RNA–Protein interactions for RNA: ENST00000598201.5

SHKBP1-216, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,069 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-216ENST00000598201 OR10Q1Q8NGQ4 319 aa16.29■□□□□ 0.2
SHKBP1-216ENST00000598201 VPS50Q96JG6 964 aa16.29■□□□□ 0.2
SHKBP1-216ENST00000598201 C9orf16Q9BUW7 83 aa16.29■□□□□ 0.2
SHKBP1-216ENST00000598201 OSBPL11Q9BXB4 747 aa16.29■□□□□ 0.2
SHKBP1-216ENST00000598201 UGT2B28Q9BY64 529 aa16.29■□□□□ 0.2
SHKBP1-216ENST00000598201 NT5DC2Q9H857 520 aa16.29■□□□□ 0.2
SHKBP1-216ENST00000598201 LHX9Q9NQ69 397 aa16.29■□□□□ 0.2
SHKBP1-216ENST00000598201 AASDHPPTQ9NRN7 309 aa16.29■□□□□ 0.2
SHKBP1-216ENST00000598201 SPHK1Q9NYA1 384 aa16.29■□□□□ 0.2
SHKBP1-216ENST00000598201 DNAH14Q0VDD8 3507 aa16.28■□□□□ 0.2
SHKBP1-216ENST00000598201 HBA1P69905 142 aa16.28■□□□□ 0.2
SHKBP1-216ENST00000598201 SFSWAPQ12872 951 aaKnown RBP16.28■□□□□ 0.2
SHKBP1-216ENST00000598201 TMTC4Q5T4D3 741 aa16.28■□□□□ 0.2
SHKBP1-216ENST00000598201 TBPL2Q6SJ96 375 aa16.28■□□□□ 0.2
SHKBP1-216ENST00000598201 LPCAT2Q7L5N7 544 aa16.28■□□□□ 0.2
SHKBP1-216ENST00000598201 PACRGLQ8N7B6 248 aa16.28■□□□□ 0.2
SHKBP1-216ENST00000598201 OR4A15Q8NGL6 344 aa16.28■□□□□ 0.2
SHKBP1-216ENST00000598201 PPCDCQ96CD2 204 aa16.28■□□□□ 0.2
SHKBP1-216ENST00000598201 SLC47A1Q96FL8 570 aa16.28■□□□□ 0.2
SHKBP1-216ENST00000598201 TMEM168Q9H0V1 697 aa16.28■□□□□ 0.2
SHKBP1-216ENST00000598201 SLC6A20Q9NP91 592 aa16.28■□□□□ 0.2
SHKBP1-216ENST00000598201 C2orf42Q9NWW7 574 aa16.28■□□□□ 0.2
SHKBP1-216ENST00000598201 SPASTQ9UBP0 616 aa16.28■□□□□ 0.2
SHKBP1-216ENST00000598201 RNF103-CHMP3A0A140T963 221 aa16.28■□□□□ 0.2
SHKBP1-216ENST00000598201 C10orf142B7Z368 130 aa16.28■□□□□ 0.2
SHKBP1-216ENST00000598201 PLOD2O00469 737 aa16.28■□□□□ 0.2
SHKBP1-216ENST00000598201 EI24O14681 340 aa16.28■□□□□ 0.2
SHKBP1-216ENST00000598201 AXIN1O15169 862 aa16.28■□□□□ 0.2
SHKBP1-216ENST00000598201 SEMA3DO95025 777 aa16.28■□□□□ 0.2
SHKBP1-216ENST00000598201 RASAL1O95294 804 aa16.28■□□□□ 0.2
SHKBP1-216ENST00000598201 APBB3O95704 486 aa16.28■□□□□ 0.2
SHKBP1-216ENST00000598201 SEMA4FO95754 770 aa16.28■□□□□ 0.2
SHKBP1-216ENST00000598201 C6orf47O95873 294 aa16.28■□□□□ 0.2
SHKBP1-216ENST00000598201 NUDT7P0C024 238 aa16.28■□□□□ 0.2
SHKBP1-216ENST00000598201 HOXB3P14651 431 aaPredicted RBP16.28■□□□□ 0.2
SHKBP1-216ENST00000598201 MAP7Q14244 749 aa16.28■□□□□ 0.2
SHKBP1-216ENST00000598201 CCNYL2Q5T2Q4 361 aa16.28■□□□□ 0.2
SHKBP1-216ENST00000598201 ABRAXAS1Q6UWZ7 409 aa16.28■□□□□ 0.2
SHKBP1-216ENST00000598201 MFSD2AQ8NA29 543 aa16.28■□□□□ 0.2
SHKBP1-216ENST00000598201 ZFP90Q8TF47 636 aa16.28■□□□□ 0.2
SHKBP1-216ENST00000598201 RAB11FIP5Q9BXF6 653 aa16.28■□□□□ 0.2
SHKBP1-216ENST00000598201 C6orf106Q9H6K1 298 aaPredicted RBP16.28■□□□□ 0.2
SHKBP1-216ENST00000598201 USP36Q9P275 1121 aaKnown RBP16.28■□□□□ 0.2
SHKBP1-216ENST00000598201 ZNF639Q9UID6 485 aa16.28■□□□□ 0.2
SHKBP1-216ENST00000598201 PRSS23O95084 383 aa16.27■□□□□ 0.2
SHKBP1-216ENST00000598201 NTRK1P04629 796 aa16.27■□□□□ 0.2
SHKBP1-216ENST00000598201 DCNP07585 359 aaKnown RBP16.27■□□□□ 0.2
SHKBP1-216ENST00000598201 MYBPC1Q00872 1141 aa16.27■□□□□ 0.2
SHKBP1-216ENST00000598201 VMACQ2NL98 169 aa16.27■□□□□ 0.2
SHKBP1-216ENST00000598201 CPZQ66K79 652 aa16.27■□□□□ 0.2
SHKBP1-216ENST00000598201 CWF19L1Q69YN2 538 aaKnown RBP16.27■□□□□ 0.2
SHKBP1-216ENST00000598201 TMEM214Q6NUQ4 689 aaKnown RBP16.27■□□□□ 0.2
SHKBP1-216ENST00000598201 FAM180BQ6P0A1 224 aa16.27■□□□□ 0.2
SHKBP1-216ENST00000598201 SLC30A9Q6PML9 568 aa16.27■□□□□ 0.2
SHKBP1-216ENST00000598201 R3HCC1LQ7Z5L2 792 aaKnown RBP16.27■□□□□ 0.2
SHKBP1-216ENST00000598201 UBE3DQ7Z6J8 389 aa16.27■□□□□ 0.2
SHKBP1-216ENST00000598201 GALNT10Q86SR1 603 aa16.27■□□□□ 0.2
SHKBP1-216ENST00000598201 PGBD3Q8N328 593 aa16.27■□□□□ 0.2
SHKBP1-216ENST00000598201 FBXL6Q8N531 539 aa16.27■□□□□ 0.2
SHKBP1-216ENST00000598201 CREB3L4Q8TEY5 395 aa16.27■□□□□ 0.2
SHKBP1-216ENST00000598201 CLDN23Q96B33 292 aa16.27■□□□□ 0.2
SHKBP1-216ENST00000598201 BDH2Q9BUT1 245 aa16.27■□□□□ 0.2
SHKBP1-216ENST00000598201 PITHD1Q9GZP4 211 aaPredicted RBP16.27■□□□□ 0.2
SHKBP1-216ENST00000598201 AICDAQ9GZX7 198 aa16.27■□□□□ 0.2
SHKBP1-216ENST00000598201 CHST8Q9H2A9 424 aa16.27■□□□□ 0.2
SHKBP1-216ENST00000598201 ATAD3AQ9NVI7 634 aa16.27■□□□□ 0.2
SHKBP1-216ENST00000598201 AHSPQ9NZD4 102 aa16.27■□□□□ 0.2
SHKBP1-216ENST00000598201 ZNF624Q9P2J8 865 aaPredicted RBP16.27■□□□□ 0.2
SHKBP1-216ENST00000598201 VPS4AQ9UN37 437 aa16.27■□□□□ 0.2
SHKBP1-216ENST00000598201 TRBV23OR9-2A0A075B6M9 112 aa16.26■□□□□ 0.19
SHKBP1-216ENST00000598201 PPM1DO15297 605 aa16.26■□□□□ 0.19
SHKBP1-216ENST00000598201 STATHP02808 62 aa16.26■□□□□ 0.19
SHKBP1-216ENST00000598201 ZNF23P17027 643 aa16.26■□□□□ 0.19
SHKBP1-216ENST00000598201 HTR1BP28222 390 aa16.26■□□□□ 0.19
SHKBP1-216ENST00000598201 ALG11Q2TAA5 492 aa16.26■□□□□ 0.19
SHKBP1-216ENST00000598201 CARM1Q86X55 608 aa16.26■□□□□ 0.19
SHKBP1-216ENST00000598201 AMER3Q8N944 861 aa16.26■□□□□ 0.19
SHKBP1-216ENST00000598201 TMEM145Q8NBT3 493 aa16.26■□□□□ 0.19
SHKBP1-216ENST00000598201 GOT1L1Q8NHS2 421 aaPredicted RBP16.26■□□□□ 0.19
SHKBP1-216ENST00000598201 TM4SF18Q96CE8 201 aa16.26■□□□□ 0.19
SHKBP1-216ENST00000598201 ABCG4Q9H172 646 aa16.26■□□□□ 0.19
SHKBP1-216ENST00000598201 KIR3DX1Q9H7L2 352 aa16.26■□□□□ 0.19
SHKBP1-216ENST00000598201 MRPS30Q9NP92 439 aaKnown RBP16.26■□□□□ 0.19
SHKBP1-216ENST00000598201 OLAHQ9NV23 265 aa16.26■□□□□ 0.19
SHKBP1-216ENST00000598201 TAAR2Q9P1P5 351 aa16.26■□□□□ 0.19
SHKBP1-216ENST00000598201 MAGED1Q9Y5V3 778 aaPredicted RBP16.26■□□□□ 0.19
SHKBP1-216ENST00000598201 MYOCOSA0A1B0GUC4 107 aa16.26■□□□□ 0.19
SHKBP1-216ENST00000598201 GPR37L1O60883 481 aa16.26■□□□□ 0.19
SHKBP1-216ENST00000598201 DEAF1O75398 565 aaPredicted RBP16.26■□□□□ 0.19
SHKBP1-216ENST00000598201 RASGRP1O95267 797 aa16.26■□□□□ 0.19
SHKBP1-216ENST00000598201 IGHV4-34P06331 123 aa16.26■□□□□ 0.19
SHKBP1-216ENST00000598201 SERPINB1P30740 379 aa16.26■□□□□ 0.19
SHKBP1-216ENST00000598201 AKT2P31751 481 aa16.26■□□□□ 0.19
SHKBP1-216ENST00000598201 BCL6P41182 706 aa16.26■□□□□ 0.19
SHKBP1-216ENST00000598201 ACTR1BP42025 376 aa16.26■□□□□ 0.19
SHKBP1-216ENST00000598201 RPS9P46781 194 aaKnown RBP16.26■□□□□ 0.19
SHKBP1-216ENST00000598201 ACTR1AP61163 376 aa16.26■□□□□ 0.19
SHKBP1-216ENST00000598201 TXNL4AP83876 142 aaKnown RBP16.26■□□□□ 0.19
SHKBP1-216ENST00000598201 RGNQ15493 299 aa16.26■□□□□ 0.19
SHKBP1-216ENST00000598201 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms