RNA–Protein interactions for RNA: ENST00000601150.5

TRIM28-215, Transcript of tripartite motif containing 28, humanhuman

TSL 3

Gene TRIM28, Length 915 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-215ENST00000601150 PEX11GQ96HA9 241 aa15.92■□□□□ 0.14
TRIM28-215ENST00000601150 FAR2Q96K12 515 aa15.92■□□□□ 0.14
TRIM28-215ENST00000601150 OR1F2PQ96R84 312 aa15.92■□□□□ 0.14
TRIM28-215ENST00000601150 IPPKQ9H8X2 491 aa15.92■□□□□ 0.14
TRIM28-215ENST00000601150 ACTR8Q9H981 624 aa15.92■□□□□ 0.14
TRIM28-215ENST00000601150 MLXIPLQ9NP71 852 aa15.92■□□□□ 0.14
TRIM28-215ENST00000601150 GPR83Q9NYM4 423 aa15.92■□□□□ 0.14
TRIM28-215ENST00000601150 DCDC2Q9UHG0 476 aa15.92■□□□□ 0.14
TRIM28-215ENST00000601150 DOCK10Q96BY6 2186 aa15.92■□□□□ 0.14
TRIM28-215ENST00000601150 A0A088AWK7 358 aa15.91■□□□□ 0.14
TRIM28-215ENST00000601150 A0A1W2PPM1 405 aa15.91■□□□□ 0.14
TRIM28-215ENST00000601150 B8ZZF3 427 aa15.91■□□□□ 0.14
TRIM28-215ENST00000601150 C4orf51C9J302 202 aa15.91■□□□□ 0.14
TRIM28-215ENST00000601150 K7EM74 188 aa15.91■□□□□ 0.14
TRIM28-215ENST00000601150 ERI3O43414 337 aaKnown RBP15.91■□□□□ 0.14
TRIM28-215ENST00000601150 UGDHO60701 494 aa15.91■□□□□ 0.14
TRIM28-215ENST00000601150 CDH16O75309 829 aa15.91■□□□□ 0.14
TRIM28-215ENST00000601150 ALOX12BO75342 701 aa15.91■□□□□ 0.14
TRIM28-215ENST00000601150 TBX6O95947 436 aaPredicted RBP15.91■□□□□ 0.14
TRIM28-215ENST00000601150 HPP00738 406 aa15.91■□□□□ 0.14
TRIM28-215ENST00000601150 PCNAP12004 261 aa15.91■□□□□ 0.14
TRIM28-215ENST00000601150 KRT15P19012 456 aa15.91■□□□□ 0.14
TRIM28-215ENST00000601150 TAC1P20366 129 aa15.91■□□□□ 0.14
TRIM28-215ENST00000601150 NR1D1P20393 614 aa15.91■□□□□ 0.14
TRIM28-215ENST00000601150 ZNF10P21506 573 aaPredicted RBP15.91■□□□□ 0.14
TRIM28-215ENST00000601150 SOX8P57073 446 aa15.91■□□□□ 0.14
TRIM28-215ENST00000601150 OLR1P78380 273 aa15.91■□□□□ 0.14
TRIM28-215ENST00000601150 BTN3A2P78410 334 aa15.91■□□□□ 0.14
TRIM28-215ENST00000601150 ADPRMQ3LIE5 342 aa15.91■□□□□ 0.14
TRIM28-215ENST00000601150 FAAH2Q6GMR7 532 aa15.91■□□□□ 0.14
TRIM28-215ENST00000601150 TRIM40Q6P9F5 258 aa15.91■□□□□ 0.14
TRIM28-215ENST00000601150 ASB18Q6ZVZ8 466 aa15.91■□□□□ 0.14
TRIM28-215ENST00000601150 SHISA5Q8N114 240 aa15.91■□□□□ 0.14
TRIM28-215ENST00000601150 GALNT16Q8N428 558 aa15.91■□□□□ 0.14
TRIM28-215ENST00000601150 OR2L5Q8NG80 312 aa15.91■□□□□ 0.14
TRIM28-215ENST00000601150 OR7G3Q8NG95 312 aa15.91■□□□□ 0.14
TRIM28-215ENST00000601150 ZNF473Q8WTR7 871 aaKnown RBP15.91■□□□□ 0.14
TRIM28-215ENST00000601150 METTL21AQ8WXB1 218 aa15.91■□□□□ 0.14
TRIM28-215ENST00000601150 CAVIN3Q969G5 261 aa15.91■□□□□ 0.14
TRIM28-215ENST00000601150 C8orf44Q96CB5 159 aa15.91■□□□□ 0.14
TRIM28-215ENST00000601150 MESP1Q9BRJ9 268 aa15.91■□□□□ 0.14
TRIM28-215ENST00000601150 VN1R1Q9GZP7 353 aa15.91■□□□□ 0.14
TRIM28-215ENST00000601150 REXO4Q9GZR2 422 aaKnown RBP15.91■□□□□ 0.14
TRIM28-215ENST00000601150 PRM3Q9NNZ6 103 aa15.91■□□□□ 0.14
TRIM28-215ENST00000601150 ADGRE2Q9UHX3 823 aa15.91■□□□□ 0.14
TRIM28-215ENST00000601150 PCTPQ9UKL6 214 aa15.91■□□□□ 0.14
TRIM28-215ENST00000601150 PCDHGB7Q9Y5F8 929 aa15.91■□□□□ 0.14
TRIM28-215ENST00000601150 PCDHGA11Q9Y5H2 935 aa15.91■□□□□ 0.14
TRIM28-215ENST00000601150 CFAP46Q8IYW2 2715 aa15.91■□□□□ 0.14
TRIM28-215ENST00000601150 LOC102723996A0A087X1L8 192 aa15.9■□□□□ 0.14
TRIM28-215ENST00000601150 A0A1W2PQ72 361 aa15.9■□□□□ 0.14
TRIM28-215ENST00000601150 A8MT66 165 aa15.9■□□□□ 0.14
TRIM28-215ENST00000601150 MASP2O00187 686 aa15.9■□□□□ 0.14
TRIM28-215ENST00000601150 KLHL41O60662 606 aa15.9■□□□□ 0.14
TRIM28-215ENST00000601150 DNAJB6O75190 326 aa15.9■□□□□ 0.14
TRIM28-215ENST00000601150 NUDT17P0C025 328 aa15.9■□□□□ 0.14
TRIM28-215ENST00000601150 C8orf89P0DMQ9 161 aa15.9■□□□□ 0.14
TRIM28-215ENST00000601150 RNH1P13489 461 aaKnown RBP15.9■□□□□ 0.14
TRIM28-215ENST00000601150 EFNA3P52797 238 aa15.9■□□□□ 0.14
TRIM28-215ENST00000601150 TGM3Q08188 693 aa15.9■□□□□ 0.14
TRIM28-215ENST00000601150 MYBPC3Q14896 1274 aa15.9■□□□□ 0.14
TRIM28-215ENST00000601150 TMEM205Q6UW68 189 aa15.9■□□□□ 0.14
TRIM28-215ENST00000601150 PTRH1Q86Y79 214 aaKnown RBP15.9■□□□□ 0.14
TRIM28-215ENST00000601150 CYP4X1Q8N118 509 aa15.9■□□□□ 0.14
TRIM28-215ENST00000601150 TBC1D20Q96BZ9 403 aa15.9■□□□□ 0.14
TRIM28-215ENST00000601150 REPS1Q96D71 796 aa15.9■□□□□ 0.14
TRIM28-215ENST00000601150 QRFPRQ96P65 431 aa15.9■□□□□ 0.14
TRIM28-215ENST00000601150 NUDT9Q9BW91 350 aa15.9■□□□□ 0.14
TRIM28-215ENST00000601150 NPLQ9BXD5 320 aaPredicted RBP15.9■□□□□ 0.14
TRIM28-215ENST00000601150 MS4A8Q9BY19 250 aa15.9■□□□□ 0.14
TRIM28-215ENST00000601150 PARD6BQ9BYG5 372 aa15.9■□□□□ 0.14
TRIM28-215ENST00000601150 RBCK1Q9BYM8 510 aa15.9■□□□□ 0.14
TRIM28-215ENST00000601150 NOL11Q9H8H0 719 aaKnown RBP15.9■□□□□ 0.14
TRIM28-215ENST00000601150 LANCL2Q9NS86 450 aa15.9■□□□□ 0.14
TRIM28-215ENST00000601150 ZNF451Q9Y4E5 1061 aa15.9■□□□□ 0.14
TRIM28-215ENST00000601150 HEMK1Q9Y5R4 338 aaPredicted RBP15.9■□□□□ 0.14
TRIM28-215ENST00000601150 IGHV1-45A0A0A0MS14 117 aa15.89■□□□□ 0.13
TRIM28-215ENST00000601150 NSG1A0A0A6YYJ2 146 aa15.89■□□□□ 0.13
TRIM28-215ENST00000601150 A0A0G2JN53 185 aa15.89■□□□□ 0.13
TRIM28-215ENST00000601150 FOXO6A8MYZ6 492 aa15.89■□□□□ 0.13
TRIM28-215ENST00000601150 PSMD12O00232 456 aaPredicted RBP15.89■□□□□ 0.13
TRIM28-215ENST00000601150 OR7A17O14581 309 aa15.89■□□□□ 0.13
TRIM28-215ENST00000601150 GLRA3O75311 464 aa15.89■□□□□ 0.13
TRIM28-215ENST00000601150 CLDN9O95484 217 aa15.89■□□□□ 0.13
TRIM28-215ENST00000601150 PDGFAP04085 211 aa15.89■□□□□ 0.13
TRIM28-215ENST00000601150 FHP07954 510 aa15.89■□□□□ 0.13
TRIM28-215ENST00000601150 RPS17P08708 135 aaKnown RBP15.89■□□□□ 0.13
TRIM28-215ENST00000601150 COX6A1P12074 109 aa15.89■□□□□ 0.13
TRIM28-215ENST00000601150 JAK1P23458 1154 aa15.89■□□□□ 0.13
TRIM28-215ENST00000601150 ITGA3P26006 1051 aa15.89■□□□□ 0.13
TRIM28-215ENST00000601150 ARL1P40616 181 aaPredicted RBP15.89■□□□□ 0.13
TRIM28-215ENST00000601150 CCNG1P51959 295 aa15.89■□□□□ 0.13
TRIM28-215ENST00000601150 PLA2G16P53816 162 aa15.89■□□□□ 0.13
TRIM28-215ENST00000601150 EEF1A2Q05639 463 aaKnown RBP15.89■□□□□ 0.13
TRIM28-215ENST00000601150 TMEM35AQ53FP2 167 aa15.89■□□□□ 0.13
TRIM28-215ENST00000601150 ABHD17CQ6PCB6 329 aa15.89■□□□□ 0.13
TRIM28-215ENST00000601150 NDUFAF7Q7L592 441 aa15.89■□□□□ 0.13
TRIM28-215ENST00000601150 RIBC1Q8N443 379 aaPredicted RBP15.89■□□□□ 0.13
TRIM28-215ENST00000601150 L3MBTL4Q8NA19 623 aa15.89■□□□□ 0.13
TRIM28-215ENST00000601150 SRFBP1Q8NEF9 429 aaKnown RBP15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms