RNA–Protein interactions for RNA: ENST00000596457.1

LIG1-211, Transcript of DNA ligase 1, humanhuman

TSL 5

Gene LIG1, Length 792 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-211ENST00000596457 OR7A17O14581 309 aa10.49□□□□□ -0.73
LIG1-211ENST00000596457 ERI3O43414 337 aaKnown RBP10.49□□□□□ -0.73
LIG1-211ENST00000596457 CHST10O43529 356 aa10.49□□□□□ -0.73
LIG1-211ENST00000596457 GALR3O60755 368 aaPredicted RBP10.49□□□□□ -0.73
LIG1-211ENST00000596457 ALOX12BO75342 701 aa10.49□□□□□ -0.73
LIG1-211ENST00000596457 ERLIN1O75477 346 aa10.49□□□□□ -0.73
LIG1-211ENST00000596457 JRKO75564 520 aa10.49□□□□□ -0.73
LIG1-211ENST00000596457 CLEC3AO75596 197 aa10.49□□□□□ -0.73
LIG1-211ENST00000596457 CDC123O75794 336 aaPredicted RBP10.49□□□□□ -0.73
LIG1-211ENST00000596457 DNAJB5O75953 348 aa10.49□□□□□ -0.73
LIG1-211ENST00000596457 WFS1O76024 890 aa10.49□□□□□ -0.73
LIG1-211ENST00000596457 CLDN9O95484 217 aa10.49□□□□□ -0.73
LIG1-211ENST00000596457 ONECUT2O95948 504 aa10.49□□□□□ -0.73
LIG1-211ENST00000596457 RECKO95980 971 aa10.49□□□□□ -0.73
LIG1-211ENST00000596457 MYL2P10916 166 aa10.49□□□□□ -0.73
LIG1-211ENST00000596457 ATP5F1P24539 256 aaPredicted RBP10.49□□□□□ -0.73
LIG1-211ENST00000596457 HNRNPH1P31943 449 aaKnown RBP10.49□□□□□ -0.73
LIG1-211ENST00000596457 CASP2P42575 452 aa10.49□□□□□ -0.73
LIG1-211ENST00000596457 XCR1P46094 333 aa10.49□□□□□ -0.73
LIG1-211ENST00000596457 POLE2P56282 527 aa10.49□□□□□ -0.73
LIG1-211ENST00000596457 SRSF1Q07955 248 aaKnown RBP eCLIP10.49□□□□□ -0.73
LIG1-211ENST00000596457 TBCCQ15814 346 aa10.49□□□□□ -0.73
LIG1-211ENST00000596457 MINDY4Q4G0A6 757 aa10.49□□□□□ -0.73
LIG1-211ENST00000596457 SGO1Q5FBB7 561 aa10.49□□□□□ -0.73
LIG1-211ENST00000596457 LIPJQ5W064 366 aa10.49□□□□□ -0.73
LIG1-211ENST00000596457 VN1R5Q7Z5H4 357 aa10.49□□□□□ -0.73
LIG1-211ENST00000596457 MILR1Q7Z6M3 343 aa10.49□□□□□ -0.73
LIG1-211ENST00000596457 LCA5Q86VQ0 697 aa10.49□□□□□ -0.73
LIG1-211ENST00000596457 RIBC1Q8N443 379 aaPredicted RBP10.49□□□□□ -0.73
LIG1-211ENST00000596457 CCNYL1Q8N7R7 359 aa10.49□□□□□ -0.73
LIG1-211ENST00000596457 EXD3Q8N9H8 876 aa10.49□□□□□ -0.73
LIG1-211ENST00000596457 OR52B6Q8NGF0 335 aa10.49□□□□□ -0.73
LIG1-211ENST00000596457 ADAMTS17Q8TE56 1095 aa10.49□□□□□ -0.73
LIG1-211ENST00000596457 TRPC4APQ8TEL6 797 aa10.49□□□□□ -0.73
LIG1-211ENST00000596457 MTERF1Q99551 399 aaKnown RBP10.49□□□□□ -0.73
LIG1-211ENST00000596457 TRIM55Q9BYV6 548 aa10.49□□□□□ -0.73
LIG1-211ENST00000596457 FAM117AQ9C073 453 aa10.49□□□□□ -0.73
LIG1-211ENST00000596457 PITHD1Q9GZP4 211 aaPredicted RBP10.49□□□□□ -0.73
LIG1-211ENST00000596457 REXO4Q9GZR2 422 aaKnown RBP10.49□□□□□ -0.73
LIG1-211ENST00000596457 AICDAQ9GZX7 198 aa10.49□□□□□ -0.73
LIG1-211ENST00000596457 IQCGQ9H095 443 aaKnown RBP10.49□□□□□ -0.73
LIG1-211ENST00000596457 SLC26A1Q9H2B4 701 aa10.49□□□□□ -0.73
LIG1-211ENST00000596457 ADNPQ9H2P0 1102 aa10.49□□□□□ -0.73
LIG1-211ENST00000596457 COPS7BQ9H9Q2 264 aaPredicted RBP10.49□□□□□ -0.73
LIG1-211ENST00000596457 EMCNQ9ULC0 261 aa10.49□□□□□ -0.73
LIG1-211ENST00000596457 MKL2Q9ULH7 1088 aa10.49□□□□□ -0.73
LIG1-211ENST00000596457 COL6A6A6NMZ7 2263 aa10.49□□□□□ -0.73
LIG1-211ENST00000596457 NUP210LQ5VU65 1888 aa10.49□□□□□ -0.73
LIG1-211ENST00000596457 LRIT2A6NDA9 550 aa10.48□□□□□ -0.73
LIG1-211ENST00000596457 IDSB3KWA1 339 aa10.48□□□□□ -0.73
LIG1-211ENST00000596457 PPP6CO00743 305 aa10.48□□□□□ -0.73
LIG1-211ENST00000596457 RGS16O15492 202 aaPredicted RBP10.48□□□□□ -0.73
LIG1-211ENST00000596457 B4GALT2O60909 372 aa10.48□□□□□ -0.73
LIG1-211ENST00000596457 BMP10O95393 424 aa10.48□□□□□ -0.73
LIG1-211ENST00000596457 IGHEP01854 428 aa10.48□□□□□ -0.73
LIG1-211ENST00000596457 PROCP04070 461 aa10.48□□□□□ -0.73
LIG1-211ENST00000596457 RPS17P08708 135 aaKnown RBP10.48□□□□□ -0.73
LIG1-211ENST00000596457 CRHR1P34998 444 aa10.48□□□□□ -0.73
LIG1-211ENST00000596457 NEK2P51955 445 aa10.48□□□□□ -0.73
LIG1-211ENST00000596457 SKP1P63208 163 aa10.48□□□□□ -0.73
LIG1-211ENST00000596457 PHEXP78562 749 aa10.48□□□□□ -0.73
LIG1-211ENST00000596457 EEF1A2Q05639 463 aaKnown RBP10.48□□□□□ -0.73
LIG1-211ENST00000596457 SLC18A2Q05940 514 aa10.48□□□□□ -0.73
LIG1-211ENST00000596457 RAPSNQ13702 412 aa10.48□□□□□ -0.73
LIG1-211ENST00000596457 RASA2Q15283 850 aa10.48□□□□□ -0.73
LIG1-211ENST00000596457 ZRSR2Q15696 482 aaKnown RBP10.48□□□□□ -0.73
LIG1-211ENST00000596457 CCDC153Q494R4 210 aa10.48□□□□□ -0.73
LIG1-211ENST00000596457 UNC50Q53HI1 259 aa10.48□□□□□ -0.73
LIG1-211ENST00000596457 ZNF678Q5SXM1 525 aa10.48□□□□□ -0.73
LIG1-211ENST00000596457 CEP85LQ5SZL2 805 aa10.48□□□□□ -0.73
LIG1-211ENST00000596457 FAM219BQ5XKK7 198 aa10.48□□□□□ -0.73
LIG1-211ENST00000596457 TRIM40Q6P9F5 258 aa10.48□□□□□ -0.73
LIG1-211ENST00000596457 SH2D5Q6ZV89 423 aa10.48□□□□□ -0.73
LIG1-211ENST00000596457 PPP1R32Q7Z5V6 425 aa10.48□□□□□ -0.73
LIG1-211ENST00000596457 MRGPREQ86SM8 312 aa10.48□□□□□ -0.73
LIG1-211ENST00000596457 TRABD2AQ86V40 505 aa10.48□□□□□ -0.73
LIG1-211ENST00000596457 SLC22A9Q8IVM8 553 aa10.48□□□□□ -0.73
LIG1-211ENST00000596457 ZC3H7AQ8IWR0 971 aaKnown RBP10.48□□□□□ -0.73
LIG1-211ENST00000596457 LAS2Q8IYD9 372 aa10.48□□□□□ -0.73
LIG1-211ENST00000596457 OR7G3Q8NG95 312 aa10.48□□□□□ -0.73
LIG1-211ENST00000596457 OR4F6Q8NGB9 312 aa10.48□□□□□ -0.73
LIG1-211ENST00000596457 ZNF483Q8TF39 744 aaPredicted RBP10.48□□□□□ -0.73
LIG1-211ENST00000596457 ZNF473Q8WTR7 871 aaKnown RBP10.48□□□□□ -0.73
LIG1-211ENST00000596457 GAL3ST3Q96A11 431 aa10.48□□□□□ -0.73
LIG1-211ENST00000596457 C8orf44Q96CB5 159 aa10.48□□□□□ -0.73
LIG1-211ENST00000596457 MS4A6EQ96DS6 147 aa10.48□□□□□ -0.73
LIG1-211ENST00000596457 ZIM3Q96PE6 472 aa10.48□□□□□ -0.73
LIG1-211ENST00000596457 TMEM237Q96Q45 408 aa10.48□□□□□ -0.73
LIG1-211ENST00000596457 MESP1Q9BRJ9 268 aa10.48□□□□□ -0.73
LIG1-211ENST00000596457 ING2Q9H160 280 aa10.48□□□□□ -0.73
LIG1-211ENST00000596457 OR51B5Q9H339 312 aa10.48□□□□□ -0.73
LIG1-211ENST00000596457 ZBTB26Q9HCK0 441 aa10.48□□□□□ -0.73
LIG1-211ENST00000596457 SEMA3GQ9NS98 782 aa10.48□□□□□ -0.73
LIG1-211ENST00000596457 C14orf105Q9NVL8 296 aa10.48□□□□□ -0.73
LIG1-211ENST00000596457 P4HTMQ9NXG6 502 aa10.48□□□□□ -0.73
LIG1-211ENST00000596457 LGALS13Q9UHV8 139 aa10.48□□□□□ -0.73
LIG1-211ENST00000596457 PCDHGA11Q9Y5H2 935 aa10.48□□□□□ -0.73
LIG1-211ENST00000596457 TNRC6AQ8NDV7 1962 aaKnown RBP10.47□□□□□ -0.73
LIG1-211ENST00000596457 IGLV3-12A0A075B6K2 115 aa10.47□□□□□ -0.73
LIG1-211ENST00000596457 FAM227AF5H4B4 570 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms