RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 CCDC68Q9H2F9 335 aa8.93□□□□□ -0.98
BRCA1-226ENST00000591534 TREX1Q9NSU2 369 aa8.93□□□□□ -0.98
BRCA1-226ENST00000591534 ZDHHC18Q9NUE0 388 aa8.93□□□□□ -0.98
BRCA1-226ENST00000591534 GRHL1Q9NZI5 618 aa8.93□□□□□ -0.98
BRCA1-226ENST00000591534 MARCH4Q9P2E8 410 aaPredicted RBP8.93□□□□□ -0.98
BRCA1-226ENST00000591534 TXNDC16Q9P2K2 825 aa8.93□□□□□ -0.98
BRCA1-226ENST00000591534 RUVBL1Q9Y265 456 aaKnown RBP8.93□□□□□ -0.98
BRCA1-226ENST00000591534 PCDHGB6Q9Y5F9 930 aa8.93□□□□□ -0.98
BRCA1-226ENST00000591534 NFS1Q9Y697 457 aa8.93□□□□□ -0.98
BRCA1-226ENST00000591534 ABCA12Q86UK0 2595 aa8.93□□□□□ -0.98
BRCA1-226ENST00000591534 A0A1W2PPV9 198 aa8.92□□□□□ -0.98
BRCA1-226ENST00000591534 E7ESA3 106 aa8.92□□□□□ -0.98
BRCA1-226ENST00000591534 MYO1CO00159 1063 aa8.92□□□□□ -0.98
BRCA1-226ENST00000591534 ZBTB14O43829 449 aa8.92□□□□□ -0.98
BRCA1-226ENST00000591534 AVILO75366 819 aa8.92□□□□□ -0.98
BRCA1-226ENST00000591534 VAPBO95292 243 aa8.92□□□□□ -0.98
BRCA1-226ENST00000591534 WDPCPO95876 746 aa8.92□□□□□ -0.98
BRCA1-226ENST00000591534 NUDT17P0C025 328 aa8.92□□□□□ -0.98
BRCA1-226ENST00000591534 ERGP11308 486 aa8.92□□□□□ -0.98
BRCA1-226ENST00000591534 OGNP20774 298 aaKnown RBP8.92□□□□□ -0.98
BRCA1-226ENST00000591534 CNTFP26441 200 aa8.92□□□□□ -0.98
BRCA1-226ENST00000591534 NMBRP28336 390 aa8.92□□□□□ -0.98
BRCA1-226ENST00000591534 CA7P43166 264 aa8.92□□□□□ -0.98
BRCA1-226ENST00000591534 MAGEA4P43358 317 aa8.92□□□□□ -0.98
BRCA1-226ENST00000591534 AGTR2P50052 363 aa8.92□□□□□ -0.98
BRCA1-226ENST00000591534 PNLIPRP1P54315 467 aa8.92□□□□□ -0.98
BRCA1-226ENST00000591534 RIPPLY3P57055 190 aa8.92□□□□□ -0.98
BRCA1-226ENST00000591534 SNRPNP63162 240 aaKnown RBP8.92□□□□□ -0.98
BRCA1-226ENST00000591534 SKP1P63208 163 aa8.92□□□□□ -0.98
BRCA1-226ENST00000591534 KCNJ11Q14654 390 aa8.92□□□□□ -0.98
BRCA1-226ENST00000591534 CASP8Q14790 479 aa8.92□□□□□ -0.98
BRCA1-226ENST00000591534 RASA2Q15283 850 aa8.92□□□□□ -0.98
BRCA1-226ENST00000591534 EXT1Q16394 746 aa8.92□□□□□ -0.98
BRCA1-226ENST00000591534 ZNF630Q2M218 657 aaPredicted RBP8.92□□□□□ -0.98
BRCA1-226ENST00000591534 CCSMST1Q4G0I0 132 aa8.92□□□□□ -0.98
BRCA1-226ENST00000591534 MFSD4BQ5TF39 518 aa8.92□□□□□ -0.98
BRCA1-226ENST00000591534 ICE2Q659A1 982 aa8.92□□□□□ -0.98
BRCA1-226ENST00000591534 FAAH2Q6GMR7 532 aa8.92□□□□□ -0.98
BRCA1-226ENST00000591534 TMEM205Q6UW68 189 aa8.92□□□□□ -0.98
BRCA1-226ENST00000591534 NEK10Q6ZWH5 1172 aa8.92□□□□□ -0.98
BRCA1-226ENST00000591534 PAQR7Q86WK9 346 aa8.92□□□□□ -0.98
BRCA1-226ENST00000591534 CCDC25Q86WR0 208 aa8.92□□□□□ -0.98
BRCA1-226ENST00000591534 TMEM151BQ8IW70 566 aa8.92□□□□□ -0.98
BRCA1-226ENST00000591534 FAM98AQ8NCA5 519 aaKnown RBP8.92□□□□□ -0.98
BRCA1-226ENST00000591534 UBLCP1Q8WVY7 318 aaPredicted RBP8.92□□□□□ -0.98
BRCA1-226ENST00000591534 ITLN2Q8WWU7 325 aaPredicted RBP8.92□□□□□ -0.98
BRCA1-226ENST00000591534 CCDC120Q96HB5 630 aa8.92□□□□□ -0.98
BRCA1-226ENST00000591534 SEC16BQ96JE7 1060 aa8.92□□□□□ -0.98
BRCA1-226ENST00000591534 TAAR6Q96RI8 345 aa8.92□□□□□ -0.98
BRCA1-226ENST00000591534 CYTH2Q99418 400 aa8.92□□□□□ -0.98
BRCA1-226ENST00000591534 KIFC1Q9BW19 673 aa8.92□□□□□ -0.98
BRCA1-226ENST00000591534 INTS10Q9NVR2 710 aaKnown RBP8.92□□□□□ -0.98
BRCA1-226ENST00000591534 SYBUQ9NX95 663 aa8.92□□□□□ -0.98
BRCA1-226ENST00000591534 SENP1Q9P0U3 644 aa8.92□□□□□ -0.98
BRCA1-226ENST00000591534 KLHL42Q9P2K6 505 aa8.92□□□□□ -0.98
BRCA1-226ENST00000591534 TAC3Q9UHF0 121 aa8.92□□□□□ -0.98
BRCA1-226ENST00000591534 CACNA1DQ01668 2161 aa8.92□□□□□ -0.98
BRCA1-226ENST00000591534 A0A0A6YYC8 382 aaPredicted RBP8.91□□□□□ -0.98
BRCA1-226ENST00000591534 ESYT3A0FGR9 886 aa8.91□□□□□ -0.98
BRCA1-226ENST00000591534 A8MUI8 341 aa8.91□□□□□ -0.98
BRCA1-226ENST00000591534 GOLGA8KD6RF30 607 aa8.91□□□□□ -0.98
BRCA1-226ENST00000591534 GOLGA8TH3BQL2 631 aa8.91□□□□□ -0.98
BRCA1-226ENST00000591534 I3L1I5 382 aaPredicted RBP8.91□□□□□ -0.98
BRCA1-226ENST00000591534 SLC19A2O60779 497 aa8.91□□□□□ -0.98
BRCA1-226ENST00000591534 PSIP1O75475 530 aaKnown RBP8.91□□□□□ -0.98
BRCA1-226ENST00000591534 SYF2O95926 243 aaKnown RBP8.91□□□□□ -0.98
BRCA1-226ENST00000591534 ITGAMP11215 1152 aa8.91□□□□□ -0.98
BRCA1-226ENST00000591534 ENO3P13929 434 aaPredicted RBP8.91□□□□□ -0.98
BRCA1-226ENST00000591534 PRF1P14222 555 aa8.91□□□□□ -0.98
BRCA1-226ENST00000591534 PGAM1P18669 254 aa8.91□□□□□ -0.98
BRCA1-226ENST00000591534 IL10P22301 178 aa8.91□□□□□ -0.98
BRCA1-226ENST00000591534 MGAT1P26572 445 aa8.91□□□□□ -0.98
BRCA1-226ENST00000591534 SSTR2P30874 369 aa8.91□□□□□ -0.98
BRCA1-226ENST00000591534 GRK3P35626 688 aa8.91□□□□□ -0.98
BRCA1-226ENST00000591534 TAS2R50P59544 299 aa8.91□□□□□ -0.98
BRCA1-226ENST00000591534 RPS15AP62244 130 aaKnown RBP8.91□□□□□ -0.98
BRCA1-226ENST00000591534 PDIA2Q13087 525 aaKnown RBP8.91□□□□□ -0.98
BRCA1-226ENST00000591534 FASTKQ14296 549 aaKnown RBP8.91□□□□□ -0.98
BRCA1-226ENST00000591534 PCOLCEQ15113 449 aa8.91□□□□□ -0.98
BRCA1-226ENST00000591534 MEP1AQ16819 746 aa8.91□□□□□ -0.98
BRCA1-226ENST00000591534 TYSND1Q2T9J0 566 aa8.91□□□□□ -0.98
BRCA1-226ENST00000591534 HKDC1Q2TB90 917 aa8.91□□□□□ -0.98
BRCA1-226ENST00000591534 BTBD16Q32M84 506 aa8.91□□□□□ -0.98
BRCA1-226ENST00000591534 MINDY4Q4G0A6 757 aa8.91□□□□□ -0.98
BRCA1-226ENST00000591534 ZNF766Q5HY98 468 aa8.91□□□□□ -0.98
BRCA1-226ENST00000591534 CTSL3PQ5NE16 218 aa8.91□□□□□ -0.98
BRCA1-226ENST00000591534 PLAG1Q6DJT9 500 aa8.91□□□□□ -0.98
BRCA1-226ENST00000591534 ZNF425Q6IV72 752 aa8.91□□□□□ -0.98
BRCA1-226ENST00000591534 LRRC8EQ6NSJ5 796 aa8.91□□□□□ -0.98
BRCA1-226ENST00000591534 NIPAL1Q6NVV3 410 aa8.91□□□□□ -0.98
BRCA1-226ENST00000591534 CASC4Q6P4E1 433 aa8.91□□□□□ -0.98
BRCA1-226ENST00000591534 SUSD1Q6UWL2 747 aa8.91□□□□□ -0.98
BRCA1-226ENST00000591534 CPEB2Q7Z5Q1 589 aaKnown RBP8.91□□□□□ -0.98
BRCA1-226ENST00000591534 ZBED8Q8IZ13 594 aa8.91□□□□□ -0.98
BRCA1-226ENST00000591534 AGGF1Q8N302 714 aaeCLIP8.91□□□□□ -0.98
BRCA1-226ENST00000591534 SVOPQ8N4V2 548 aa8.91□□□□□ -0.98
BRCA1-226ENST00000591534 DTWD1Q8N5C7 304 aa8.91□□□□□ -0.98
BRCA1-226ENST00000591534 SLC5A8Q8N695 610 aa8.91□□□□□ -0.98
BRCA1-226ENST00000591534 ARFGAP2Q8N6H7 521 aa8.91□□□□□ -0.98
BRCA1-226ENST00000591534 AMER3Q8N944 861 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms