RNA–Protein interactions for RNA: ENST00000602140.1

RPS28-204, Transcript of ribosomal protein S28, humanhuman

TSL 1 (best)

Gene RPS28, Length 912 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-204ENST00000602140 THOC6Q86W42 341 aaKnown RBP12.33□□□□□ -0.44
RPS28-204ENST00000602140 SIAH3Q8IW03 269 aa12.33□□□□□ -0.44
RPS28-204ENST00000602140 PDLIM5Q96HC4 596 aaKnown RBP12.33□□□□□ -0.44
RPS28-204ENST00000602140 PHF12Q96QT6 1004 aa12.33□□□□□ -0.44
RPS28-204ENST00000602140 AIF1LQ9BQI0 150 aa12.33□□□□□ -0.44
RPS28-204ENST00000602140 SLC6A16Q9GZN6 736 aa12.33□□□□□ -0.44
RPS28-204ENST00000602140 RHBGQ9H310 441 aa12.33□□□□□ -0.44
RPS28-204ENST00000602140 SNX12Q9UMY4 172 aa12.33□□□□□ -0.44
RPS28-204ENST00000602140 CHMP2BQ9UQN3 213 aa12.33□□□□□ -0.44
RPS28-204ENST00000602140 MEMO1Q9Y316 297 aa12.33□□□□□ -0.44
RPS28-204ENST00000602140 DYRK1BQ9Y463 629 aa12.33□□□□□ -0.44
RPS28-204ENST00000602140 PDZD2O15018 2839 aa12.33□□□□□ -0.44
RPS28-204ENST00000602140 DCHS2Q6V1P9 2916 aa12.32□□□□□ -0.44
RPS28-204ENST00000602140 URADA6NGE7 173 aa12.32□□□□□ -0.44
RPS28-204ENST00000602140 SAGE2PA6NJ88 616 aa12.32□□□□□ -0.44
RPS28-204ENST00000602140 A8MUA0 341 aa12.32□□□□□ -0.44
RPS28-204ENST00000602140 PSMD12O00232 456 aaPredicted RBP12.32□□□□□ -0.44
RPS28-204ENST00000602140 CES2O00748 559 aa12.32□□□□□ -0.44
RPS28-204ENST00000602140 CDK2AP1O14519 115 aa12.32□□□□□ -0.44
RPS28-204ENST00000602140 NME2P1O60361 137 aa12.32□□□□□ -0.44
RPS28-204ENST00000602140 RNH1P13489 461 aaKnown RBP12.32□□□□□ -0.44
RPS28-204ENST00000602140 ABOP16442 354 aa12.32□□□□□ -0.44
RPS28-204ENST00000602140 AGAP20933 346 aa12.32□□□□□ -0.44
RPS28-204ENST00000602140 SAT1P21673 171 aa12.32□□□□□ -0.44
RPS28-204ENST00000602140 NME2P22392 152 aa12.32□□□□□ -0.44
RPS28-204ENST00000602140 IVDP26440 423 aa12.32□□□□□ -0.44
RPS28-204ENST00000602140 CYB561P49447 251 aa12.32□□□□□ -0.44
RPS28-204ENST00000602140 MLF1P58340 268 aa12.32□□□□□ -0.44
RPS28-204ENST00000602140 HSF1Q00613 529 aa12.32□□□□□ -0.44
RPS28-204ENST00000602140 HYAL2Q12891 473 aa12.32□□□□□ -0.44
RPS28-204ENST00000602140 CDSNQ15517 529 aa12.32□□□□□ -0.44
RPS28-204ENST00000602140 PPP1R3AQ16821 1122 aa12.32□□□□□ -0.44
RPS28-204ENST00000602140 RNFT1Q5M7Z0 435 aa12.32□□□□□ -0.44
RPS28-204ENST00000602140 NXPE4Q6UWF7 544 aa12.32□□□□□ -0.44
RPS28-204ENST00000602140 NCCRP1Q6ZVX7 275 aaPredicted RBP12.32□□□□□ -0.44
RPS28-204ENST00000602140 ZNF227Q86WZ6 799 aa12.32□□□□□ -0.44
RPS28-204ENST00000602140 PDIK1LQ8N165 341 aa12.32□□□□□ -0.44
RPS28-204ENST00000602140 GHDCQ8N2G8 530 aa12.32□□□□□ -0.44
RPS28-204ENST00000602140 CPSF7Q8N684 471 aaKnown RBP12.32□□□□□ -0.44
RPS28-204ENST00000602140 TRPV3Q8NET8 790 aa12.32□□□□□ -0.44
RPS28-204ENST00000602140 TRIM51Q9BSJ1 452 aa12.32□□□□□ -0.44
RPS28-204ENST00000602140 KLHL31Q9H511 634 aa12.32□□□□□ -0.44
RPS28-204ENST00000602140 PELI2Q9HAT8 420 aa12.32□□□□□ -0.44
RPS28-204ENST00000602140 CLK4Q9HAZ1 481 aaKnown RBP12.32□□□□□ -0.44
RPS28-204ENST00000602140 GPAMQ9HCL2 828 aa12.32□□□□□ -0.44
RPS28-204ENST00000602140 NECTIN3Q9NQS3 549 aa12.32□□□□□ -0.44
RPS28-204ENST00000602140 PRDM9Q9NQV7 894 aa12.32□□□□□ -0.44
RPS28-204ENST00000602140 SLC22A14Q9Y267 594 aa12.32□□□□□ -0.44
RPS28-204ENST00000602140 IGKV3D-11A0A0A0MRZ8 115 aa12.31□□□□□ -0.44
RPS28-204ENST00000602140 TCRBV16S1A1N1A0A5B0 115 aa12.31□□□□□ -0.44
RPS28-204ENST00000602140 C4orf51C9J302 202 aa12.31□□□□□ -0.44
RPS28-204ENST00000602140 CDC7O00311 574 aa12.31□□□□□ -0.44
RPS28-204ENST00000602140 SMIM10L1P0DMW3 83 aa12.31□□□□□ -0.44
RPS28-204ENST00000602140 ZNF24P17028 368 aa12.31□□□□□ -0.44
RPS28-204ENST00000602140 ZNF37AP17032 561 aaPredicted RBP12.31□□□□□ -0.44
RPS28-204ENST00000602140 ITGA8P53708 1063 aa12.31□□□□□ -0.44
RPS28-204ENST00000602140 MORF4L2Q15014 288 aa12.31□□□□□ -0.44
RPS28-204ENST00000602140 TOR1AIP1Q5JTV8 583 aa12.31□□□□□ -0.44
RPS28-204ENST00000602140 ARMC2Q8NEN0 867 aa12.31□□□□□ -0.44
RPS28-204ENST00000602140 NFAM1Q8NET5 270 aaPredicted RBP12.31□□□□□ -0.44
RPS28-204ENST00000602140 AGAP11Q8TF27 550 aa12.31□□□□□ -0.44
RPS28-204ENST00000602140 SLCO2A1Q92959 643 aa12.31□□□□□ -0.44
RPS28-204ENST00000602140 TMEM125Q96AQ2 219 aa12.31□□□□□ -0.44
RPS28-204ENST00000602140 MTFMTQ96DP5 389 aaKnown RBP12.31□□□□□ -0.44
RPS28-204ENST00000602140 SMIM10Q96HG1 83 aa12.31□□□□□ -0.44
RPS28-204ENST00000602140 EGFL8Q99944 293 aa12.31□□□□□ -0.44
RPS28-204ENST00000602140 WDR83Q9BRX9 315 aaKnown RBP12.31□□□□□ -0.44
RPS28-204ENST00000602140 DEFB126Q9BYW3 111 aa12.31□□□□□ -0.44
RPS28-204ENST00000602140 AICDAQ9GZX7 198 aa12.31□□□□□ -0.44
RPS28-204ENST00000602140 TRIM45Q9H8W5 580 aaPredicted RBP12.31□□□□□ -0.44
RPS28-204ENST00000602140 ZFATQ9P243 1243 aa12.31□□□□□ -0.44
RPS28-204ENST00000602140 TEX264Q9Y6I9 313 aa12.31□□□□□ -0.44
RPS28-204ENST00000602140 KCNE2Q9Y6J6 123 aa12.31□□□□□ -0.44
RPS28-204ENST00000602140 TACC2O95359 2948 aa12.3□□□□□ -0.44
RPS28-204ENST00000602140 NPEPPSL1A6NEC2 478 aa12.3□□□□□ -0.44
RPS28-204ENST00000602140 C19orf84I3L1E1 186 aa12.3□□□□□ -0.44
RPS28-204ENST00000602140 FCHO1O14526 889 aa12.3□□□□□ -0.44
RPS28-204ENST00000602140 CLDN14O95500 239 aa12.3□□□□□ -0.44
RPS28-204ENST00000602140 SERPINA6P08185 405 aa12.3□□□□□ -0.44
RPS28-204ENST00000602140 POU3F2P20265 443 aaPredicted RBP12.3□□□□□ -0.44
RPS28-204ENST00000602140 TRHRP34981 398 aaPredicted RBP12.3□□□□□ -0.44
RPS28-204ENST00000602140 HLCSP50747 726 aa12.3□□□□□ -0.44
RPS28-204ENST00000602140 BTN3A2P78410 334 aa12.3□□□□□ -0.44
RPS28-204ENST00000602140 ZNF460Q14592 562 aa12.3□□□□□ -0.44
RPS28-204ENST00000602140 STEAP4Q687X5 459 aa12.3□□□□□ -0.44
RPS28-204ENST00000602140 C3P1Q6ZMU1 363 aa12.3□□□□□ -0.44
RPS28-204ENST00000602140 DOLPP1Q86YN1 238 aa12.3□□□□□ -0.44
RPS28-204ENST00000602140 ANKMY2Q8IV38 441 aa12.3□□□□□ -0.44
RPS28-204ENST00000602140 CHERPQ8IWX8 916 aaKnown RBP12.3□□□□□ -0.44
RPS28-204ENST00000602140 CA13Q8N1Q1 262 aa12.3□□□□□ -0.44
RPS28-204ENST00000602140 NKAPQ8N5F7 415 aaKnown RBP12.3□□□□□ -0.44
RPS28-204ENST00000602140 CREB3L4Q8TEY5 395 aa12.3□□□□□ -0.44
RPS28-204ENST00000602140 LRRC39Q96DD0 335 aa12.3□□□□□ -0.44
RPS28-204ENST00000602140 LURAP1Q96LR2 239 aa12.3□□□□□ -0.44
RPS28-204ENST00000602140 TRIM8Q9BZR9 551 aa12.3□□□□□ -0.44
RPS28-204ENST00000602140 PSAT1Q9Y617 370 aa12.3□□□□□ -0.44
RPS28-204ENST00000602140 A0A0G2JN53 185 aa12.29□□□□□ -0.44
RPS28-204ENST00000602140 TRBV11-1A0A0K0K1C0 115 aa12.29□□□□□ -0.44
RPS28-204ENST00000602140 FAM95CA0A1B0GW59 222 aa12.29□□□□□ -0.44
RPS28-204ENST00000602140 PRRG2O14669 202 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms