RNA–Protein interactions for RNA: ENST00000593074.5

CLIP3-206, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLIP3, Length 2,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-206ENST00000593074 YAP1P46937 504 aaKnown RBP18.84■□□□□ 0.61
CLIP3-206ENST00000593074 CLCNKAP51800 687 aa18.84■□□□□ 0.61
CLIP3-206ENST00000593074 ITGA1P56199 1179 aa18.84■□□□□ 0.61
CLIP3-206ENST00000593074 REEP5Q00765 189 aa18.84■□□□□ 0.61
CLIP3-206ENST00000593074 KIAA1161Q6NSJ0 714 aa18.84■□□□□ 0.61
CLIP3-206ENST00000593074 ZNF773Q6PK81 442 aa18.84■□□□□ 0.61
CLIP3-206ENST00000593074 ZNF852Q6ZMS4 543 aa18.84■□□□□ 0.61
CLIP3-206ENST00000593074 IL17RCQ8NAC3 791 aa18.84■□□□□ 0.61
CLIP3-206ENST00000593074 OR52N2Q8NGI0 321 aa18.84■□□□□ 0.61
CLIP3-206ENST00000593074 HDAC2Q92769 488 aaKnown RBP18.84■□□□□ 0.61
CLIP3-206ENST00000593074 MAL2Q969L2 176 aa18.84■□□□□ 0.61
CLIP3-206ENST00000593074 SLC35A5Q9BS91 424 aa18.84■□□□□ 0.61
CLIP3-206ENST00000593074 ZNF717Q9BY31 904 aaPredicted RBP18.84■□□□□ 0.61
CLIP3-206ENST00000593074 LTB4R2Q9NPC1 389 aa18.84■□□□□ 0.61
CLIP3-206ENST00000593074 CUEDC1Q9NWM3 386 aaPredicted RBP18.84■□□□□ 0.61
CLIP3-206ENST00000593074 ORC6Q9Y5N6 252 aa18.84■□□□□ 0.61
CLIP3-206ENST00000593074 A0A1W2PQU0 124 aa18.83■□□□□ 0.61
CLIP3-206ENST00000593074 hCG_2039718K7EN88 272 aa18.83■□□□□ 0.61
CLIP3-206ENST00000593074 PLPP1O14494 284 aa18.83■□□□□ 0.61
CLIP3-206ENST00000593074 SLC16A6O15403 523 aa18.83■□□□□ 0.61
CLIP3-206ENST00000593074 TNFRSF21O75509 655 aa18.83■□□□□ 0.61
CLIP3-206ENST00000593074 ITGAMP11215 1152 aa18.83■□□□□ 0.61
CLIP3-206ENST00000593074 FPR1P21462 350 aa18.83■□□□□ 0.61
CLIP3-206ENST00000593074 CXCR2P25025 360 aa18.83■□□□□ 0.61
CLIP3-206ENST00000593074 SERPINB1P30740 379 aa18.83■□□□□ 0.61
CLIP3-206ENST00000593074 DNAJA1P31689 397 aaKnown RBP18.83■□□□□ 0.61
CLIP3-206ENST00000593074 IQCCQ4KMZ1 466 aa18.83■□□□□ 0.61
CLIP3-206ENST00000593074 KHDRBS2Q5VWX1 349 aaKnown RBP18.83■□□□□ 0.61
CLIP3-206ENST00000593074 DUS1LQ6P1R4 473 aaKnown RBP18.83■□□□□ 0.61
CLIP3-206ENST00000593074 CEP68Q76N32 757 aa18.83■□□□□ 0.61
CLIP3-206ENST00000593074 ANKRD53Q8N9V6 530 aa18.83■□□□□ 0.61
CLIP3-206ENST00000593074 MSLNLQ96KJ4 702 aa18.83■□□□□ 0.61
CLIP3-206ENST00000593074 NECTIN4Q96NY8 510 aa18.83■□□□□ 0.61
CLIP3-206ENST00000593074 MS4A8Q9BY19 250 aa18.83■□□□□ 0.61
CLIP3-206ENST00000593074 SLC17A9Q9BYT1 436 aa18.83■□□□□ 0.61
CLIP3-206ENST00000593074 PITHD1Q9GZP4 211 aaPredicted RBP18.83■□□□□ 0.61
CLIP3-206ENST00000593074 SLC6A17Q9H1V8 727 aa18.83■□□□□ 0.61
CLIP3-206ENST00000593074 AHSPQ9NZD4 102 aa18.83■□□□□ 0.61
CLIP3-206ENST00000593074 LMCD1Q9NZU5 365 aa18.83■□□□□ 0.61
CLIP3-206ENST00000593074 WDR37Q9Y2I8 494 aa18.83■□□□□ 0.61
CLIP3-206ENST00000593074 NUMA1Q14980 2115 aa18.83■□□□□ 0.61
CLIP3-206ENST00000593074 LOC100130705A0A1B0GUX0 176 aa18.83■□□□□ 0.6
CLIP3-206ENST00000593074 ANKDD1BA6NHY2 528 aa18.83■□□□□ 0.6
CLIP3-206ENST00000593074 TMEM229AB2RXF0 380 aa18.83■□□□□ 0.6
CLIP3-206ENST00000593074 ZNF701M0R085 212 aaPredicted RBP18.83■□□□□ 0.6
CLIP3-206ENST00000593074 RNGTTO60942 597 aaKnown RBP18.83■□□□□ 0.6
CLIP3-206ENST00000593074 GCM2O75603 506 aaPredicted RBP18.83■□□□□ 0.6
CLIP3-206ENST00000593074 FKBP9O95302 570 aa18.83■□□□□ 0.6
CLIP3-206ENST00000593074 KLF8O95600 359 aaPredicted RBP18.83■□□□□ 0.6
CLIP3-206ENST00000593074 EGFP01133 1207 aa18.83■□□□□ 0.6
CLIP3-206ENST00000593074 FUCA1P04066 466 aa18.83■□□□□ 0.6
CLIP3-206ENST00000593074 HOXB2P14652 356 aa18.83■□□□□ 0.6
CLIP3-206ENST00000593074 CRHBPP24387 322 aa18.83■□□□□ 0.6
CLIP3-206ENST00000593074 PSMB5P28074 263 aa18.83■□□□□ 0.6
CLIP3-206ENST00000593074 PCSK6P29122 969 aa18.83■□□□□ 0.6
CLIP3-206ENST00000593074 CCR8P51685 355 aa18.83■□□□□ 0.6
CLIP3-206ENST00000593074 KCNJ10P78508 379 aa18.83■□□□□ 0.6
CLIP3-206ENST00000593074 FADDQ13158 208 aa18.83■□□□□ 0.6
CLIP3-206ENST00000593074 DYNC1I2Q13409 638 aaKnown RBP18.83■□□□□ 0.6
CLIP3-206ENST00000593074 IL18R1Q13478 541 aa18.83■□□□□ 0.6
CLIP3-206ENST00000593074 PRSS53Q2L4Q9 553 aa18.83■□□□□ 0.6
CLIP3-206ENST00000593074 COX20Q5RI15 118 aa18.83■□□□□ 0.6
CLIP3-206ENST00000593074 DEPDC1Q5TB30 811 aa18.83■□□□□ 0.6
CLIP3-206ENST00000593074 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.83■□□□□ 0.6
CLIP3-206ENST00000593074 CHDHQ8NE62 594 aaPredicted RBP18.83■□□□□ 0.6
CLIP3-206ENST00000593074 NRBF2Q96F24 287 aa18.83■□□□□ 0.6
CLIP3-206ENST00000593074 C7orf34Q96L11 122 aa18.83■□□□□ 0.6
CLIP3-206ENST00000593074 BARD1Q99728 777 aaKnown RBP18.83■□□□□ 0.6
CLIP3-206ENST00000593074 TIMM29Q9BSF4 260 aa18.83■□□□□ 0.6
CLIP3-206ENST00000593074 SORBS1Q9BX66 1292 aaKnown RBP18.83■□□□□ 0.6
CLIP3-206ENST00000593074 C1QTNF7Q9BXJ2 289 aa18.83■□□□□ 0.6
CLIP3-206ENST00000593074 NT5DC2Q9H857 520 aa18.83■□□□□ 0.6
CLIP3-206ENST00000593074 ADPRHL2Q9NX46 363 aa18.83■□□□□ 0.6
CLIP3-206ENST00000593074 TAS2R9Q9NYW1 312 aa18.83■□□□□ 0.6
CLIP3-206ENST00000593074 SPASTQ9UBP0 616 aa18.83■□□□□ 0.6
CLIP3-206ENST00000593074 RAPGEFL1Q9UHV5 662 aa18.83■□□□□ 0.6
CLIP3-206ENST00000593074 ADAM23O75077 832 aa18.82■□□□□ 0.6
CLIP3-206ENST00000593074 CPNE6O95741 557 aa18.82■□□□□ 0.6
CLIP3-206ENST00000593074 ACP5P13686 325 aa18.82■□□□□ 0.6
CLIP3-206ENST00000593074 IGFBP5P24593 272 aa18.82■□□□□ 0.6
CLIP3-206ENST00000593074 TTKP33981 857 aa18.82■□□□□ 0.6
CLIP3-206ENST00000593074 TMEM259Q4ZIN3 620 aa18.82■□□□□ 0.6
CLIP3-206ENST00000593074 ZNF691Q5VV52 312 aa18.82■□□□□ 0.6
CLIP3-206ENST00000593074 CHST15Q7LFX5 561 aaPredicted RBP18.82■□□□□ 0.6
CLIP3-206ENST00000593074 HORMAD1Q86X24 394 aa18.82■□□□□ 0.6
CLIP3-206ENST00000593074 LINC01555Q8NAE3 123 aa18.82■□□□□ 0.6
CLIP3-206ENST00000593074 ZNF576Q9H609 170 aa18.82■□□□□ 0.6
CLIP3-206ENST00000593074 BAG5Q9UL15 447 aa18.82■□□□□ 0.6
CLIP3-206ENST00000593074 ICKQ9UPZ9 632 aa18.82■□□□□ 0.6
CLIP3-206ENST00000593074 TBC1D3DA0A087WVF3 549 aa18.81■□□□□ 0.6
CLIP3-206ENST00000593074 TBC1D3IA0A087WXS9 549 aa18.81■□□□□ 0.6
CLIP3-206ENST00000593074 TBC1D3EA0A087X179 549 aa18.81■□□□□ 0.6
CLIP3-206ENST00000593074 TBC1D3KA0A087X1G2 549 aa18.81■□□□□ 0.6
CLIP3-206ENST00000593074 A0A1W2PQF6 199 aa18.81■□□□□ 0.6
CLIP3-206ENST00000593074 TBC1D3FA6NER0 549 aaPredicted RBP18.81■□□□□ 0.6
CLIP3-206ENST00000593074 TBC1D3LB9A6J9 549 aa18.81■□□□□ 0.6
CLIP3-206ENST00000593074 B4GAT1O43505 415 aa18.81■□□□□ 0.6
CLIP3-206ENST00000593074 TBC1D3HP0C7X1 549 aa18.81■□□□□ 0.6
CLIP3-206ENST00000593074 ETFAP13804 333 aa18.81■□□□□ 0.6
CLIP3-206ENST00000593074 CRATP43155 626 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms