RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 C14orf79Q96F83 325 aa15.3■□□□□ 0.04
LIG1-205ENST00000593425 TSNARE1Q96NA8 513 aa15.3■□□□□ 0.04
LIG1-205ENST00000593425 SPOCK3Q9BQ16 436 aa15.3■□□□□ 0.04
LIG1-205ENST00000593425 VKORC1Q9BQB6 163 aa15.3■□□□□ 0.04
LIG1-205ENST00000593425 ENKD1Q9H0I2 346 aa15.3■□□□□ 0.04
LIG1-205ENST00000593425 NECTIN3Q9NQS3 549 aa15.3■□□□□ 0.04
LIG1-205ENST00000593425 ZFP69BQ9UJL9 534 aa15.3■□□□□ 0.04
LIG1-205ENST00000593425 IKZF3Q9UKT9 509 aa15.3■□□□□ 0.04
LIG1-205ENST00000593425 PPT2Q9UMR5 302 aa15.3■□□□□ 0.04
LIG1-205ENST00000593425 DCHS2Q6V1P9 2916 aa15.3■□□□□ 0.04
LIG1-205ENST00000593425 F8P00451 2351 aa15.29■□□□□ 0.04
LIG1-205ENST00000593425 PRRG2O14669 202 aa15.29■□□□□ 0.04
LIG1-205ENST00000593425 GUCA1CO95843 209 aa15.29■□□□□ 0.04
LIG1-205ENST00000593425 HLCSP50747 726 aa15.29■□□□□ 0.04
LIG1-205ENST00000593425 AP1S2P56377 157 aa15.29■□□□□ 0.04
LIG1-205ENST00000593425 IL2P60568 153 aa15.29■□□□□ 0.04
LIG1-205ENST00000593425 REEP5Q00765 189 aa15.29■□□□□ 0.04
LIG1-205ENST00000593425 ABHD13Q7L211 337 aa15.29■□□□□ 0.04
LIG1-205ENST00000593425 CNTN4Q8IWV2 1026 aa15.29■□□□□ 0.04
LIG1-205ENST00000593425 MARVELD2Q8N4S9 558 aa15.29■□□□□ 0.04
LIG1-205ENST00000593425 SLC6A16Q9GZN6 736 aa15.29■□□□□ 0.04
LIG1-205ENST00000593425 AICDAQ9GZX7 198 aa15.29■□□□□ 0.04
LIG1-205ENST00000593425 KLHL31Q9H511 634 aa15.29■□□□□ 0.04
LIG1-205ENST00000593425 PRDM9Q9NQV7 894 aa15.29■□□□□ 0.04
LIG1-205ENST00000593425 ADGRG4Q8IZF6 3080 aa15.29■□□□□ 0.04
LIG1-205ENST00000593425 A0A1B0GTH9 108 aa15.28■□□□□ 0.04
LIG1-205ENST00000593425 PABPN1LA6NDY0 278 aaKnown RBP15.28■□□□□ 0.04
LIG1-205ENST00000593425 SMIM10L1P0DMW3 83 aa15.28■□□□□ 0.04
LIG1-205ENST00000593425 AHRP35869 848 aa15.28■□□□□ 0.04
LIG1-205ENST00000593425 CCZ1BP86790 482 aa15.28■□□□□ 0.04
LIG1-205ENST00000593425 CCZ1P86791 482 aaPredicted RBP15.28■□□□□ 0.04
LIG1-205ENST00000593425 TLE4Q04727 773 aa15.28■□□□□ 0.04
LIG1-205ENST00000593425 PDAP1Q13442 181 aaKnown RBP15.28■□□□□ 0.04
LIG1-205ENST00000593425 CSHL1Q14406 222 aa15.28■□□□□ 0.04
LIG1-205ENST00000593425 TESK1Q15569 626 aa15.28■□□□□ 0.04
LIG1-205ENST00000593425 MSS51Q4VC12 460 aa15.28■□□□□ 0.04
LIG1-205ENST00000593425 SPANXN3Q5MJ09 141 aa15.28■□□□□ 0.04
LIG1-205ENST00000593425 HECTD2Q5U5R9 776 aa15.28■□□□□ 0.04
LIG1-205ENST00000593425 NIPAL1Q6NVV3 410 aa15.28■□□□□ 0.04
LIG1-205ENST00000593425 SBSNQ6UWP8 590 aa15.28■□□□□ 0.04
LIG1-205ENST00000593425 MEX3BQ6ZN04 569 aaKnown RBP15.28■□□□□ 0.04
LIG1-205ENST00000593425 TMPRSS11BQ86T26 416 aa15.28■□□□□ 0.04
LIG1-205ENST00000593425 CD163Q86VB7 1156 aa15.28■□□□□ 0.04
LIG1-205ENST00000593425 IGDCC3Q8IVU1 814 aa15.28■□□□□ 0.04
LIG1-205ENST00000593425 SULF2Q8IWU5 870 aa15.28■□□□□ 0.04
LIG1-205ENST00000593425 CA13Q8N1Q1 262 aa15.28■□□□□ 0.04
LIG1-205ENST00000593425 ARMC10Q8N2F6 343 aa15.28■□□□□ 0.04
LIG1-205ENST00000593425 TBC1D19Q8N5T2 526 aa15.28■□□□□ 0.04
LIG1-205ENST00000593425 GPATCH11Q8N954 259 aa15.28■□□□□ 0.04
LIG1-205ENST00000593425 APCDD1LQ8NCL9 501 aa15.28■□□□□ 0.04
LIG1-205ENST00000593425 CA5BP1Q8WTZ4 195 aa15.28■□□□□ 0.04
LIG1-205ENST00000593425 TMEM125Q96AQ2 219 aa15.28■□□□□ 0.04
LIG1-205ENST00000593425 CERS2Q96G23 380 aa15.28■□□□□ 0.04
LIG1-205ENST00000593425 SMIM10Q96HG1 83 aa15.28■□□□□ 0.04
LIG1-205ENST00000593425 DEFB126Q9BYW3 111 aa15.28■□□□□ 0.04
LIG1-205ENST00000593425 RHBGQ9H310 441 aa15.28■□□□□ 0.04
LIG1-205ENST00000593425 PLAC1Q9HBJ0 212 aa15.28■□□□□ 0.04
LIG1-205ENST00000593425 ZFATQ9P243 1243 aa15.28■□□□□ 0.04
LIG1-205ENST00000593425 KLF13Q9Y2Y9 288 aaPredicted RBP15.28■□□□□ 0.04
LIG1-205ENST00000593425 HRH3Q9Y5N1 445 aa15.28■□□□□ 0.04
LIG1-205ENST00000593425 TFECO14948 347 aaPredicted RBP15.27■□□□□ 0.04
LIG1-205ENST00000593425 NRDCO43847 1150 aa15.27■□□□□ 0.04
LIG1-205ENST00000593425 HS6ST1O60243 411 aa15.27■□□□□ 0.04
LIG1-205ENST00000593425 TPOP07202 933 aa15.27■□□□□ 0.04
LIG1-205ENST00000593425 RNH1P13489 461 aaKnown RBP15.27■□□□□ 0.04
LIG1-205ENST00000593425 GPR85P60893 370 aa15.27■□□□□ 0.04
LIG1-205ENST00000593425 CMPK2Q5EBM0 449 aa15.27■□□□□ 0.04
LIG1-205ENST00000593425 KIAA0408Q6ZU52 694 aa15.27■□□□□ 0.04
LIG1-205ENST00000593425 CDH24Q86UP0 819 aa15.27■□□□□ 0.04
LIG1-205ENST00000593425 POGLUT1Q8NBL1 392 aa15.27■□□□□ 0.04
LIG1-205ENST00000593425 FAM57AQ8TBR7 257 aa15.27■□□□□ 0.04
LIG1-205ENST00000593425 CHTF18Q8WVB6 975 aa15.27■□□□□ 0.04
LIG1-205ENST00000593425 ATL1Q8WXF7 558 aa15.27■□□□□ 0.04
LIG1-205ENST00000593425 PDLIM2Q96JY6 352 aa15.27■□□□□ 0.04
LIG1-205ENST00000593425 PBKQ96KB5 322 aa15.27■□□□□ 0.04
LIG1-205ENST00000593425 TREX2Q9BQ50 279 aaPredicted RBP15.27■□□□□ 0.04
LIG1-205ENST00000593425 TRIM54Q9BYV2 358 aa15.27■□□□□ 0.04
LIG1-205ENST00000593425 PELI2Q9HAT8 420 aa15.27■□□□□ 0.04
LIG1-205ENST00000593425 ZNF223Q9UK11 482 aaPredicted RBP15.27■□□□□ 0.04
LIG1-205ENST00000593425 PPP2R2CQ9Y2T4 447 aa15.27■□□□□ 0.04
LIG1-205ENST00000593425 HCFC1P51610 2035 aa15.27■□□□□ 0.03
LIG1-205ENST00000593425 TRBV11-1A0A0K0K1C0 115 aa15.26■□□□□ 0.03
LIG1-205ENST00000593425 PSMD12O00232 456 aaPredicted RBP15.26■□□□□ 0.03
LIG1-205ENST00000593425 PGRMC1O00264 195 aaKnown RBP15.26■□□□□ 0.03
LIG1-205ENST00000593425 FCHO1O14526 889 aa15.26■□□□□ 0.03
LIG1-205ENST00000593425 PEX1O43933 1283 aa15.26■□□□□ 0.03
LIG1-205ENST00000593425 CDC40O60508 579 aaKnown RBP eCLIP15.26■□□□□ 0.03
LIG1-205ENST00000593425 MYO1DO94832 1006 aa15.26■□□□□ 0.03
LIG1-205ENST00000593425 TTC4O95801 387 aa15.26■□□□□ 0.03
LIG1-205ENST00000593425 ENO2P09104 434 aaPredicted RBP15.26■□□□□ 0.03
LIG1-205ENST00000593425 TFEBP19484 476 aa15.26■□□□□ 0.03
LIG1-205ENST00000593425 PTGS2P35354 604 aa15.26■□□□□ 0.03
LIG1-205ENST00000593425 NR0B1P51843 470 aaKnown RBP15.26■□□□□ 0.03
LIG1-205ENST00000593425 PPP1R3AQ16821 1122 aa15.26■□□□□ 0.03
LIG1-205ENST00000593425 TOR1AIP1Q5JTV8 583 aa15.26■□□□□ 0.03
LIG1-205ENST00000593425 TEDDM1Q5T9Z0 273 aa15.26■□□□□ 0.03
LIG1-205ENST00000593425 NXPE4Q6UWF7 544 aa15.26■□□□□ 0.03
LIG1-205ENST00000593425 MDGA2Q7Z553 956 aa15.26■□□□□ 0.03
LIG1-205ENST00000593425 GALNT7Q86SF2 657 aa15.26■□□□□ 0.03
LIG1-205ENST00000593425 THOC6Q86W42 341 aaKnown RBP15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms