1-201ENST00000612350 GOLGA8MH3BSY2 632 aa6.7□□□□□ -1.34
PTCHD3P1-201ENST00000612350 TP73O15350 636 aa6.7□□□□□ -1.34
PTCHD3P1-201ENST00000612350 BUD23O43709 281 aaKnown RBP6.7□□□□□ -1.34
PTCHD3P1-201ENST00000612350 PEX1O43933 1283 aa6.7□□□□□ -1.34
PTCHD3P1-201ENST00000612350 CTSVO60911 334 aa6.7□□□□□ -1.34
PTCHD3P1-201ENST00000612350 AVILO75366 819 aa6.7□□□□□ -1.34
PTCHD3P1-201ENST00000612350 AP2A2O94973 939 aa6.7□□□□□ -1.34
PTCHD3P1-201ENST00000612350 STATHP02808 62 aa6.7□□□□□ -1.34
PTCHD3P1-201ENST00000612350 C8orf89P0DMQ9 161 aa6.7□□□□□ -1.34
PTCHD3P1-201ENST00000612350 PGAM1P18669 254 aa6.7□□□□□ -1.34
PTCHD3P1-201ENST00000612350 ACRV1P26436 265 aa6.7□□□□□ -1.34
PTCHD3P1-201ENST00000612350 ACADLP28330 430 aa6.7□□□□□ -1.34
PTCHD3P1-201ENST00000612350 AKT1P31749 480 aa6.7□□□□□ -1.34
PTCHD3P1-201ENST00000612350 SLC26A3P40879 764 aa6.7□□□□□ -1.34
PTCHD3P1-201ENST00000612350 RPL21P46778 160 aaKnown RBP6.7□□□□□ -1.34
PTCHD3P1-201ENST00000612350 CYB561P49447 251 aa6.7□□□□□ -1.34
PTCHD3P1-201ENST00000612350 TTPAP49638 278 aa6.7□□□□□ -1.34
PTCHD3P1-201ENST00000612350 ILF2Q12905 390 aaKnown RBP6.7□□□□□ -1.34
PTCHD3P1-201ENST00000612350 TNK1Q13470 666 aa6.7□□□□□ -1.34
PTCHD3P1-201ENST00000612350 FRG1Q14331 258 aaKnown RBP6.7□□□□□ -1.34
PTCHD3P1-201ENST00000612350 ANKRD20A4Q4UJ75 823 aa6.7□□□□□ -1.34
PTCHD3P1-201ENST00000612350 CCDC38Q502W7 563 aa6.7□□□□□ -1.34
PTCHD3P1-201ENST00000612350 FASTKD1Q53R41 847 aaKnown RBP6.7□□□□□ -1.34
PTCHD3P1-201ENST00000612350 RNF187Q5TA31 235 aaPredicted RBP6.7□□□□□ -1.34
PTCHD3P1-201ENST00000612350 RIPPLY2Q5TAB7 128 aa6.7□□□□□ -1.34
PTCHD3P1-201ENST00000612350 HIST2H2BDQ6DRA6 164 aa6.7□□□□□ -1.34
PTCHD3P1-201ENST00000612350 FRMPD2BQ6IN97 320 aa6.7□□□□□ -1.34
PTCHD3P1-201ENST00000612350 MRNIPQ6NTE8 343 aa6.7□□□□□ -1.34
PTCHD3P1-201ENST00000612350 CASC4Q6P4E1 433 aa6.7□□□□□ -1.34
PTCHD3P1-201ENST00000612350 ZNF449Q6P9G9 518 aa6.7□□□□□ -1.34
PTCHD3P1-201ENST00000612350 POMZP3Q6PJE2 187 aa6.7□□□□□ -1.34
PTCHD3P1-201ENST00000612350 PACS1Q6VY07 963 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms