RNA–Protein interactions for RNA: ENST00000596304.5

UBA52-208, Transcript of ubiquitin A-52 residue ribosomal protein fusion product 1, human

APPRIS P1 TSL 5 BASIC

Gene UBA52, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBA52-208	ENST00000596304	ABHD13	Q7L211	337 aa		12.84	□□□□□ -0.35
UBA52-208	ENST00000596304	CEP97	Q8IW35	865 aa		12.84	□□□□□ -0.35
UBA52-208	ENST00000596304	LRRC8A	Q8IWT6	810 aa		12.84	□□□□□ -0.35
UBA52-208	ENST00000596304	CNTN4	Q8IWV2	1026 aa		12.84	□□□□□ -0.35
UBA52-208	ENST00000596304	GPATCH11	Q8N954	259 aa		12.84	□□□□□ -0.35
UBA52-208	ENST00000596304	ANKRD53	Q8N9V6	530 aa		12.84	□□□□□ -0.35
UBA52-208	ENST00000596304	NFAM1	Q8NET5	270 aa	Predicted RBP	12.84	□□□□□ -0.35
UBA52-208	ENST00000596304	PHF10	Q8WUB8	498 aa	Known RBP	12.84	□□□□□ -0.35
UBA52-208	ENST00000596304	SLC5A11	Q8WWX8	675 aa		12.84	□□□□□ -0.35
UBA52-208	ENST00000596304	PBK	Q96KB5	322 aa		12.84	□□□□□ -0.35
UBA52-208	ENST00000596304	RHBG	Q9H310	441 aa		12.84	□□□□□ -0.35
UBA52-208	ENST00000596304	KLHL31	Q9H511	634 aa		12.84	□□□□□ -0.35
UBA52-208	ENST00000596304	TRIM45	Q9H8W5	580 aa	Predicted RBP	12.84	□□□□□ -0.35
UBA52-208	ENST00000596304	PPP2R2C	Q9Y2T4	447 aa		12.84	□□□□□ -0.35
UBA52-208	ENST00000596304	POLQ	O75417	2590 aa		12.84	□□□□□ -0.35
UBA52-208	ENST00000596304	AKAP9	Q99996	3911 aa		12.83	□□□□□ -0.35
UBA52-208	ENST00000596304	DCHS2	Q6V1P9	2916 aa		12.83	□□□□□ -0.36
UBA52-208	ENST00000596304	IGKV3D-11	A0A0A0MRZ8	115 aa		12.83	□□□□□ -0.36
UBA52-208	ENST00000596304	TCRBV16S1A1N1	A0A5B0	115 aa		12.83	□□□□□ -0.36
UBA52-208	ENST00000596304	PABPN1L	A6NDY0	278 aa	Known RBP	12.83	□□□□□ -0.36
UBA52-208	ENST00000596304		E9PLN8	166 aa		12.83	□□□□□ -0.36
UBA52-208	ENST00000596304	PRRG2	O14669	202 aa		12.83	□□□□□ -0.36
UBA52-208	ENST00000596304	NRDC	O43847	1150 aa		12.83	□□□□□ -0.36
UBA52-208	ENST00000596304	SMIM10L1	P0DMW3	83 aa		12.83	□□□□□ -0.36
UBA52-208	ENST00000596304	SSTR2	P30874	369 aa		12.83	□□□□□ -0.36
UBA52-208	ENST00000596304	AHR	P35869	848 aa		12.83	□□□□□ -0.36
UBA52-208	ENST00000596304	RFC3	P40938	356 aa		12.83	□□□□□ -0.36
UBA52-208	ENST00000596304	AP1S2	P56377	157 aa		12.83	□□□□□ -0.36
UBA52-208	ENST00000596304	IL2	P60568	153 aa		12.83	□□□□□ -0.36
UBA52-208	ENST00000596304	SKP1	P63208	163 aa		12.83	□□□□□ -0.36
UBA52-208	ENST00000596304	CSHL1	Q14406	222 aa		12.83	□□□□□ -0.36
UBA52-208	ENST00000596304	SPANXN3	Q5MJ09	141 aa		12.83	□□□□□ -0.36
UBA52-208	ENST00000596304	HECTD2	Q5U5R9	776 aa		12.83	□□□□□ -0.36
UBA52-208	ENST00000596304	NIPAL1	Q6NVV3	410 aa		12.83	□□□□□ -0.36
UBA52-208	ENST00000596304	STRA8	Q7Z7C7	330 aa		12.83	□□□□□ -0.36
UBA52-208	ENST00000596304	IGDCC3	Q8IVU1	814 aa		12.83	□□□□□ -0.36
UBA52-208	ENST00000596304	CA13	Q8N1Q1	262 aa		12.83	□□□□□ -0.36
UBA52-208	ENST00000596304	TBC1D19	Q8N5T2	526 aa		12.83	□□□□□ -0.36
UBA52-208	ENST00000596304	SDCCAG3	Q96C92	435 aa		12.83	□□□□□ -0.36
UBA52-208	ENST00000596304	CERS2	Q96G23	380 aa		12.83	□□□□□ -0.36
UBA52-208	ENST00000596304	SMIM10	Q96HG1	83 aa		12.83	□□□□□ -0.36
UBA52-208	ENST00000596304	OLFM1	Q99784	485 aa		12.83	□□□□□ -0.36
UBA52-208	ENST00000596304	VKORC1	Q9BQB6	163 aa		12.83	□□□□□ -0.36
UBA52-208	ENST00000596304	TRIM54	Q9BYV2	358 aa		12.83	□□□□□ -0.36
UBA52-208	ENST00000596304	SLC6A16	Q9GZN6	736 aa		12.83	□□□□□ -0.36
UBA52-208	ENST00000596304	AICDA	Q9GZX7	198 aa		12.83	□□□□□ -0.36
UBA52-208	ENST00000596304	PLAC1	Q9HBJ0	212 aa		12.83	□□□□□ -0.36
UBA52-208	ENST00000596304		A0A1B0GTH9	108 aa		12.82	□□□□□ -0.36
UBA52-208	ENST00000596304	PGRMC1	O00264	195 aa	Known RBP	12.82	□□□□□ -0.36
UBA52-208	ENST00000596304	CDK2AP1	O14519	115 aa		12.82	□□□□□ -0.36
UBA52-208	ENST00000596304	FCHO1	O14526	889 aa		12.82	□□□□□ -0.36
UBA52-208	ENST00000596304	DNALI1	O14645	258 aa	Predicted RBP	12.82	□□□□□ -0.36
UBA52-208	ENST00000596304	HS6ST1	O60243	411 aa		12.82	□□□□□ -0.36
UBA52-208	ENST00000596304	RNH1	P13489	461 aa	Known RBP	12.82	□□□□□ -0.36
UBA52-208	ENST00000596304	TRHR	P34981	398 aa	Predicted RBP	12.82	□□□□□ -0.36
UBA52-208	ENST00000596304	FNTA	P49354	379 aa		12.82	□□□□□ -0.36
UBA52-208	ENST00000596304	HLCS	P50747	726 aa		12.82	□□□□□ -0.36
UBA52-208	ENST00000596304	RBBP5	Q15291	538 aa	Known RBP	12.82	□□□□□ -0.36
UBA52-208	ENST00000596304	BBS9	Q3SYG4	887 aa		12.82	□□□□□ -0.36
UBA52-208	ENST00000596304	TOR1AIP1	Q5JTV8	583 aa		12.82	□□□□□ -0.36
UBA52-208	ENST00000596304	TEDDM1	Q5T9Z0	273 aa		12.82	□□□□□ -0.36
UBA52-208	ENST00000596304	SBSN	Q6UWP8	590 aa		12.82	□□□□□ -0.36
UBA52-208	ENST00000596304	KIAA0408	Q6ZU52	694 aa		12.82	□□□□□ -0.36
UBA52-208	ENST00000596304	TMPRSS11B	Q86T26	416 aa		12.82	□□□□□ -0.36
UBA52-208	ENST00000596304	CD163	Q86VB7	1156 aa		12.82	□□□□□ -0.36
UBA52-208	ENST00000596304	THOC6	Q86W42	341 aa	Known RBP	12.82	□□□□□ -0.36
UBA52-208	ENST00000596304	SULF2	Q8IWU5	870 aa		12.82	□□□□□ -0.36
UBA52-208	ENST00000596304	APCDD1L	Q8NCL9	501 aa		12.82	□□□□□ -0.36
UBA52-208	ENST00000596304	GABPB2	Q8TAK5	448 aa	Predicted RBP	12.82	□□□□□ -0.36
UBA52-208	ENST00000596304	GRK7	Q8WTQ7	553 aa		12.82	□□□□□ -0.36
UBA52-208	ENST00000596304	ATL1	Q8WXF7	558 aa		12.82	□□□□□ -0.36
UBA52-208	ENST00000596304	TMEM125	Q96AQ2	219 aa		12.82	□□□□□ -0.36
UBA52-208	ENST00000596304	C14orf79	Q96F83	325 aa		12.82	□□□□□ -0.36
UBA52-208	ENST00000596304	DEFB126	Q9BYW3	111 aa		12.82	□□□□□ -0.36
UBA52-208	ENST00000596304	ENKD1	Q9H0I2	346 aa		12.82	□□□□□ -0.36
UBA52-208	ENST00000596304	PELI2	Q9HAT8	420 aa		12.82	□□□□□ -0.36
UBA52-208	ENST00000596304	PRDM9	Q9NQV7	894 aa		12.82	□□□□□ -0.36
UBA52-208	ENST00000596304	ZFAT	Q9P243	1243 aa		12.82	□□□□□ -0.36
UBA52-208	ENST00000596304	ZNF223	Q9UK11	482 aa	Predicted RBP	12.82	□□□□□ -0.36
UBA52-208	ENST00000596304	PPT2	Q9UMR5	302 aa		12.82	□□□□□ -0.36
UBA52-208	ENST00000596304	KLF13	Q9Y2Y9	288 aa	Predicted RBP	12.82	□□□□□ -0.36
UBA52-208	ENST00000596304	DYRK1B	Q9Y463	629 aa		12.82	□□□□□ -0.36
UBA52-208	ENST00000596304	JRKL	Q9Y4A0	524 aa		12.82	□□□□□ -0.36
UBA52-208	ENST00000596304	HRH3	Q9Y5N1	445 aa		12.82	□□□□□ -0.36
UBA52-208	ENST00000596304	ADGRG4	Q8IZF6	3080 aa		12.82	□□□□□ -0.36
UBA52-208	ENST00000596304	TRBV11-1	A0A0K0K1C0	115 aa		12.81	□□□□□ -0.36
UBA52-208	ENST00000596304	URAD	A6NGE7	173 aa		12.81	□□□□□ -0.36
UBA52-208	ENST00000596304	PSMD12	O00232	456 aa	Predicted RBP	12.81	□□□□□ -0.36
UBA52-208	ENST00000596304	TFEC	O14948	347 aa	Predicted RBP	12.81	□□□□□ -0.36
UBA52-208	ENST00000596304	CDC40	O60508	579 aa	Known RBP eCLIP	12.81	□□□□□ -0.36
UBA52-208	ENST00000596304	TTC4	O95801	387 aa		12.81	□□□□□ -0.36
UBA52-208	ENST00000596304	TPO	P07202	933 aa		12.81	□□□□□ -0.36
UBA52-208	ENST00000596304	ENO2	P09104	434 aa	Predicted RBP	12.81	□□□□□ -0.36
UBA52-208	ENST00000596304	RIPPLY3	P57055	190 aa		12.81	□□□□□ -0.36
UBA52-208	ENST00000596304	TLE4	Q04727	773 aa		12.81	□□□□□ -0.36
UBA52-208	ENST00000596304	PPP1R7	Q15435	360 aa		12.81	□□□□□ -0.36
UBA52-208	ENST00000596304	PPP1R3A	Q16821	1122 aa		12.81	□□□□□ -0.36
UBA52-208	ENST00000596304	HP1BP3	Q5SSJ5	553 aa	Predicted RBP	12.81	□□□□□ -0.36
UBA52-208	ENST00000596304	FAM45BP	Q6NSW5	357 aa		12.81	□□□□□ -0.36
UBA52-208	ENST00000596304	TRMT10B	Q6PF06	316 aa	Known RBP	12.81	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms