RNA–Protein interactions for RNA: ENST00000596708.1

CHMP2A-202, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-202ENST00000596708 SLC5A11Q8WWX8 675 aa9.89□□□□□ -0.83
CHMP2A-202ENST00000596708 ATL1Q8WXF7 558 aa9.89□□□□□ -0.83
CHMP2A-202ENST00000596708 C14orf79Q96F83 325 aa9.89□□□□□ -0.83
CHMP2A-202ENST00000596708 MS4A14Q96JA4 679 aa9.89□□□□□ -0.83
CHMP2A-202ENST00000596708 OLFM1Q99784 485 aa9.89□□□□□ -0.83
CHMP2A-202ENST00000596708 SPOCK3Q9BQ16 436 aa9.89□□□□□ -0.83
CHMP2A-202ENST00000596708 SARGQ9BW04 601 aa9.89□□□□□ -0.83
CHMP2A-202ENST00000596708 ZFP69BQ9UJL9 534 aa9.89□□□□□ -0.83
CHMP2A-202ENST00000596708 KLF13Q9Y2Y9 288 aaPredicted RBP9.89□□□□□ -0.83
CHMP2A-202ENST00000596708 DYRK1BQ9Y463 629 aa9.89□□□□□ -0.83
CHMP2A-202ENST00000596708 ASB1Q9Y576 335 aa9.89□□□□□ -0.83
CHMP2A-202ENST00000596708 MPDZO75970 2070 aa9.89□□□□□ -0.83
CHMP2A-202ENST00000596708 CSMD2Q7Z408 3487 aa9.88□□□□□ -0.83
CHMP2A-202ENST00000596708 PDZD2O15018 2839 aa9.88□□□□□ -0.83
CHMP2A-202ENST00000596708 AHSGP02765 367 aa9.88□□□□□ -0.83
CHMP2A-202ENST00000596708 RNH1P13489 461 aaKnown RBP9.88□□□□□ -0.83
CHMP2A-202ENST00000596708 PGAM1P18669 254 aa9.88□□□□□ -0.83
CHMP2A-202ENST00000596708 MAOAP21397 527 aa9.88□□□□□ -0.83
CHMP2A-202ENST00000596708 GABRB3P28472 473 aa9.88□□□□□ -0.83
CHMP2A-202ENST00000596708 PTGER1P34995 402 aa9.88□□□□□ -0.83
CHMP2A-202ENST00000596708 PTGS2P35354 604 aa9.88□□□□□ -0.83
CHMP2A-202ENST00000596708 RFC3P40938 356 aa9.88□□□□□ -0.83
CHMP2A-202ENST00000596708 SCTRP47872 440 aa9.88□□□□□ -0.83
CHMP2A-202ENST00000596708 HLCSP50747 726 aa9.88□□□□□ -0.83
CHMP2A-202ENST00000596708 CLCN2P51788 898 aa9.88□□□□□ -0.83
CHMP2A-202ENST00000596708 PGGT1BP53609 377 aa9.88□□□□□ -0.83
CHMP2A-202ENST00000596708 CDKN2DP55273 166 aa9.88□□□□□ -0.83
CHMP2A-202ENST00000596708 AP1S2P56377 157 aa9.88□□□□□ -0.83
CHMP2A-202ENST00000596708 CRYMQ14894 314 aa9.88□□□□□ -0.83
CHMP2A-202ENST00000596708 CEP128Q6ZU80 1094 aa9.88□□□□□ -0.83
CHMP2A-202ENST00000596708 CD163Q86VB7 1156 aa9.88□□□□□ -0.83
CHMP2A-202ENST00000596708 ZNF227Q86WZ6 799 aa9.88□□□□□ -0.83
CHMP2A-202ENST00000596708 SULF2Q8IWU5 870 aa9.88□□□□□ -0.83
CHMP2A-202ENST00000596708 RASGEF1CQ8N431 466 aa9.88□□□□□ -0.83
CHMP2A-202ENST00000596708 TMEM156Q8N614 296 aa9.88□□□□□ -0.83
CHMP2A-202ENST00000596708 GPATCH11Q8N954 259 aa9.88□□□□□ -0.83
CHMP2A-202ENST00000596708 POGLUT1Q8NBL1 392 aa9.88□□□□□ -0.83
CHMP2A-202ENST00000596708 NT5CQ8TCD5 201 aa9.88□□□□□ -0.83
CHMP2A-202ENST00000596708 GRK7Q8WTQ7 553 aa9.88□□□□□ -0.83
CHMP2A-202ENST00000596708 NEIL2Q969S2 332 aa9.88□□□□□ -0.83
CHMP2A-202ENST00000596708 FBXL8Q96CD0 374 aa9.88□□□□□ -0.83
CHMP2A-202ENST00000596708 PBKQ96KB5 322 aa9.88□□□□□ -0.83
CHMP2A-202ENST00000596708 TSNARE1Q96NA8 513 aa9.88□□□□□ -0.83
CHMP2A-202ENST00000596708 OR4K3Q96R72 315 aa9.88□□□□□ -0.83
CHMP2A-202ENST00000596708 DMRTA2Q96SC8 542 aa9.88□□□□□ -0.83
CHMP2A-202ENST00000596708 ENKD1Q9H0I2 346 aa9.88□□□□□ -0.83
CHMP2A-202ENST00000596708 SPNS1Q9H2V7 528 aa9.88□□□□□ -0.83
CHMP2A-202ENST00000596708 KLHL31Q9H511 634 aa9.88□□□□□ -0.83
CHMP2A-202ENST00000596708 PPANQ9NQ55 473 aaKnown RBP9.88□□□□□ -0.83
CHMP2A-202ENST00000596708 NECTIN3Q9NQS3 549 aa9.88□□□□□ -0.83
CHMP2A-202ENST00000596708 PRDM9Q9NQV7 894 aa9.88□□□□□ -0.83
CHMP2A-202ENST00000596708 FBXW2Q9UKT8 454 aa9.88□□□□□ -0.83
CHMP2A-202ENST00000596708 ANKRD17O75179 2603 aaKnown RBP9.87□□□□□ -0.83
CHMP2A-202ENST00000596708 TRBV11-1A0A0K0K1C0 115 aa9.87□□□□□ -0.83
CHMP2A-202ENST00000596708 TCRBV16S1A1N1A0A5B0 115 aa9.87□□□□□ -0.83
CHMP2A-202ENST00000596708 ADAM10O14672 748 aa9.87□□□□□ -0.83
CHMP2A-202ENST00000596708 PEX1O43933 1283 aa9.87□□□□□ -0.83
CHMP2A-202ENST00000596708 HS6ST1O60243 411 aa9.87□□□□□ -0.83
CHMP2A-202ENST00000596708 BANF1O75531 89 aa9.87□□□□□ -0.83
CHMP2A-202ENST00000596708 TTC4O95801 387 aa9.87□□□□□ -0.83
CHMP2A-202ENST00000596708 TFEBP19484 476 aa9.87□□□□□ -0.83
CHMP2A-202ENST00000596708 TRHRP34981 398 aaPredicted RBP9.87□□□□□ -0.83
CHMP2A-202ENST00000596708 AHRP35869 848 aa9.87□□□□□ -0.83
CHMP2A-202ENST00000596708 PPP1R7Q15435 360 aa9.87□□□□□ -0.83
CHMP2A-202ENST00000596708 TOR1AIP1Q5JTV8 583 aa9.87□□□□□ -0.83
CHMP2A-202ENST00000596708 SPANXN3Q5MJ09 141 aa9.87□□□□□ -0.83
CHMP2A-202ENST00000596708 HECTD2Q5U5R9 776 aa9.87□□□□□ -0.83
CHMP2A-202ENST00000596708 TMEM211Q6ICI0 200 aa9.87□□□□□ -0.83
CHMP2A-202ENST00000596708 FGD2Q7Z6J4 655 aa9.87□□□□□ -0.83
CHMP2A-202ENST00000596708 STRA8Q7Z7C7 330 aa9.87□□□□□ -0.83
CHMP2A-202ENST00000596708 TMPRSS11BQ86T26 416 aa9.87□□□□□ -0.83
CHMP2A-202ENST00000596708 CDH24Q86UP0 819 aa9.87□□□□□ -0.83
CHMP2A-202ENST00000596708 CHERPQ8IWX8 916 aaKnown RBP9.87□□□□□ -0.83
CHMP2A-202ENST00000596708 NFAM1Q8NET5 270 aaPredicted RBP9.87□□□□□ -0.83
CHMP2A-202ENST00000596708 TRPV3Q8NET8 790 aa9.87□□□□□ -0.83
CHMP2A-202ENST00000596708 FAM57AQ8TBR7 257 aa9.87□□□□□ -0.83
CHMP2A-202ENST00000596708 NAP1L3Q99457 506 aaPredicted RBP9.87□□□□□ -0.83
CHMP2A-202ENST00000596708 AIF1LQ9BQI0 150 aa9.87□□□□□ -0.83
CHMP2A-202ENST00000596708 TRIM45Q9H8W5 580 aaPredicted RBP9.87□□□□□ -0.83
CHMP2A-202ENST00000596708 PELI2Q9HAT8 420 aa9.87□□□□□ -0.83
CHMP2A-202ENST00000596708 CLK4Q9HAZ1 481 aaKnown RBP9.87□□□□□ -0.83
CHMP2A-202ENST00000596708 MCCC2Q9HCC0 563 aa9.87□□□□□ -0.83
CHMP2A-202ENST00000596708 PNO1Q9NRX1 252 aaKnown RBP9.87□□□□□ -0.83
CHMP2A-202ENST00000596708 ZFATQ9P243 1243 aa9.87□□□□□ -0.83
CHMP2A-202ENST00000596708 VWA7Q9Y334 891 aa9.87□□□□□ -0.83
CHMP2A-202ENST00000596708 NEU2Q9Y3R4 380 aa9.87□□□□□ -0.83
CHMP2A-202ENST00000596708 NCKAP5O14513 1909 aa9.87□□□□□ -0.83
CHMP2A-202ENST00000596708 USP27XA6NNY8 438 aa9.86□□□□□ -0.83
CHMP2A-202ENST00000596708 FANCGO15287 622 aa9.86□□□□□ -0.83
CHMP2A-202ENST00000596708 ITGA10O75578 1167 aa9.86□□□□□ -0.83
CHMP2A-202ENST00000596708 PDE9AO76083 593 aa9.86□□□□□ -0.83
CHMP2A-202ENST00000596708 MYO1DO94832 1006 aa9.86□□□□□ -0.83
CHMP2A-202ENST00000596708 ENO2P09104 434 aaPredicted RBP9.86□□□□□ -0.83
CHMP2A-202ENST00000596708 SAT1P21673 171 aa9.86□□□□□ -0.83
CHMP2A-202ENST00000596708 GPR85P60893 370 aa9.86□□□□□ -0.83
CHMP2A-202ENST00000596708 BTN3A2P78410 334 aa9.86□□□□□ -0.83
CHMP2A-202ENST00000596708 REEP5Q00765 189 aa9.86□□□□□ -0.83
CHMP2A-202ENST00000596708 CYP1B1Q16678 543 aa9.86□□□□□ -0.83
CHMP2A-202ENST00000596708 BBS9Q3SYG4 887 aa9.86□□□□□ -0.83
CHMP2A-202ENST00000596708 RNASEH2BQ5TBB1 312 aaKnown RBP9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms