RNA–Protein interactions for RNA: ENST00000611481.1

LINC00540-201, long intergenic non-protein coding RNA 540, humanhuman

TSL 4

Gene LINC00540, Length 588 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00540-201ENST00000611481 A8MXE2 369 aa4.16□□□□□ -1.74
LINC00540-201ENST00000611481 ANKRD63C9JTQ0 380 aa4.16□□□□□ -1.74
LINC00540-201ENST00000611481 AP4M1O00189 453 aa4.16□□□□□ -1.74
LINC00540-201ENST00000611481 RNF103O00237 685 aa4.16□□□□□ -1.74
LINC00540-201ENST00000611481 MCF2LO15068 1137 aa4.16□□□□□ -1.74
LINC00540-201ENST00000611481 ALOX15BO15296 676 aa4.16□□□□□ -1.74
LINC00540-201ENST00000611481 CTAG2O75638 210 aa4.16□□□□□ -1.74
LINC00540-201ENST00000611481 PIGRP01833 764 aa4.16□□□□□ -1.74
LINC00540-201ENST00000611481 RAF1P04049 648 aa4.16□□□□□ -1.74
LINC00540-201ENST00000611481 TPM2P07951 284 aa4.16□□□□□ -1.74
LINC00540-201ENST00000611481 TRIM49P0CI25 452 aa4.16□□□□□ -1.74
LINC00540-201ENST00000611481 TRIM49CP0CI26 452 aa4.16□□□□□ -1.74
LINC00540-201ENST00000611481 IGFBP2P18065 325 aa4.16□□□□□ -1.74
LINC00540-201ENST00000611481 BSGP35613 385 aa4.16□□□□□ -1.74
LINC00540-201ENST00000611481 GGT5P36269 586 aa4.16□□□□□ -1.74
LINC00540-201ENST00000611481 CCT6AP40227 531 aaKnown RBP4.16□□□□□ -1.74
LINC00540-201ENST00000611481 SRP54P61011 504 aaKnown RBP4.16□□□□□ -1.74
LINC00540-201ENST00000611481 YPEL5P62699 121 aa4.16□□□□□ -1.74
LINC00540-201ENST00000611481 RPS15P62841 145 aaKnown RBP4.16□□□□□ -1.74
LINC00540-201ENST00000611481 DMPKQ09013 629 aa4.16□□□□□ -1.74
LINC00540-201ENST00000611481 AP1B1Q10567 949 aa4.16□□□□□ -1.74
LINC00540-201ENST00000611481 AIMP2Q13155 320 aaKnown RBP4.16□□□□□ -1.74
LINC00540-201ENST00000611481 KEAP1Q14145 624 aa4.16□□□□□ -1.74
LINC00540-201ENST00000611481 C3AR1Q16581 482 aa4.16□□□□□ -1.74
LINC00540-201ENST00000611481 C20orf194Q5TEA3 1177 aa4.16□□□□□ -1.74
LINC00540-201ENST00000611481 SHEQ5VZ18 495 aa4.16□□□□□ -1.74
LINC00540-201ENST00000611481 KCTD16Q68DU8 428 aa4.16□□□□□ -1.74
LINC00540-201ENST00000611481 ANKRD40Q6AI12 368 aa4.16□□□□□ -1.74
LINC00540-201ENST00000611481 GALNT17Q6IS24 598 aa4.16□□□□□ -1.74
LINC00540-201ENST00000611481 FAM199XQ6PEV8 388 aaPredicted RBP4.16□□□□□ -1.74
LINC00540-201ENST00000611481 IYDQ6PHW0 289 aa4.16□□□□□ -1.74
LINC00540-201ENST00000611481 PAMR1Q6UXH9 720 aa4.16□□□□□ -1.74
LINC00540-201ENST00000611481 COLCA1Q6ZS62 124 aa4.16□□□□□ -1.74
LINC00540-201ENST00000611481 C18orf65Q6ZTR6 163 aa4.16□□□□□ -1.74
LINC00540-201ENST00000611481 BTN2A1Q7KYR7 527 aa4.16□□□□□ -1.74
LINC00540-201ENST00000611481 ARHGAP22Q7Z5H3 698 aa4.16□□□□□ -1.74
LINC00540-201ENST00000611481 CAND1Q86VP6 1230 aaKnown RBP4.16□□□□□ -1.74
LINC00540-201ENST00000611481 ANKRD13BQ86YJ7 626 aa4.16□□□□□ -1.74
LINC00540-201ENST00000611481 WDR49Q8IV35 697 aa4.16□□□□□ -1.74
LINC00540-201ENST00000611481 CCDC170Q8IYT3 715 aa4.16□□□□□ -1.74
LINC00540-201ENST00000611481 CCAR2Q8N163 923 aaKnown RBP4.16□□□□□ -1.74
LINC00540-201ENST00000611481 SIRT6Q8N6T7 355 aa4.16□□□□□ -1.74
LINC00540-201ENST00000611481 POMGNT2Q8NAT1 580 aa4.16□□□□□ -1.74
LINC00540-201ENST00000611481 DENND6BQ8NEG7 585 aa4.16□□□□□ -1.74
LINC00540-201ENST00000611481 DNAJB14Q8TBM8 379 aa4.16□□□□□ -1.74
LINC00540-201ENST00000611481 CA5BP1Q8WTZ4 195 aa4.16□□□□□ -1.74
LINC00540-201ENST00000611481 KTI12Q96EK9 354 aaPredicted RBP4.16□□□□□ -1.74
LINC00540-201ENST00000611481 PDXPQ96GD0 296 aa4.16□□□□□ -1.74
LINC00540-201ENST00000611481 CNDP1Q96KN2 507 aa4.16□□□□□ -1.74
LINC00540-201ENST00000611481 WDR77Q9BQA1 342 aaPredicted RBP4.16□□□□□ -1.74
LINC00540-201ENST00000611481 MAK16Q9BXY0 300 aaKnown RBP4.16□□□□□ -1.74
LINC00540-201ENST00000611481 MTMR12Q9C0I1 747 aa4.16□□□□□ -1.74
LINC00540-201ENST00000611481 FAM234AQ9H0X4 552 aa4.16□□□□□ -1.74
LINC00540-201ENST00000611481 NDST4Q9H3R1 872 aa4.16□□□□□ -1.74
LINC00540-201ENST00000611481 AKIRIN1Q9H9L7 192 aaPredicted RBP4.16□□□□□ -1.74
LINC00540-201ENST00000611481 TMEM184CQ9NVA4 438 aa4.16□□□□□ -1.74
LINC00540-201ENST00000611481 STMN3Q9NZ72 180 aa4.16□□□□□ -1.74
LINC00540-201ENST00000611481 XPR1Q9UBH6 696 aa4.16□□□□□ -1.74
LINC00540-201ENST00000611481 KLQ9UEF7 1012 aa4.16□□□□□ -1.74
LINC00540-201ENST00000611481 TINAGQ9UJW2 476 aa4.16□□□□□ -1.74
LINC00540-201ENST00000611481 AGO2Q9UKV8 859 aaKnown RBP4.16□□□□□ -1.74
LINC00540-201ENST00000611481 FAM169AQ9Y6X4 670 aa4.16□□□□□ -1.74
LINC00540-201ENST00000611481 PIKFYVEQ9Y2I7 2098 aa4.16□□□□□ -1.74
LINC00540-201ENST00000611481 GTF3C1Q12789 2109 aa4.16□□□□□ -1.74
LINC00540-201ENST00000611481 ZANQ9Y493 2812 aa4.16□□□□□ -1.74
LINC00540-201ENST00000611481 PRKDCP78527 4128 aaKnown RBP4.15□□□□□ -1.74
LINC00540-201ENST00000611481 NPIPB15A6NHN6 443 aaPredicted RBP4.15□□□□□ -1.75
LINC00540-201ENST00000611481 E9PMD0 336 aa4.15□□□□□ -1.75
LINC00540-201ENST00000611481 J3KTA2 159 aa4.15□□□□□ -1.75
LINC00540-201ENST00000611481 NEMFO60524 1076 aa4.15□□□□□ -1.75
LINC00540-201ENST00000611481 SRGAP2O75044 1071 aa4.15□□□□□ -1.75
LINC00540-201ENST00000611481 CNOT3O75175 753 aaKnown RBP4.15□□□□□ -1.75
LINC00540-201ENST00000611481 METTL18O95568 372 aa4.15□□□□□ -1.75
LINC00540-201ENST00000611481 TNFP01375 233 aa4.15□□□□□ -1.75
LINC00540-201ENST00000611481 SPARCP09486 303 aa4.15□□□□□ -1.75
LINC00540-201ENST00000611481 P4HA1P13674 534 aa4.15□□□□□ -1.75
LINC00540-201ENST00000611481 CCDC130P13994 396 aa4.15□□□□□ -1.75
LINC00540-201ENST00000611481 HLA-DPA1P20036 260 aa4.15□□□□□ -1.75
LINC00540-201ENST00000611481 GCH1P30793 250 aa4.15□□□□□ -1.75
LINC00540-201ENST00000611481 CHRNA3P32297 505 aa4.15□□□□□ -1.75
LINC00540-201ENST00000611481 ARL1P40616 181 aaPredicted RBP4.15□□□□□ -1.75
LINC00540-201ENST00000611481 GPD2P43304 727 aa4.15□□□□□ -1.75
LINC00540-201ENST00000611481 PPP5CP53041 499 aa4.15□□□□□ -1.75
LINC00540-201ENST00000611481 TPD52P55327 224 aaPredicted RBP4.15□□□□□ -1.75
LINC00540-201ENST00000611481 EVCP57679 992 aa4.15□□□□□ -1.75
LINC00540-201ENST00000611481 RPS24P62847 133 aaKnown RBP4.15□□□□□ -1.75
LINC00540-201ENST00000611481 CRYMQ14894 314 aa4.15□□□□□ -1.75
LINC00540-201ENST00000611481 NR1D2Q14995 579 aa4.15□□□□□ -1.75
LINC00540-201ENST00000611481 DLG2Q15700 870 aa4.15□□□□□ -1.75
LINC00540-201ENST00000611481 GALNTL6Q49A17 601 aa4.15□□□□□ -1.75
LINC00540-201ENST00000611481 Q5PR19 223 aa4.15□□□□□ -1.75
LINC00540-201ENST00000611481 MPP7Q5T2T1 576 aa4.15□□□□□ -1.75
LINC00540-201ENST00000611481 DGAT2L7PQ6IED9 249 aa4.15□□□□□ -1.75
LINC00540-201ENST00000611481 FAM83HQ6ZRV2 1179 aaPredicted RBP4.15□□□□□ -1.75
LINC00540-201ENST00000611481 C1orf186Q6ZWK4 172 aa4.15□□□□□ -1.75
LINC00540-201ENST00000611481 GAS2L3Q86XJ1 694 aa4.15□□□□□ -1.75
LINC00540-201ENST00000611481 SCML4Q8N228 414 aa4.15□□□□□ -1.75
LINC00540-201ENST00000611481 SPC24Q8NBT2 197 aa4.15□□□□□ -1.75
LINC00540-201ENST00000611481 HJURPQ8NCD3 748 aaPredicted RBP4.15□□□□□ -1.75
LINC00540-201ENST00000611481 MCUQ8NE86 351 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms