RNA–Protein interactions for RNA: ENST00000592885.5

APOC1-209, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 562 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-209ENST00000592885 CTNNAL1Q9UBT7 734 aa12.46□□□□□ -0.41
APOC1-209ENST00000592885 IKZF3Q9UKT9 509 aa12.46□□□□□ -0.41
APOC1-209ENST00000592885 SLC22A14Q9Y267 594 aa12.46□□□□□ -0.41
APOC1-209ENST00000592885 MMACHCQ9Y4U1 282 aa12.46□□□□□ -0.41
APOC1-209ENST00000592885 CACNA1DQ01668 2161 aa12.45□□□□□ -0.42
APOC1-209ENST00000592885 ITPR2Q14571 2701 aa12.45□□□□□ -0.42
APOC1-209ENST00000592885 A0A088AWK7 358 aa12.45□□□□□ -0.42
APOC1-209ENST00000592885 ENO4A6NNW6 628 aa12.45□□□□□ -0.42
APOC1-209ENST00000592885 EFCAB8A8MWE9 144 aa12.45□□□□□ -0.42
APOC1-209ENST00000592885 PRSS44E7EML9 344 aa12.45□□□□□ -0.42
APOC1-209ENST00000592885 CDC7O00311 574 aa12.45□□□□□ -0.42
APOC1-209ENST00000592885 TP73O15350 636 aa12.45□□□□□ -0.42
APOC1-209ENST00000592885 EIF3HO15372 352 aaKnown RBP eCLIP12.45□□□□□ -0.42
APOC1-209ENST00000592885 SLC19A2O60779 497 aa12.45□□□□□ -0.42
APOC1-209ENST00000592885 ZNF10P21506 573 aaPredicted RBP12.45□□□□□ -0.42
APOC1-209ENST00000592885 CD96P40200 585 aa12.45□□□□□ -0.42
APOC1-209ENST00000592885 SLC6A12P48065 614 aa12.45□□□□□ -0.42
APOC1-209ENST00000592885 PGGT1BP53609 377 aa12.45□□□□□ -0.42
APOC1-209ENST00000592885 SLC12A2P55011 1212 aa12.45□□□□□ -0.42
APOC1-209ENST00000592885 TAS2R39P59534 338 aa12.45□□□□□ -0.42
APOC1-209ENST00000592885 OLR1P78380 273 aa12.45□□□□□ -0.42
APOC1-209ENST00000592885 PMP22Q01453 160 aa12.45□□□□□ -0.42
APOC1-209ENST00000592885 POU4F1Q01851 419 aa12.45□□□□□ -0.42
APOC1-209ENST00000592885 HYAL2Q12891 473 aa12.45□□□□□ -0.42
APOC1-209ENST00000592885 CDKL4Q5MAI5 379 aa12.45□□□□□ -0.42
APOC1-209ENST00000592885 RPS19BP1Q86WX3 136 aaKnown RBP12.45□□□□□ -0.42
APOC1-209ENST00000592885 ARMC10Q8N2F6 343 aa12.45□□□□□ -0.42
APOC1-209ENST00000592885 CREB3L4Q8TEY5 395 aa12.45□□□□□ -0.42
APOC1-209ENST00000592885 ITLN2Q8WWU7 325 aaPredicted RBP12.45□□□□□ -0.42
APOC1-209ENST00000592885 CDKL2Q92772 493 aa12.45□□□□□ -0.42
APOC1-209ENST00000592885 TSPAN17Q96FV3 270 aa12.45□□□□□ -0.42
APOC1-209ENST00000592885 CCDC120Q96HB5 630 aa12.45□□□□□ -0.42
APOC1-209ENST00000592885 MAGED4Q96JG8 741 aa12.45□□□□□ -0.42
APOC1-209ENST00000592885 FRMD6Q96NE9 622 aa12.45□□□□□ -0.42
APOC1-209ENST00000592885 PTCHD1Q96NR3 888 aa12.45□□□□□ -0.42
APOC1-209ENST00000592885 NPLQ9BXD5 320 aaPredicted RBP12.45□□□□□ -0.42
APOC1-209ENST00000592885 DERL2Q9GZP9 239 aa12.45□□□□□ -0.42
APOC1-209ENST00000592885 EHD1Q9H4M9 534 aa12.45□□□□□ -0.42
APOC1-209ENST00000592885 NT5DC2Q9H857 520 aa12.45□□□□□ -0.42
APOC1-209ENST00000592885 USP27XA6NNY8 438 aa12.44□□□□□ -0.42
APOC1-209ENST00000592885 CCL21O00585 134 aa12.44□□□□□ -0.42
APOC1-209ENST00000592885 FCHO1O14526 889 aa12.44□□□□□ -0.42
APOC1-209ENST00000592885 B4GALT2O60909 372 aa12.44□□□□□ -0.42
APOC1-209ENST00000592885 H2AFYO75367 372 aaKnown RBP12.44□□□□□ -0.42
APOC1-209ENST00000592885 NEURL1O76050 574 aa12.44□□□□□ -0.42
APOC1-209ENST00000592885 WDR47O94967 919 aa12.44□□□□□ -0.42
APOC1-209ENST00000592885 SP1P08047 785 aa12.44□□□□□ -0.42
APOC1-209ENST00000592885 C1GALT1C1LP0DN25 315 aa12.44□□□□□ -0.42
APOC1-209ENST00000592885 AGAP20933 346 aa12.44□□□□□ -0.42
APOC1-209ENST00000592885 SAT1P21673 171 aa12.44□□□□□ -0.42
APOC1-209ENST00000592885 TRHRP34981 398 aaPredicted RBP12.44□□□□□ -0.42
APOC1-209ENST00000592885 RAB8AP61006 207 aa12.44□□□□□ -0.42
APOC1-209ENST00000592885 ALDH6A1Q02252 535 aaKnown RBP12.44□□□□□ -0.42
APOC1-209ENST00000592885 OC90Q02509 493 aaPredicted RBP12.44□□□□□ -0.42
APOC1-209ENST00000592885 FASTKD3Q14CZ7 662 aaKnown RBP12.44□□□□□ -0.42
APOC1-209ENST00000592885 RBBP5Q15291 538 aaKnown RBP12.44□□□□□ -0.42
APOC1-209ENST00000592885 TSNQ15631 228 aaKnown RBP12.44□□□□□ -0.42
APOC1-209ENST00000592885 TOR1AIP1Q5JTV8 583 aa12.44□□□□□ -0.42
APOC1-209ENST00000592885 BNC2Q6ZN30 1099 aaPredicted RBP12.44□□□□□ -0.42
APOC1-209ENST00000592885 Q6ZPB1 254 aaPredicted RBP12.44□□□□□ -0.42
APOC1-209ENST00000592885 SLCO4C1Q6ZQN7 724 aa12.44□□□□□ -0.42
APOC1-209ENST00000592885 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.44□□□□□ -0.42
APOC1-209ENST00000592885 ZBED8Q8IZ13 594 aa12.44□□□□□ -0.42
APOC1-209ENST00000592885 KRT78Q8N1N4 520 aa12.44□□□□□ -0.42
APOC1-209ENST00000592885 CA13Q8N1Q1 262 aa12.44□□□□□ -0.42
APOC1-209ENST00000592885 AMER2Q8N7J2 671 aa12.44□□□□□ -0.42
APOC1-209ENST00000592885 MARVELD3Q96A59 401 aa12.44□□□□□ -0.42
APOC1-209ENST00000592885 RHBDF1Q96CC6 855 aa12.44□□□□□ -0.42
APOC1-209ENST00000592885 FAR2Q96K12 515 aa12.44□□□□□ -0.42
APOC1-209ENST00000592885 CDCP1Q9H5V8 836 aa12.44□□□□□ -0.42
APOC1-209ENST00000592885 CNOT10Q9H9A5 744 aaKnown RBP12.44□□□□□ -0.42
APOC1-209ENST00000592885 LRFN1Q9P244 771 aa12.44□□□□□ -0.42
APOC1-209ENST00000592885 ZNF835Q9Y2P0 537 aa12.44□□□□□ -0.42
APOC1-209ENST00000592885 CENPEQ02224 2701 aa12.44□□□□□ -0.42
APOC1-209ENST00000592885 FAM187AA6NFU0 413 aa12.43□□□□□ -0.42
APOC1-209ENST00000592885 NME2P1O60361 137 aa12.43□□□□□ -0.42
APOC1-209ENST00000592885 MAN1A2O60476 641 aa12.43□□□□□ -0.42
APOC1-209ENST00000592885 CLEC3AO75596 197 aa12.43□□□□□ -0.42
APOC1-209ENST00000592885 SLC25A12O75746 678 aa12.43□□□□□ -0.42
APOC1-209ENST00000592885 WISP3O95389 354 aaPredicted RBP12.43□□□□□ -0.42
APOC1-209ENST00000592885 NME2P22392 152 aa12.43□□□□□ -0.42
APOC1-209ENST00000592885 TPP2P29144 1249 aaPredicted RBP12.43□□□□□ -0.42
APOC1-209ENST00000592885 GGT5P36269 586 aa12.43□□□□□ -0.42
APOC1-209ENST00000592885 RPL21P46778 160 aaKnown RBP12.43□□□□□ -0.42
APOC1-209ENST00000592885 CYB561P49447 251 aa12.43□□□□□ -0.42
APOC1-209ENST00000592885 MLF1P58340 268 aa12.43□□□□□ -0.42
APOC1-209ENST00000592885 CALCOCO2Q13137 446 aa12.43□□□□□ -0.42
APOC1-209ENST00000592885 SLBPQ14493 270 aaKnown RBP eCLIP12.43□□□□□ -0.42
APOC1-209ENST00000592885 ZNF460Q14592 562 aa12.43□□□□□ -0.42
APOC1-209ENST00000592885 NAA30Q147X3 362 aaPredicted RBP12.43□□□□□ -0.42
APOC1-209ENST00000592885 TGFBIQ15582 683 aa12.43□□□□□ -0.42
APOC1-209ENST00000592885 SPINK14Q6IE38 97 aa12.43□□□□□ -0.42
APOC1-209ENST00000592885 SLC25A25Q6KCM7 469 aa12.43□□□□□ -0.42
APOC1-209ENST00000592885 XKRXQ6PP77 449 aa12.43□□□□□ -0.42
APOC1-209ENST00000592885 TMIGD1Q6UXZ0 262 aa12.43□□□□□ -0.42
APOC1-209ENST00000592885 CYS1Q717R9 158 aa12.43□□□□□ -0.42
APOC1-209ENST00000592885 GALNTL5Q7Z4T8 443 aa12.43□□□□□ -0.42
APOC1-209ENST00000592885 CEP97Q8IW35 865 aa12.43□□□□□ -0.42
APOC1-209ENST00000592885 POGLUT1Q8NBL1 392 aa12.43□□□□□ -0.42
APOC1-209ENST00000592885 NFAM1Q8NET5 270 aaPredicted RBP12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms