RNA–Protein interactions for RNA: ENST00000601912.5

VRK3-225, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-225ENST00000601912 TCTN2Q96GX1 697 aa17.15■□□□□ 0.34
VRK3-225ENST00000601912 TGM7Q96PF1 710 aa17.15■□□□□ 0.34
VRK3-225ENST00000601912 CDRT15Q96T59 188 aa17.15■□□□□ 0.34
VRK3-225ENST00000601912 MAP3K3Q99759 626 aa17.15■□□□□ 0.34
VRK3-225ENST00000601912 CCDC3Q9BQI4 270 aa17.15■□□□□ 0.34
VRK3-225ENST00000601912 TBCDQ9BTW9 1192 aa17.15■□□□□ 0.34
VRK3-225ENST00000601912 GTPBP2Q9BX10 602 aaKnown RBP17.15■□□□□ 0.34
VRK3-225ENST00000601912 ARRDC1-AS1Q9H2J1 176 aa17.15■□□□□ 0.34
VRK3-225ENST00000601912 REEP4Q9H6H4 257 aa17.15■□□□□ 0.34
VRK3-225ENST00000601912 IL1RL2Q9HB29 575 aa17.15■□□□□ 0.34
VRK3-225ENST00000601912 SPAG4Q9NPE6 437 aa17.15■□□□□ 0.34
VRK3-225ENST00000601912 PCDHGA7Q9Y5G6 932 aa17.15■□□□□ 0.34
VRK3-225ENST00000601912 A0A088AWK7 358 aa17.14■□□□□ 0.33
VRK3-225ENST00000601912 TLCD2A6NGC4 264 aa17.14■□□□□ 0.33
VRK3-225ENST00000601912 H0YGG7 62 aa17.14■□□□□ 0.33
VRK3-225ENST00000601912 TNFRSF10AO00220 468 aa17.14■□□□□ 0.33
VRK3-225ENST00000601912 KHNYNO15037 678 aaKnown RBP17.14■□□□□ 0.33
VRK3-225ENST00000601912 KCNH1O95259 989 aa17.14■□□□□ 0.33
VRK3-225ENST00000601912 PNLIPP16233 465 aa17.14■□□□□ 0.33
VRK3-225ENST00000601912 ATXN3P54252 364 aaPredicted RBP17.14■□□□□ 0.33
VRK3-225ENST00000601912 ARF3P61204 181 aaPredicted RBP17.14■□□□□ 0.33
VRK3-225ENST00000601912 C2orf80Q0P641 193 aa17.14■□□□□ 0.33
VRK3-225ENST00000601912 UGT8Q16880 541 aa17.14■□□□□ 0.33
VRK3-225ENST00000601912 MANEAQ5SRI9 462 aa17.14■□□□□ 0.33
VRK3-225ENST00000601912 CPTPQ5TA50 214 aa17.14■□□□□ 0.33
VRK3-225ENST00000601912 NKAIN2Q5VXU1 208 aa17.14■□□□□ 0.33
VRK3-225ENST00000601912 ABHD17CQ6PCB6 329 aa17.14■□□□□ 0.33
VRK3-225ENST00000601912 PLXDC1Q8IUK5 500 aa17.14■□□□□ 0.33
VRK3-225ENST00000601912 MINDY1Q8N5J2 469 aa17.14■□□□□ 0.33
VRK3-225ENST00000601912 OR7A2PQ8NGA2 310 aa17.14■□□□□ 0.33
VRK3-225ENST00000601912 OR8J2Q8NGG1 315 aa17.14■□□□□ 0.33
VRK3-225ENST00000601912 DNAJB8Q8NHS0 232 aa17.14■□□□□ 0.33
VRK3-225ENST00000601912 GAL3ST3Q96A11 431 aa17.14■□□□□ 0.33
VRK3-225ENST00000601912 NLNQ9BYT8 704 aa17.14■□□□□ 0.33
VRK3-225ENST00000601912 SYNPO2LQ9H987 977 aa17.14■□□□□ 0.33
VRK3-225ENST00000601912 LHX9Q9NQ69 397 aa17.14■□□□□ 0.33
VRK3-225ENST00000601912 ATAD3AQ9NVI7 634 aa17.14■□□□□ 0.33
VRK3-225ENST00000601912 GABRR3A8MPY1 467 aa17.13■□□□□ 0.33
VRK3-225ENST00000601912 ZSCAN9O15535 394 aaPredicted RBP17.13■□□□□ 0.33
VRK3-225ENST00000601912 SIGLEC6O43699 453 aa17.13■□□□□ 0.33
VRK3-225ENST00000601912 PCDHGA12O60330 932 aa17.13■□□□□ 0.33
VRK3-225ENST00000601912 PRAMEF10O60809 474 aa17.13■□□□□ 0.33
VRK3-225ENST00000601912 CIB2O75838 187 aa17.13■□□□□ 0.33
VRK3-225ENST00000601912 DDX5P17844 614 aaKnown RBP17.13■□□□□ 0.33
VRK3-225ENST00000601912 TRA2BP62995 288 aaKnown RBP17.13■□□□□ 0.33
VRK3-225ENST00000601912 AMZ1Q400G9 498 aa17.13■□□□□ 0.33
VRK3-225ENST00000601912 C6orf10Q5SRN2 563 aa17.13■□□□□ 0.33
VRK3-225ENST00000601912 C6orf163Q5TEZ5 329 aa17.13■□□□□ 0.33
VRK3-225ENST00000601912 FAM71E1Q6IPT2 247 aa17.13■□□□□ 0.33
VRK3-225ENST00000601912 DHDDSQ86SQ9 333 aa17.13■□□□□ 0.33
VRK3-225ENST00000601912 CARFQ8N187 725 aa17.13■□□□□ 0.33
VRK3-225ENST00000601912 FBXW8Q8N3Y1 598 aa17.13■□□□□ 0.33
VRK3-225ENST00000601912 Q8N9G6 341 aaPredicted RBP17.13■□□□□ 0.33
VRK3-225ENST00000601912 VPS37AQ8NEZ2 397 aa17.13■□□□□ 0.33
VRK3-225ENST00000601912 MTERF3Q96E29 417 aa17.13■□□□□ 0.33
VRK3-225ENST00000601912 ITCHQ96J02 903 aa17.13■□□□□ 0.33
VRK3-225ENST00000601912 CLPTM1LQ96KA5 538 aa17.13■□□□□ 0.33
VRK3-225ENST00000601912 ROGDIQ9GZN7 287 aa17.13■□□□□ 0.33
VRK3-225ENST00000601912 AICDAQ9GZX7 198 aa17.13■□□□□ 0.33
VRK3-225ENST00000601912 COPS7BQ9H9Q2 264 aaPredicted RBP17.13■□□□□ 0.33
VRK3-225ENST00000601912 FAM120CQ9NX05 1096 aaKnown RBP17.13■□□□□ 0.33
VRK3-225ENST00000601912 ADA2Q9NZK5 511 aa17.13■□□□□ 0.33
VRK3-225ENST00000601912 ATP6V1HQ9UI12 483 aa17.13■□□□□ 0.33
VRK3-225ENST00000601912 ARID1BQ8NFD5 2236 aaPredicted RBP17.13■□□□□ 0.33
VRK3-225ENST00000601912 KMT2EQ8IZD2 1858 aa17.13■□□□□ 0.33
VRK3-225ENST00000601912 LOC105369274A0A096LPK9 316 aa17.13■□□□□ 0.33
VRK3-225ENST00000601912 A0A0G2JN53 185 aa17.13■□□□□ 0.33
VRK3-225ENST00000601912 LOC102723532A0A0G2JNH3 316 aa17.13■□□□□ 0.33
VRK3-225ENST00000601912 PRR33A8MZF0 331 aa17.13■□□□□ 0.33
VRK3-225ENST00000601912 B4GAT1O43505 415 aa17.13■□□□□ 0.33
VRK3-225ENST00000601912 GUCY1B2O75343 617 aa17.13■□□□□ 0.33
VRK3-225ENST00000601912 KLHL18O94889 574 aa17.13■□□□□ 0.33
VRK3-225ENST00000601912 EIF2S1P05198 315 aaKnown RBP17.13■□□□□ 0.33
VRK3-225ENST00000601912 MYF5P13349 255 aa17.13■□□□□ 0.33
VRK3-225ENST00000601912 HIST1H1TP22492 207 aaPredicted RBP17.13■□□□□ 0.33
VRK3-225ENST00000601912 GFERP55789 205 aa17.13■□□□□ 0.33
VRK3-225ENST00000601912 ELF3P78545 371 aaPredicted RBP17.13■□□□□ 0.33
VRK3-225ENST00000601912 SLC9A5Q14940 896 aa17.13■□□□□ 0.33
VRK3-225ENST00000601912 HEPACAMQ14CZ8 416 aa17.13■□□□□ 0.33
VRK3-225ENST00000601912 FRMPD2BQ6IN97 320 aa17.13■□□□□ 0.33
VRK3-225ENST00000601912 C8orf82Q6P1X6 216 aaPredicted RBP17.13■□□□□ 0.33
VRK3-225ENST00000601912 CAMKMTQ7Z624 323 aa17.13■□□□□ 0.33
VRK3-225ENST00000601912 OR4N4Q8N0Y3 316 aa17.13■□□□□ 0.33
VRK3-225ENST00000601912 EID2Q8N6I1 236 aa17.13■□□□□ 0.33
VRK3-225ENST00000601912 KCT2Q8NC54 265 aa17.13■□□□□ 0.33
VRK3-225ENST00000601912 FAM13CQ8NE31 585 aa17.13■□□□□ 0.33
VRK3-225ENST00000601912 OR2I1PQ8NGU4 316 aa17.13■□□□□ 0.33
VRK3-225ENST00000601912 CCDC74AQ96AQ1 378 aa17.13■□□□□ 0.33
VRK3-225ENST00000601912 TEFMQ96QE5 360 aaKnown RBP17.13■□□□□ 0.33
VRK3-225ENST00000601912 DUSP26Q9BV47 211 aa17.13■□□□□ 0.33
VRK3-225ENST00000601912 MIEF1Q9NQG6 463 aa17.13■□□□□ 0.33
VRK3-225ENST00000601912 PRDM7Q9NQW5 492 aa17.13■□□□□ 0.33
VRK3-225ENST00000601912 SH3BP4Q9P0V3 963 aa17.13■□□□□ 0.33
VRK3-225ENST00000601912 R4GN57 208 aa17.13■□□□□ 0.33
VRK3-225ENST00000601912 USP34Q70CQ2 3546 aa17.13■□□□□ 0.33
VRK3-225ENST00000601912 ADAMTS9Q9P2N4 1935 aa17.12■□□□□ 0.33
VRK3-225ENST00000601912 A0A0A6YYD5 115 aa17.12■□□□□ 0.33
VRK3-225ENST00000601912 C15orf38-AP3S2A0A0A6YYH1 394 aa17.12■□□□□ 0.33
VRK3-225ENST00000601912 TXNDC9O14530 226 aa17.12■□□□□ 0.33
VRK3-225ENST00000601912 RASSF9O75901 435 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms