RNA–Protein interactions for RNA: ENST00000595242.3

SCAF1-202, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-202ENST00000595242 UBXN8O00124 270 aa12.24□□□□□ -0.45
SCAF1-202ENST00000595242 EIF3FO00303 357 aaPredicted RBP12.24□□□□□ -0.45
SCAF1-202ENST00000595242 GYG2O15488 501 aa12.24□□□□□ -0.45
SCAF1-202ENST00000595242 CYP2A7P20853 494 aa12.24□□□□□ -0.45
SCAF1-202ENST00000595242 AGXTP21549 392 aa12.24□□□□□ -0.45
SCAF1-202ENST00000595242 CPOXP36551 454 aa12.24□□□□□ -0.45
SCAF1-202ENST00000595242 HALP42357 657 aa12.24□□□□□ -0.45
SCAF1-202ENST00000595242 RAP1GDS1P52306 607 aa12.24□□□□□ -0.45
SCAF1-202ENST00000595242 KLF10Q13118 480 aa12.24□□□□□ -0.45
SCAF1-202ENST00000595242 TSNQ15631 228 aaKnown RBP12.24□□□□□ -0.45
SCAF1-202ENST00000595242 MTFR2Q6P444 385 aa12.24□□□□□ -0.45
SCAF1-202ENST00000595242 RPTNQ6XPR3 784 aa12.24□□□□□ -0.45
SCAF1-202ENST00000595242 CHSY3Q70JA7 882 aa12.24□□□□□ -0.45
SCAF1-202ENST00000595242 ZNF547Q8IVP9 402 aa12.24□□□□□ -0.45
SCAF1-202ENST00000595242 ARHGAP24Q8N264 748 aa12.24□□□□□ -0.45
SCAF1-202ENST00000595242 BCORP1Q8N888 145 aa12.24□□□□□ -0.45
SCAF1-202ENST00000595242 RBM15BQ8NDT2 890 aaKnown RBP12.24□□□□□ -0.45
SCAF1-202ENST00000595242 CFAP61Q8NHU2 1237 aa12.24□□□□□ -0.45
SCAF1-202ENST00000595242 ZNF483Q8TF39 744 aaPredicted RBP12.24□□□□□ -0.45
SCAF1-202ENST00000595242 CMTM5Q96DZ9 223 aa12.24□□□□□ -0.45
SCAF1-202ENST00000595242 PHF21BQ96EK2 531 aa12.24□□□□□ -0.45
SCAF1-202ENST00000595242 LINGO1Q96FE5 620 aa12.24□□□□□ -0.45
SCAF1-202ENST00000595242 TMUB1Q9BVT8 246 aa12.24□□□□□ -0.45
SCAF1-202ENST00000595242 NUF2Q9BZD4 464 aa12.24□□□□□ -0.45
SCAF1-202ENST00000595242 RAD18Q9NS91 495 aa12.24□□□□□ -0.45
SCAF1-202ENST00000595242 ZDHHC3Q9NYG2 299 aa12.24□□□□□ -0.45
SCAF1-202ENST00000595242 NUDT4Q9NZJ9 180 aa12.24□□□□□ -0.45
SCAF1-202ENST00000595242 PKD2L2Q9NZM6 624 aa12.24□□□□□ -0.45
SCAF1-202ENST00000595242 CRLS1Q9UJA2 301 aa12.24□□□□□ -0.45
SCAF1-202ENST00000595242 RNF112Q9ULX5 631 aa12.24□□□□□ -0.45
SCAF1-202ENST00000595242 GOLGA8QA0A0J9YX86 632 aa12.23□□□□□ -0.45
SCAF1-202ENST00000595242 RGSL1A5PLK6 1076 aa12.23□□□□□ -0.45
SCAF1-202ENST00000595242 GOLGA8OA6NCC3 632 aa12.23□□□□□ -0.45
SCAF1-202ENST00000595242 NPEPPSL1A6NEC2 478 aa12.23□□□□□ -0.45
SCAF1-202ENST00000595242 B2RBV5 119 aa12.23□□□□□ -0.45
SCAF1-202ENST00000595242 TMEM150CB9EJG8 249 aa12.23□□□□□ -0.45
SCAF1-202ENST00000595242 E9PBE3 544 aa12.23□□□□□ -0.45
SCAF1-202ENST00000595242 GOLGA8NF8WBI6 632 aa12.23□□□□□ -0.45
SCAF1-202ENST00000595242 CDC7O00311 574 aa12.23□□□□□ -0.45
SCAF1-202ENST00000595242 BTN3A1O00481 513 aa12.23□□□□□ -0.45
SCAF1-202ENST00000595242 UBFD1O14562 309 aaKnown RBP12.23□□□□□ -0.45
SCAF1-202ENST00000595242 PCDH17O14917 1159 aa12.23□□□□□ -0.45
SCAF1-202ENST00000595242 GPR39O43194 453 aa12.23□□□□□ -0.45
SCAF1-202ENST00000595242 SUPT7LO94864 414 aa12.23□□□□□ -0.45
SCAF1-202ENST00000595242 JUNP05412 331 aaKnown RBP12.23□□□□□ -0.45
SCAF1-202ENST00000595242 DRD2P14416 443 aa12.23□□□□□ -0.45
SCAF1-202ENST00000595242 EPHA3P29320 983 aa12.23□□□□□ -0.45
SCAF1-202ENST00000595242 FOLR3P41439 243 aa12.23□□□□□ -0.45
SCAF1-202ENST00000595242 NSG1P42857 185 aa12.23□□□□□ -0.45
SCAF1-202ENST00000595242 ART1P52961 327 aa12.23□□□□□ -0.45
SCAF1-202ENST00000595242 IRX1P78414 480 aaPredicted RBP12.23□□□□□ -0.45
SCAF1-202ENST00000595242 TLE4Q04727 773 aa12.23□□□□□ -0.45
SCAF1-202ENST00000595242 BTKQ06187 659 aa12.23□□□□□ -0.45
SCAF1-202ENST00000595242 AIMP2Q13155 320 aaKnown RBP12.23□□□□□ -0.45
SCAF1-202ENST00000595242 TLR1Q15399 786 aa12.23□□□□□ -0.45
SCAF1-202ENST00000595242 UGT3A2Q3SY77 523 aa12.23□□□□□ -0.45
SCAF1-202ENST00000595242 MLIPQ5VWP3 458 aa12.23□□□□□ -0.45
SCAF1-202ENST00000595242 KANK2Q63ZY3 851 aa12.23□□□□□ -0.45
SCAF1-202ENST00000595242 PTRHD1Q6GMV3 140 aaKnown RBP12.23□□□□□ -0.45
SCAF1-202ENST00000595242 XKRXQ6PP77 449 aa12.23□□□□□ -0.45
SCAF1-202ENST00000595242 IGFL2Q6UWQ7 119 aa12.23□□□□□ -0.45
SCAF1-202ENST00000595242 ADAMTSL2Q86TH1 951 aa12.23□□□□□ -0.45
SCAF1-202ENST00000595242 CPNE9Q8IYJ1 553 aa12.23□□□□□ -0.45
SCAF1-202ENST00000595242 OR1L3Q8NH93 324 aa12.23□□□□□ -0.45
SCAF1-202ENST00000595242 CEP70Q8NHQ1 597 aa12.23□□□□□ -0.45
SCAF1-202ENST00000595242 AGR3Q8TD06 166 aa12.23□□□□□ -0.45
SCAF1-202ENST00000595242 CHTF18Q8WVB6 975 aa12.23□□□□□ -0.45
SCAF1-202ENST00000595242 EEF1AKMT1Q8WVE0 214 aa12.23□□□□□ -0.45
SCAF1-202ENST00000595242 PPM1MQ96MI6 270 aa12.23□□□□□ -0.45
SCAF1-202ENST00000595242 SPATA16Q9BXB7 569 aa12.23□□□□□ -0.45
SCAF1-202ENST00000595242 WDR55Q9H6Y2 383 aaPredicted RBP12.23□□□□□ -0.45
SCAF1-202ENST00000595242 MCCC2Q9HCC0 563 aa12.23□□□□□ -0.45
SCAF1-202ENST00000595242 TNFRSF12AQ9NP84 129 aa12.23□□□□□ -0.45
SCAF1-202ENST00000595242 STK38LQ9Y2H1 464 aa12.23□□□□□ -0.45
SCAF1-202ENST00000595242 PTRH2Q9Y3E5 179 aaKnown RBP12.23□□□□□ -0.45
SCAF1-202ENST00000595242 TRAF6Q9Y4K3 522 aa12.23□□□□□ -0.45
SCAF1-202ENST00000595242 ABCA4P78363 2273 aa12.23□□□□□ -0.45
SCAF1-202ENST00000595242 SNRNP200O75643 2136 aaKnown RBP12.23□□□□□ -0.45
SCAF1-202ENST00000595242 TMEM233B4DJY2 109 aa12.22□□□□□ -0.45
SCAF1-202ENST00000595242 SUPT3HB4E1H0 165 aa12.22□□□□□ -0.45
SCAF1-202ENST00000595242 VEGFDO43915 354 aa12.22□□□□□ -0.45
SCAF1-202ENST00000595242 SUPT3HO75486 399 aa12.22□□□□□ -0.45
SCAF1-202ENST00000595242 CDK14O94921 469 aa12.22□□□□□ -0.45
SCAF1-202ENST00000595242 CBSLP0DN79 551 aa12.22□□□□□ -0.45
SCAF1-202ENST00000595242 COX4I1P13073 169 aa12.22□□□□□ -0.45
SCAF1-202ENST00000595242 GFAPP14136 432 aa12.22□□□□□ -0.45
SCAF1-202ENST00000595242 NCF2P19878 526 aaPredicted RBP12.22□□□□□ -0.45
SCAF1-202ENST00000595242 CHRM3P20309 590 aa12.22□□□□□ -0.45
SCAF1-202ENST00000595242 CBSP35520 551 aa12.22□□□□□ -0.45
SCAF1-202ENST00000595242 RGS4P49798 205 aa12.22□□□□□ -0.45
SCAF1-202ENST00000595242 ATP4BP51164 291 aa12.22□□□□□ -0.45
SCAF1-202ENST00000595242 TDGF1P3P51864 188 aa12.22□□□□□ -0.45
SCAF1-202ENST00000595242 LCP2Q13094 533 aa12.22□□□□□ -0.45
SCAF1-202ENST00000595242 GBX1Q14549 363 aa12.22□□□□□ -0.45
SCAF1-202ENST00000595242 PDCD2Q16342 344 aaPredicted RBP12.22□□□□□ -0.45
SCAF1-202ENST00000595242 CYP2A13Q16696 494 aa12.22□□□□□ -0.45
SCAF1-202ENST00000595242 PPP1R3AQ16821 1122 aa12.22□□□□□ -0.45
SCAF1-202ENST00000595242 PFKFB4Q16877 469 aa12.22□□□□□ -0.45
SCAF1-202ENST00000595242 GPRC6AQ5T6X5 926 aa12.22□□□□□ -0.45
SCAF1-202ENST00000595242 AGAP7PQ5VUJ5 663 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms