RNA–Protein interactions for RNA: ENST00000610828.4

NEK3-205, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK3, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-205ENST00000610828 TSC22D4Q9Y3Q8 395 aa13.04□□□□□ -0.32
NEK3-205ENST00000610828 PCDHGA8Q9Y5G5 932 aa13.04□□□□□ -0.32
NEK3-205ENST00000610828 A0A1W2PQU0 124 aa13.03□□□□□ -0.32
NEK3-205ENST00000610828 PLPP1O14494 284 aa13.03□□□□□ -0.32
NEK3-205ENST00000610828 GPR37L1O60883 481 aa13.03□□□□□ -0.32
NEK3-205ENST00000610828 TBX6O95947 436 aaPredicted RBP13.03□□□□□ -0.32
NEK3-205ENST00000610828 SEMG1P04279 462 aa13.03□□□□□ -0.32
NEK3-205ENST00000610828 ETFAP13804 333 aa13.03□□□□□ -0.32
NEK3-205ENST00000610828 TPP2P29144 1249 aaPredicted RBP13.03□□□□□ -0.32
NEK3-205ENST00000610828 CCR8P51685 355 aa13.03□□□□□ -0.32
NEK3-205ENST00000610828 KHDRBS2Q5VWX1 349 aaKnown RBP13.03□□□□□ -0.32
NEK3-205ENST00000610828 CEP68Q76N32 757 aa13.03□□□□□ -0.32
NEK3-205ENST00000610828 DCP2Q8IU60 420 aaKnown RBP13.03□□□□□ -0.32
NEK3-205ENST00000610828 ADAMTS16Q8TE57 1224 aa13.03□□□□□ -0.32
NEK3-205ENST00000610828 F2RL3Q96RI0 385 aa13.03□□□□□ -0.32
NEK3-205ENST00000610828 INSM2Q96T92 566 aaPredicted RBP13.03□□□□□ -0.32
NEK3-205ENST00000610828 BARD1Q99728 777 aaKnown RBP13.03□□□□□ -0.32
NEK3-205ENST00000610828 MYOCQ99972 504 aa13.03□□□□□ -0.32
NEK3-205ENST00000610828 PCBD2Q9H0N5 130 aa13.03□□□□□ -0.32
NEK3-205ENST00000610828 PELI2Q9HAT8 420 aa13.03□□□□□ -0.32
NEK3-205ENST00000610828 FZD3Q9NPG1 666 aa13.03□□□□□ -0.32
NEK3-205ENST00000610828 TMEFF2Q9UIK5 374 aaPredicted RBP13.03□□□□□ -0.32
NEK3-205ENST00000610828 GMEB1Q9Y692 573 aa13.03□□□□□ -0.32
NEK3-205ENST00000610828 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.03□□□□□ -0.32
NEK3-205ENST00000610828 LOC100130705A0A1B0GUX0 176 aa13.03□□□□□ -0.32
NEK3-205ENST00000610828 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.03□□□□□ -0.32
NEK3-205ENST00000610828 SUV39H1O43463 412 aa13.03□□□□□ -0.32
NEK3-205ENST00000610828 DNTTP04053 509 aa13.03□□□□□ -0.32
NEK3-205ENST00000610828 IGFBP5P24593 272 aa13.03□□□□□ -0.32
NEK3-205ENST00000610828 CHI3L1P36222 383 aaPredicted RBP13.03□□□□□ -0.32
NEK3-205ENST00000610828 TNFRSF4P43489 277 aa13.03□□□□□ -0.32
NEK3-205ENST00000610828 MVDP53602 400 aa13.03□□□□□ -0.32
NEK3-205ENST00000610828 RAD23AP54725 363 aa13.03□□□□□ -0.32
NEK3-205ENST00000610828 SH3BGRP55822 239 aaPredicted RBP13.03□□□□□ -0.32
NEK3-205ENST00000610828 IL1RL1Q01638 556 aa13.03□□□□□ -0.32
NEK3-205ENST00000610828 TEAD4Q15561 434 aa13.03□□□□□ -0.32
NEK3-205ENST00000610828 MLF2Q15773 248 aaPredicted RBP13.03□□□□□ -0.32
NEK3-205ENST00000610828 PRSS53Q2L4Q9 553 aa13.03□□□□□ -0.32
NEK3-205ENST00000610828 ADCK2Q7Z695 626 aa13.03□□□□□ -0.32
NEK3-205ENST00000610828 GALNT5Q7Z7M9 940 aa13.03□□□□□ -0.32
NEK3-205ENST00000610828 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.03□□□□□ -0.32
NEK3-205ENST00000610828 RAB42Q8N4Z0 105 aa13.03□□□□□ -0.32
NEK3-205ENST00000610828 LINC01555Q8NAE3 123 aa13.03□□□□□ -0.32
NEK3-205ENST00000610828 MTERF3Q96E29 417 aa13.03□□□□□ -0.32
NEK3-205ENST00000610828 NPLQ9BXD5 320 aaPredicted RBP13.03□□□□□ -0.32
NEK3-205ENST00000610828 SLC17A9Q9BYT1 436 aa13.03□□□□□ -0.32
NEK3-205ENST00000610828 SLC6A16Q9GZN6 736 aa13.03□□□□□ -0.32
NEK3-205ENST00000610828 RHBGQ9H310 441 aa13.03□□□□□ -0.32
NEK3-205ENST00000610828 ADPRHL2Q9NX46 363 aa13.03□□□□□ -0.32
NEK3-205ENST00000610828 TAS2R9Q9NYW1 312 aa13.03□□□□□ -0.32
NEK3-205ENST00000610828 SPATA7Q9P0W8 599 aa13.03□□□□□ -0.32
NEK3-205ENST00000610828 A0A1W2PPV9 198 aa13.02□□□□□ -0.32
NEK3-205ENST00000610828 A0A1W2PRB8 838 aa13.02□□□□□ -0.32
NEK3-205ENST00000610828 KLHL33A6NCF5 533 aa13.02□□□□□ -0.32
NEK3-205ENST00000610828 IL7RP16871 459 aa13.02□□□□□ -0.32
NEK3-205ENST00000610828 SLC5A2P31639 672 aa13.02□□□□□ -0.32
NEK3-205ENST00000610828 PCGF2P35227 344 aa13.02□□□□□ -0.32
NEK3-205ENST00000610828 SOAT1P35610 550 aa13.02□□□□□ -0.32
NEK3-205ENST00000610828 POLR2IP36954 125 aaKnown RBP13.02□□□□□ -0.32
NEK3-205ENST00000610828 HLCSP50747 726 aa13.02□□□□□ -0.32
NEK3-205ENST00000610828 CRYBA2P53672 197 aa13.02□□□□□ -0.32
NEK3-205ENST00000610828 DLX2Q07687 328 aaPredicted RBP13.02□□□□□ -0.32
NEK3-205ENST00000610828 TMEM196Q5HYL7 178 aa13.02□□□□□ -0.32
NEK3-205ENST00000610828 DEPDC1Q5TB30 811 aa13.02□□□□□ -0.32
NEK3-205ENST00000610828 IKBIPQ70UQ0 350 aa13.02□□□□□ -0.32
NEK3-205ENST00000610828 ABHD11Q8NFV4 315 aa13.02□□□□□ -0.32
NEK3-205ENST00000610828 TBC1D20Q96BZ9 403 aa13.02□□□□□ -0.32
NEK3-205ENST00000610828 C1QTNF2Q9BXJ5 285 aa13.02□□□□□ -0.32
NEK3-205ENST00000610828 TMEM121BQ9BXQ6 578 aaPredicted RBP13.02□□□□□ -0.32
NEK3-205ENST00000610828 MS4A8Q9BY19 250 aa13.02□□□□□ -0.32
NEK3-205ENST00000610828 XKR8Q9H6D3 395 aa13.02□□□□□ -0.32
NEK3-205ENST00000610828 WASH6PQ9NQA3 447 aa13.02□□□□□ -0.32
NEK3-205ENST00000610828 DDX18Q9NVP1 670 aaKnown RBP13.02□□□□□ -0.32
NEK3-205ENST00000610828 SAMHD1Q9Y3Z3 626 aaKnown RBP13.02□□□□□ -0.32
NEK3-205ENST00000610828 PLEKHM1Q9Y4G2 1056 aa13.02□□□□□ -0.32
NEK3-205ENST00000610828 MAP4K5Q9Y4K4 846 aa13.02□□□□□ -0.32
NEK3-205ENST00000610828 TBC1D3DA0A087WVF3 549 aa13.02□□□□□ -0.33
NEK3-205ENST00000610828 TBC1D3IA0A087WXS9 549 aa13.02□□□□□ -0.33
NEK3-205ENST00000610828 TBC1D3EA0A087X179 549 aa13.02□□□□□ -0.33
NEK3-205ENST00000610828 TBC1D3KA0A087X1G2 549 aa13.02□□□□□ -0.33
NEK3-205ENST00000610828 TBC1D3FA6NER0 549 aaPredicted RBP13.02□□□□□ -0.33
NEK3-205ENST00000610828 TBC1D3LB9A6J9 549 aa13.02□□□□□ -0.33
NEK3-205ENST00000610828 SCAMP1O15126 338 aa13.02□□□□□ -0.33
NEK3-205ENST00000610828 PLRG1O43660 514 aaKnown RBP13.02□□□□□ -0.33
NEK3-205ENST00000610828 OR1F1O43749 312 aa13.02□□□□□ -0.33
NEK3-205ENST00000610828 MITFO75030 526 aaPredicted RBP13.02□□□□□ -0.33
NEK3-205ENST00000610828 CEACAM5P06731 702 aa13.02□□□□□ -0.33
NEK3-205ENST00000610828 TBC1D3HP0C7X1 549 aa13.02□□□□□ -0.33
NEK3-205ENST00000610828 TEAD1P28347 426 aa13.02□□□□□ -0.33
NEK3-205ENST00000610828 PCSK6P29122 969 aa13.02□□□□□ -0.33
NEK3-205ENST00000610828 NTSR1P30989 418 aa13.02□□□□□ -0.33
NEK3-205ENST00000610828 DNAJA1P31689 397 aaKnown RBP13.02□□□□□ -0.33
NEK3-205ENST00000610828 PRIM2P49643 509 aa13.02□□□□□ -0.33
NEK3-205ENST00000610828 CDK9P50750 372 aaKnown RBP13.02□□□□□ -0.33
NEK3-205ENST00000610828 MAPK12P53778 367 aa13.02□□□□□ -0.33
NEK3-205ENST00000610828 DMPKQ09013 629 aa13.02□□□□□ -0.33
NEK3-205ENST00000610828 KRT33BQ14525 404 aa13.02□□□□□ -0.33
NEK3-205ENST00000610828 MEP1AQ16819 746 aa13.02□□□□□ -0.33
NEK3-205ENST00000610828 SLC5A12Q1EHB4 618 aa13.02□□□□□ -0.33
NEK3-205ENST00000610828 RFX4Q33E94 735 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms