RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 CLPTM1LQ96KA5 538 aa4.83□□□□□ -1.64
SPTBN1-206ENST00000602898 DCUN1D5Q9BTE7 237 aa4.83□□□□□ -1.64
SPTBN1-206ENST00000602898 MYL10Q9BUA6 226 aa4.83□□□□□ -1.64
SPTBN1-206ENST00000602898 IDI2Q9BXS1 227 aa4.83□□□□□ -1.64
SPTBN1-206ENST00000602898 WWP1Q9H0M0 922 aa4.83□□□□□ -1.64
SPTBN1-206ENST00000602898 GEMIN7Q9H840 131 aaKnown RBP4.83□□□□□ -1.64
SPTBN1-206ENST00000602898 CAB39LQ9H9S4 337 aa4.83□□□□□ -1.64
SPTBN1-206ENST00000602898 NMUR1Q9HB89 426 aa4.83□□□□□ -1.64
SPTBN1-206ENST00000602898 GPN1Q9HCN4 374 aaPredicted RBP4.83□□□□□ -1.64
SPTBN1-206ENST00000602898 MKKSQ9NPJ1 570 aaPredicted RBP4.83□□□□□ -1.64
SPTBN1-206ENST00000602898 CHRAC1Q9NRG0 131 aa4.83□□□□□ -1.64
SPTBN1-206ENST00000602898 PIGVQ9NUD9 493 aa4.83□□□□□ -1.64
SPTBN1-206ENST00000602898 DNAJC17Q9NVM6 304 aaKnown RBP4.83□□□□□ -1.64
SPTBN1-206ENST00000602898 B3GNT2Q9NY97 397 aa4.83□□□□□ -1.64
SPTBN1-206ENST00000602898 HEY2Q9UBP5 337 aa4.83□□□□□ -1.64
SPTBN1-206ENST00000602898 TJP2Q9UDY2 1190 aa4.83□□□□□ -1.64
SPTBN1-206ENST00000602898 EBF1Q9UH73 591 aa4.83□□□□□ -1.64
SPTBN1-206ENST00000602898 SIX4Q9UIU6 781 aa4.83□□□□□ -1.64
SPTBN1-206ENST00000602898 COPS3Q9UNS2 423 aa4.83□□□□□ -1.64
SPTBN1-206ENST00000602898 ZFR2Q9UPR6 939 aaKnown RBP4.83□□□□□ -1.64
SPTBN1-206ENST00000602898 EXOGQ9Y2C4 368 aaKnown RBP4.83□□□□□ -1.64
SPTBN1-206ENST00000602898 MAP3K2Q9Y2U5 619 aa4.83□□□□□ -1.64
SPTBN1-206ENST00000602898 DUOX1Q9NRD9 1551 aa4.83□□□□□ -1.64
SPTBN1-206ENST00000602898 BCLAF3A2AJT9 711 aaKnown RBP4.83□□□□□ -1.64
SPTBN1-206ENST00000602898 H7C4K7 107 aa4.83□□□□□ -1.64
SPTBN1-206ENST00000602898 NR5A2O00482 541 aa4.83□□□□□ -1.64
SPTBN1-206ENST00000602898 ADAP1O75689 374 aa4.83□□□□□ -1.64
SPTBN1-206ENST00000602898 SCO1O75880 301 aa4.83□□□□□ -1.64
SPTBN1-206ENST00000602898 GOT2P00505 430 aaKnown RBP4.83□□□□□ -1.64
SPTBN1-206ENST00000602898 PROS1P07225 676 aa4.83□□□□□ -1.64
SPTBN1-206ENST00000602898 COX5BP10606 129 aa4.83□□□□□ -1.64
SPTBN1-206ENST00000602898 PAICSP22234 425 aaKnown RBP4.83□□□□□ -1.64
SPTBN1-206ENST00000602898 GJC1P36383 396 aa4.83□□□□□ -1.64
SPTBN1-206ENST00000602898 SERPINH1P50454 418 aaKnown RBP4.83□□□□□ -1.64
SPTBN1-206ENST00000602898 RAB13P51153 203 aa4.83□□□□□ -1.64
SPTBN1-206ENST00000602898 CLCN7P51798 805 aa4.83□□□□□ -1.64
SPTBN1-206ENST00000602898 DGKQP52824 942 aa4.83□□□□□ -1.64
SPTBN1-206ENST00000602898 BNC1Q01954 994 aa4.83□□□□□ -1.64
SPTBN1-206ENST00000602898 TEKQ02763 1124 aa4.83□□□□□ -1.64
SPTBN1-206ENST00000602898 PRKAA1Q13131 559 aa4.83□□□□□ -1.64
SPTBN1-206ENST00000602898 GRAPQ13588 217 aa4.83□□□□□ -1.64
SPTBN1-206ENST00000602898 RRP1BQ14684 758 aaKnown RBP4.83□□□□□ -1.64
SPTBN1-206ENST00000602898 SLC36A3Q495N2 470 aa4.83□□□□□ -1.64
SPTBN1-206ENST00000602898 CRY2Q49AN0 593 aa4.83□□□□□ -1.64
SPTBN1-206ENST00000602898 OGFRL1Q5TC84 451 aaPredicted RBP4.83□□□□□ -1.64
SPTBN1-206ENST00000602898 MLIPQ5VWP3 458 aa4.83□□□□□ -1.64
SPTBN1-206ENST00000602898 SLC39A4Q6P5W5 647 aa4.83□□□□□ -1.64
SPTBN1-206ENST00000602898 ZDHHC24Q6UX98 284 aa4.83□□□□□ -1.64
SPTBN1-206ENST00000602898 HSDL2Q6YN16 418 aa4.83□□□□□ -1.64
SPTBN1-206ENST00000602898 DCXRQ7Z4W1 244 aa4.83□□□□□ -1.64
SPTBN1-206ENST00000602898 CLNKQ7Z7G1 428 aa4.83□□□□□ -1.64
SPTBN1-206ENST00000602898 LACC1Q8IV20 430 aa4.83□□□□□ -1.64
SPTBN1-206ENST00000602898 SMYD4Q8IYR2 804 aaPredicted RBP4.83□□□□□ -1.64
SPTBN1-206ENST00000602898 MMP21Q8N119 569 aa4.83□□□□□ -1.64
SPTBN1-206ENST00000602898 MCUQ8NE86 351 aa4.83□□□□□ -1.64
SPTBN1-206ENST00000602898 C4orf36Q96KX1 117 aa4.83□□□□□ -1.64
SPTBN1-206ENST00000602898 TECTBQ96PL2 329 aa4.83□□□□□ -1.64
SPTBN1-206ENST00000602898 ALKBH7Q9BT30 221 aaPredicted RBP4.83□□□□□ -1.64
SPTBN1-206ENST00000602898 ZNF350Q9GZX5 532 aa4.83□□□□□ -1.64
SPTBN1-206ENST00000602898 HIPK2Q9H2X6 1198 aa4.83□□□□□ -1.64
SPTBN1-206ENST00000602898 ZNF556Q9HAH1 456 aa4.83□□□□□ -1.64
SPTBN1-206ENST00000602898 LRRC4CQ9HCJ2 640 aa4.83□□□□□ -1.64
SPTBN1-206ENST00000602898 HEYLQ9NQ87 328 aaPredicted RBP4.83□□□□□ -1.64
SPTBN1-206ENST00000602898 UFSP2Q9NUQ7 469 aa4.83□□□□□ -1.64
SPTBN1-206ENST00000602898 CMTM6Q9NX76 183 aa4.83□□□□□ -1.64
SPTBN1-206ENST00000602898 SLCO1C1Q9NYB5 712 aa4.83□□□□□ -1.64
SPTBN1-206ENST00000602898 RBAKQ9NYW8 714 aaPredicted RBP4.83□□□□□ -1.64
SPTBN1-206ENST00000602898 CLEC1BQ9P126 229 aa4.83□□□□□ -1.64
SPTBN1-206ENST00000602898 ARPP21Q9UBL0 812 aaPredicted RBP4.83□□□□□ -1.64
SPTBN1-206ENST00000602898 KLQ9UEF7 1012 aa4.83□□□□□ -1.64
SPTBN1-206ENST00000602898 USP18Q9UMW8 372 aa4.83□□□□□ -1.64
SPTBN1-206ENST00000602898 CTNND2Q9UQB3 1225 aa4.83□□□□□ -1.64
SPTBN1-206ENST00000602898 KLK4Q9Y5K2 254 aa4.83□□□□□ -1.64
SPTBN1-206ENST00000602898 SLC22A7Q9Y694 548 aa4.83□□□□□ -1.64
SPTBN1-206ENST00000602898 MEGF6O75095 1541 aa4.83□□□□□ -1.64
SPTBN1-206ENST00000602898 NFAT5O94916 1531 aa4.83□□□□□ -1.64
SPTBN1-206ENST00000602898 MN1Q10571 1320 aaPredicted RBP4.83□□□□□ -1.64
SPTBN1-206ENST00000602898 FER1L6Q2WGJ9 1857 aa4.83□□□□□ -1.64
SPTBN1-206ENST00000602898 H0Y8X5 98 aa4.83□□□□□ -1.64
SPTBN1-206ENST00000602898 H0YIG0 161 aa4.83□□□□□ -1.64
SPTBN1-206ENST00000602898 H3BMQ9 156 aa4.83□□□□□ -1.64
SPTBN1-206ENST00000602898 ZNF561-AS1K7EIQ3 104 aa4.83□□□□□ -1.64
SPTBN1-206ENST00000602898 EIF1BO60739 113 aaKnown RBP4.83□□□□□ -1.64
SPTBN1-206ENST00000602898 TM7SF2O76062 418 aa4.83□□□□□ -1.64
SPTBN1-206ENST00000602898 WDR47O94967 919 aa4.83□□□□□ -1.64
SPTBN1-206ENST00000602898 GNSP15586 552 aa4.83□□□□□ -1.64
SPTBN1-206ENST00000602898 TCF4P15884 667 aa4.83□□□□□ -1.64
SPTBN1-206ENST00000602898 PTPN1P18031 435 aaKnown RBP4.83□□□□□ -1.64
SPTBN1-206ENST00000602898 SRMP19623 302 aa4.83□□□□□ -1.64
SPTBN1-206ENST00000602898 ITIH2P19823 946 aa4.83□□□□□ -1.64
SPTBN1-206ENST00000602898 UCP1P25874 307 aa4.83□□□□□ -1.64
SPTBN1-206ENST00000602898 CYP2C18P33260 490 aa4.83□□□□□ -1.64
SPTBN1-206ENST00000602898 BSGP35613 385 aa4.83□□□□□ -1.64
SPTBN1-206ENST00000602898 EIF2S3P41091 472 aaKnown RBP4.83□□□□□ -1.64
SPTBN1-206ENST00000602898 EIF1P41567 113 aaKnown RBP4.83□□□□□ -1.64
SPTBN1-206ENST00000602898 SLC11A2P49281 568 aa4.83□□□□□ -1.64
SPTBN1-206ENST00000602898 RIDAP52758 137 aaKnown RBP4.83□□□□□ -1.64
SPTBN1-206ENST00000602898 RIPPLY1Q0D2K3 151 aa4.83□□□□□ -1.64
SPTBN1-206ENST00000602898 LRRC14Q15048 493 aa4.83□□□□□ -1.64
SPTBN1-206ENST00000602898 MAN2A1Q16706 1144 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms