RNA–Protein interactions for RNA: ENST00000606248.5

MED16-210, Transcript of mediator complex subunit 16, humanhuman

TSL 1 (best)

Gene MED16, Length 3,181 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED16-210ENST00000606248 UBE2UQ5VVX9 321 aa13.39□□□□□ -0.27
MED16-210ENST00000606248 C11orf65Q8NCR3 313 aa13.39□□□□□ -0.27
MED16-210ENST00000606248 WDR36Q8NI36 951 aaKnown RBP13.39□□□□□ -0.27
MED16-210ENST00000606248 STARD8Q92502 1023 aa13.39□□□□□ -0.27
MED16-210ENST00000606248 NEDD4LQ96PU5 975 aa13.39□□□□□ -0.27
MED16-210ENST00000606248 FAM129BQ96TA1 746 aa13.39□□□□□ -0.27
MED16-210ENST00000606248 PSD2Q9BQI7 771 aa13.39□□□□□ -0.27
MED16-210ENST00000606248 SPNS1Q9H2V7 528 aa13.39□□□□□ -0.27
MED16-210ENST00000606248 IFT52Q9Y366 437 aa13.39□□□□□ -0.27
MED16-210ENST00000606248 PRKAB1Q9Y478 270 aa13.39□□□□□ -0.27
MED16-210ENST00000606248 CLDN24A6NM45 220 aa13.39□□□□□ -0.27
MED16-210ENST00000606248 RPLP0P05388 317 aaKnown RBP13.39□□□□□ -0.27
MED16-210ENST00000606248 C8GP07360 202 aa13.39□□□□□ -0.27
MED16-210ENST00000606248 GRK3P35626 688 aa13.39□□□□□ -0.27
MED16-210ENST00000606248 CHI3L1P36222 383 aaPredicted RBP13.39□□□□□ -0.27
MED16-210ENST00000606248 RGS6P49758 472 aa13.39□□□□□ -0.27
MED16-210ENST00000606248 SNRPD1P62314 119 aaKnown RBP13.39□□□□□ -0.27
MED16-210ENST00000606248 SELENOWP63302 87 aa13.39□□□□□ -0.27
MED16-210ENST00000606248 PTGES3Q15185 160 aaKnown RBP13.39□□□□□ -0.27
MED16-210ENST00000606248 DUSP7Q16829 419 aa13.39□□□□□ -0.27
MED16-210ENST00000606248 SLC5A12Q1EHB4 618 aa13.39□□□□□ -0.27
MED16-210ENST00000606248 LRIT3Q3SXY7 679 aa13.39□□□□□ -0.27
MED16-210ENST00000606248 PAQR6Q6TCH4 344 aa13.39□□□□□ -0.27
MED16-210ENST00000606248 SLC46A3Q7Z3Q1 461 aa13.39□□□□□ -0.27
MED16-210ENST00000606248 SZRD1Q7Z422 152 aa13.39□□□□□ -0.27
MED16-210ENST00000606248 AQP11Q8NBQ7 271 aa13.39□□□□□ -0.27
MED16-210ENST00000606248 SIGLEC11Q96RL6 698 aa13.39□□□□□ -0.27
MED16-210ENST00000606248 LINC00597Q9H2U6 94 aa13.39□□□□□ -0.27
MED16-210ENST00000606248 DNAJC27Q9NZQ0 273 aa13.39□□□□□ -0.27
MED16-210ENST00000606248 STOX2Q9P2F5 926 aaPredicted RBP13.39□□□□□ -0.27
MED16-210ENST00000606248 PLAGL1Q9UM63 463 aa13.39□□□□□ -0.27
MED16-210ENST00000606248 AP3M1Q9Y2T2 418 aa13.39□□□□□ -0.27
MED16-210ENST00000606248 CFAP20Q9Y6A4 193 aaKnown RBP13.39□□□□□ -0.27
MED16-210ENST00000606248 SZT2Q5T011 3432 aa13.39□□□□□ -0.27
MED16-210ENST00000606248 C1orf226A1L170 272 aa13.38□□□□□ -0.27
MED16-210ENST00000606248 RTCAO00442 366 aaKnown RBP13.38□□□□□ -0.27
MED16-210ENST00000606248 IL1RNP18510 177 aa13.38□□□□□ -0.27
MED16-210ENST00000606248 SCARB2Q14108 478 aa13.38□□□□□ -0.27
MED16-210ENST00000606248 C10orf62Q5T681 223 aaPredicted RBP13.38□□□□□ -0.27
MED16-210ENST00000606248 LYPLAL1Q5VWZ2 237 aa13.38□□□□□ -0.27
MED16-210ENST00000606248 NXNL2Q5VZ03 156 aa13.38□□□□□ -0.27
MED16-210ENST00000606248 TNFAIP8L2Q6P589 184 aaPredicted RBP13.38□□□□□ -0.27
MED16-210ENST00000606248 C22orf39Q6P5X5 142 aa13.38□□□□□ -0.27
MED16-210ENST00000606248 RAB8BQ92930 207 aa13.38□□□□□ -0.27
MED16-210ENST00000606248 TMEM203Q969S6 136 aa13.38□□□□□ -0.27
MED16-210ENST00000606248 EHD3Q9NZN3 535 aa13.38□□□□□ -0.27
MED16-210ENST00000606248 RUVBL1Q9Y265 456 aaKnown RBP13.38□□□□□ -0.27
MED16-210ENST00000606248 PCDHGA2Q9Y5H1 932 aa13.38□□□□□ -0.27
MED16-210ENST00000606248 DNMT3AQ9Y6K1 912 aaPredicted RBP13.38□□□□□ -0.27
MED16-210ENST00000606248 GFYI3L273 518 aa13.38□□□□□ -0.27
MED16-210ENST00000606248 SGTAO43765 313 aa13.38□□□□□ -0.27
MED16-210ENST00000606248 GASTP01350 101 aa13.38□□□□□ -0.27
MED16-210ENST00000606248 STATHP02808 62 aa13.38□□□□□ -0.27
MED16-210ENST00000606248 CNR2P34972 360 aa13.38□□□□□ -0.27
MED16-210ENST00000606248 C2orf80Q0P641 193 aa13.38□□□□□ -0.27
MED16-210ENST00000606248 RSBN1Q5VWQ0 802 aaPredicted RBP13.38□□□□□ -0.27
MED16-210ENST00000606248 RBM45Q8IUH3 476 aaKnown RBP13.38□□□□□ -0.27
MED16-210ENST00000606248 OR8J2Q8NGG1 315 aa13.38□□□□□ -0.27
MED16-210ENST00000606248 C2orf15Q8WU43 125 aaKnown RBP13.38□□□□□ -0.27
MED16-210ENST00000606248 IPCEF1Q8WWN9 437 aaPredicted RBP13.38□□□□□ -0.27
MED16-210ENST00000606248 IL17FQ96PD4 163 aa13.38□□□□□ -0.27
MED16-210ENST00000606248 VPS35Q96QK1 796 aa13.38□□□□□ -0.27
MED16-210ENST00000606248 WFDC6Q9BQY6 131 aa13.38□□□□□ -0.27
MED16-210ENST00000606248 WRAP53Q9BUR4 548 aaKnown RBP13.38□□□□□ -0.27
MED16-210ENST00000606248 NUAK2Q9H093 628 aa13.38□□□□□ -0.27
MED16-210ENST00000606248 ABCG4Q9H172 646 aa13.38□□□□□ -0.27
MED16-210ENST00000606248 FAM120CQ9NX05 1096 aaKnown RBP13.38□□□□□ -0.27
MED16-210ENST00000606248 TMED5Q9Y3A6 229 aa13.38□□□□□ -0.27
MED16-210ENST00000606248 NUAK1O60285 661 aa13.38□□□□□ -0.27
MED16-210ENST00000606248 KLK1P06870 262 aa13.38□□□□□ -0.27
MED16-210ENST00000606248 ZNF8P17098 575 aaPredicted RBP13.38□□□□□ -0.27
MED16-210ENST00000606248 METAP1P53582 386 aa13.38□□□□□ -0.27
MED16-210ENST00000606248 LSM11P83369 360 aaKnown RBP eCLIP13.38□□□□□ -0.27
MED16-210ENST00000606248 DBPQ10586 325 aaPredicted RBP13.38□□□□□ -0.27
MED16-210ENST00000606248 MTA1Q13330 715 aa13.38□□□□□ -0.27
MED16-210ENST00000606248 IRF3Q14653 427 aa13.38□□□□□ -0.27
MED16-210ENST00000606248 MPEG1Q2M385 716 aa13.38□□□□□ -0.27
MED16-210ENST00000606248 ERICH5Q6P6B1 374 aa13.38□□□□□ -0.27
MED16-210ENST00000606248 ARMCX6Q7L4S7 300 aa13.38□□□□□ -0.27
MED16-210ENST00000606248 ELMOD1Q8N336 334 aa13.38□□□□□ -0.27
MED16-210ENST00000606248 AMER2Q8N7J2 671 aa13.38□□□□□ -0.27
MED16-210ENST00000606248 MYDGFQ969H8 173 aa13.38□□□□□ -0.27
MED16-210ENST00000606248 PITX2Q99697 317 aa13.38□□□□□ -0.27
MED16-210ENST00000606248 BEX2Q9BXY8 128 aa13.38□□□□□ -0.27
MED16-210ENST00000606248 MMP27Q9H306 513 aa13.38□□□□□ -0.27
MED16-210ENST00000606248 TP63Q9H3D4 680 aaPredicted RBP13.38□□□□□ -0.27
MED16-210ENST00000606248 FAM83DQ9H4H8 585 aa13.38□□□□□ -0.27
MED16-210ENST00000606248 IL21Q9HBE4 155 aa13.38□□□□□ -0.27
MED16-210ENST00000606248 AGAP14A8MT82 685 aa13.37□□□□□ -0.27
MED16-210ENST00000606248 PLK4O00444 970 aa13.37□□□□□ -0.27
MED16-210ENST00000606248 KMOO15229 486 aa13.37□□□□□ -0.27
MED16-210ENST00000606248 ZW10O43264 779 aa13.37□□□□□ -0.27
MED16-210ENST00000606248 ASNA1O43681 348 aa13.37□□□□□ -0.27
MED16-210ENST00000606248 MFN2O95140 757 aa13.37□□□□□ -0.27
MED16-210ENST00000606248 IMPA1P29218 277 aa13.37□□□□□ -0.27
MED16-210ENST00000606248 TAS2R50P59544 299 aa13.37□□□□□ -0.27
MED16-210ENST00000606248 FAM214AQ32MH5 1076 aa13.37□□□□□ -0.27
MED16-210ENST00000606248 PTCHD4Q6ZW05 846 aa13.37□□□□□ -0.27
MED16-210ENST00000606248 NANOGNBQ7Z5D8 188 aa13.37□□□□□ -0.27
MED16-210ENST00000606248 VPS37AQ8NEZ2 397 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms