RNA–Protein interactions for RNA: ENST00000590843.1

SEH1L-208, Transcript of SEH1 like nucleoporin, humanhuman

TSL 1 (best)

Gene SEH1L, Length 5,206 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEH1L-208ENST00000590843 ARL8BQ9NVJ2 186 aa10.98□□□□□ -0.65
SEH1L-208ENST00000590843 A0A1B0GX78 115 aa10.97□□□□□ -0.65
SEH1L-208ENST00000590843 CCL22O00626 93 aa10.97□□□□□ -0.65
SEH1L-208ENST00000590843 SNRPB2P08579 225 aaKnown RBP10.97□□□□□ -0.65
SEH1L-208ENST00000590843 FASP25445 335 aa10.97□□□□□ -0.65
SEH1L-208ENST00000590843 EPHA8P29322 1005 aaPredicted RBP10.97□□□□□ -0.65
SEH1L-208ENST00000590843 RAB39AQ14964 217 aa10.97□□□□□ -0.65
SEH1L-208ENST00000590843 SLC5A9Q2M3M2 681 aa10.97□□□□□ -0.65
SEH1L-208ENST00000590843 SLC35G1Q2M3R5 365 aa10.97□□□□□ -0.65
SEH1L-208ENST00000590843 IL17RCQ8NAC3 791 aa10.97□□□□□ -0.65
SEH1L-208ENST00000590843 PIH1D2Q8WWB5 315 aa10.97□□□□□ -0.65
SEH1L-208ENST00000590843 NKD1Q969G9 470 aa10.97□□□□□ -0.65
SEH1L-208ENST00000590843 MFSD3Q96ES6 412 aa10.97□□□□□ -0.65
SEH1L-208ENST00000590843 THOC3Q96J01 351 aaKnown RBP10.97□□□□□ -0.65
SEH1L-208ENST00000590843 DERL2Q9GZP9 239 aa10.97□□□□□ -0.65
SEH1L-208ENST00000590843 KLHL1Q9NR64 748 aa10.97□□□□□ -0.65
SEH1L-208ENST00000590843 KLHL42Q9P2K6 505 aa10.97□□□□□ -0.65
SEH1L-208ENST00000590843 IKZF2Q9UKS7 526 aa10.97□□□□□ -0.65
SEH1L-208ENST00000590843 PCDHGA6Q9Y5G7 932 aa10.97□□□□□ -0.65
SEH1L-208ENST00000590843 PLSCR5A0PG75 271 aa10.97□□□□□ -0.65
SEH1L-208ENST00000590843 RTCAO00442 366 aaKnown RBP10.97□□□□□ -0.65
SEH1L-208ENST00000590843 KLK1P06870 262 aa10.97□□□□□ -0.65
SEH1L-208ENST00000590843 CLRN1P58418 232 aa10.97□□□□□ -0.65
SEH1L-208ENST00000590843 ERV3-1Q14264 604 aa10.97□□□□□ -0.65
SEH1L-208ENST00000590843 PTCHD3Q3KNS1 767 aa10.97□□□□□ -0.65
SEH1L-208ENST00000590843 LARP4Q71RC2 724 aaKnown RBP eCLIP10.97□□□□□ -0.65
SEH1L-208ENST00000590843 RASGEF1CQ8N431 466 aa10.97□□□□□ -0.65
SEH1L-208ENST00000590843 GAL3ST3Q96A11 431 aa10.97□□□□□ -0.65
SEH1L-208ENST00000590843 WASF3Q9UPY6 502 aa10.97□□□□□ -0.65
SEH1L-208ENST00000590843 IFT52Q9Y366 437 aa10.97□□□□□ -0.65
SEH1L-208ENST00000590843 WDR90Q96KV7 1748 aa10.97□□□□□ -0.65
SEH1L-208ENST00000590843 LOC102723532A0A0G2JNH3 316 aa10.97□□□□□ -0.65
SEH1L-208ENST00000590843 TRBV11-1A0A0K0K1C0 115 aa10.97□□□□□ -0.65
SEH1L-208ENST00000590843 NUAK1O60285 661 aa10.97□□□□□ -0.65
SEH1L-208ENST00000590843 CSTBP04080 98 aaKnown RBP10.97□□□□□ -0.65
SEH1L-208ENST00000590843 CAPN1P07384 714 aa10.97□□□□□ -0.65
SEH1L-208ENST00000590843 LINC00032P0C843 101 aa10.97□□□□□ -0.65
SEH1L-208ENST00000590843 HNF1AP20823 631 aa10.97□□□□□ -0.65
SEH1L-208ENST00000590843 PCMT1P22061 227 aa10.97□□□□□ -0.65
SEH1L-208ENST00000590843 AK4P27144 223 aaPredicted RBP10.97□□□□□ -0.65
SEH1L-208ENST00000590843 SLC1A2P43004 574 aa10.97□□□□□ -0.65
SEH1L-208ENST00000590843 MRPL58Q14197 206 aaKnown RBP10.97□□□□□ -0.65
SEH1L-208ENST00000590843 NFE2L1Q14494 772 aa10.97□□□□□ -0.65
SEH1L-208ENST00000590843 TBCELQ5QJ74 424 aa10.97□□□□□ -0.65
SEH1L-208ENST00000590843 DHFR2Q86XF0 187 aa10.97□□□□□ -0.65
SEH1L-208ENST00000590843 DUSP15Q9H1R2 295 aaPredicted RBP10.97□□□□□ -0.65
SEH1L-208ENST00000590843 FAIMQ9NVQ4 179 aa10.97□□□□□ -0.65
SEH1L-208ENST00000590843 LDLRP01130 860 aa10.97□□□□□ -0.65
SEH1L-208ENST00000590843 PENKP01210 267 aaPredicted RBP10.97□□□□□ -0.65
SEH1L-208ENST00000590843 COX6B1P14854 86 aa10.97□□□□□ -0.65
SEH1L-208ENST00000590843 SLC6A8P48029 635 aa10.97□□□□□ -0.65
SEH1L-208ENST00000590843 TCP10LQ8TDR4 215 aa10.97□□□□□ -0.65
SEH1L-208ENST00000590843 FUCA2Q9BTY2 467 aa10.97□□□□□ -0.65
SEH1L-208ENST00000590843 PPM1HQ9ULR3 514 aa10.97□□□□□ -0.65
SEH1L-208ENST00000590843 MAP4K5Q9Y4K4 846 aa10.97□□□□□ -0.65
SEH1L-208ENST00000590843 KCTD3Q9Y597 815 aa10.97□□□□□ -0.65
SEH1L-208ENST00000590843 TJP1Q07157 1748 aa10.96□□□□□ -0.65
SEH1L-208ENST00000590843 CXorf51AA0A1B0GTR3 108 aa10.96□□□□□ -0.65
SEH1L-208ENST00000590843 ZNF860A6NHJ4 632 aa10.96□□□□□ -0.65
SEH1L-208ENST00000590843 HSD11B1P28845 292 aa10.96□□□□□ -0.65
SEH1L-208ENST00000590843 S100A5P33763 92 aa10.96□□□□□ -0.65
SEH1L-208ENST00000590843 GRIA3P42263 894 aa10.96□□□□□ -0.65
SEH1L-208ENST00000590843 XCR1P46094 333 aa10.96□□□□□ -0.65
SEH1L-208ENST00000590843 CD47Q08722 323 aa10.96□□□□□ -0.65
SEH1L-208ENST00000590843 RPE65Q16518 533 aa10.96□□□□□ -0.65
SEH1L-208ENST00000590843 ZNF662Q6ZS27 426 aa10.96□□□□□ -0.65
SEH1L-208ENST00000590843 OR1J2Q8NGS2 313 aa10.96□□□□□ -0.65
SEH1L-208ENST00000590843 OR4C6Q8NH72 309 aa10.96□□□□□ -0.65
SEH1L-208ENST00000590843 THAP4Q8WY91 577 aa10.96□□□□□ -0.65
SEH1L-208ENST00000590843 RNFT2Q96EX2 444 aa10.96□□□□□ -0.65
SEH1L-208ENST00000590843 CCDC167Q9P0B6 97 aa10.96□□□□□ -0.65
SEH1L-208ENST00000590843 SNX11Q9Y5W9 270 aa10.96□□□□□ -0.65
SEH1L-208ENST00000590843 ZBTB42B2RXF5 422 aa10.96□□□□□ -0.65
SEH1L-208ENST00000590843 H0Y8X5 98 aa10.96□□□□□ -0.65
SEH1L-208ENST00000590843 CHRNB2P17787 502 aa10.96□□□□□ -0.65
SEH1L-208ENST00000590843 ACSL1P33121 698 aa10.96□□□□□ -0.65
SEH1L-208ENST00000590843 KIR2DL3P43628 341 aa10.96□□□□□ -0.65
SEH1L-208ENST00000590843 PPP3R1P63098 170 aa10.96□□□□□ -0.65
SEH1L-208ENST00000590843 ADAM17P78536 824 aa10.96□□□□□ -0.65
SEH1L-208ENST00000590843 ARMC4Q5T2S8 1044 aa10.96□□□□□ -0.65
SEH1L-208ENST00000590843 PAQR3Q6TCH7 311 aa10.96□□□□□ -0.65
SEH1L-208ENST00000590843 NXPE4Q6UWF7 544 aa10.96□□□□□ -0.65
SEH1L-208ENST00000590843 B3GNT9Q6UX72 402 aa10.96□□□□□ -0.65
SEH1L-208ENST00000590843 ISLR2Q6UXK2 745 aa10.96□□□□□ -0.65
SEH1L-208ENST00000590843 BTLAQ7Z6A9 289 aa10.96□□□□□ -0.65
SEH1L-208ENST00000590843 TMEM173Q86WV6 379 aaPredicted RBP10.96□□□□□ -0.65
SEH1L-208ENST00000590843 ZNF595Q8IYB9 648 aa10.96□□□□□ -0.65
SEH1L-208ENST00000590843 PPP1R35Q8TAP8 253 aa10.96□□□□□ -0.65
SEH1L-208ENST00000590843 CRYGNQ8WXF5 182 aa10.96□□□□□ -0.65
SEH1L-208ENST00000590843 HS6ST2Q96MM7 605 aa10.96□□□□□ -0.65
SEH1L-208ENST00000590843 RBCK1Q9BYM8 510 aa10.96□□□□□ -0.65
SEH1L-208ENST00000590843 MTG2Q9H4K7 406 aa10.96□□□□□ -0.65
SEH1L-208ENST00000590843 LIPT1Q9Y234 373 aa10.96□□□□□ -0.65
SEH1L-208ENST00000590843 CDC123O75794 336 aaPredicted RBP10.96□□□□□ -0.66
SEH1L-208ENST00000590843 NUDT17P0C025 328 aa10.96□□□□□ -0.66
SEH1L-208ENST00000590843 BLMHQ13867 455 aa10.96□□□□□ -0.66
SEH1L-208ENST00000590843 GPR68Q15743 365 aa10.96□□□□□ -0.66
SEH1L-208ENST00000590843 WDR53Q7Z5U6 358 aaPredicted RBP10.96□□□□□ -0.66
SEH1L-208ENST00000590843 PLD3Q8IV08 490 aa10.96□□□□□ -0.66
SEH1L-208ENST00000590843 PM20D2Q8IYS1 436 aa10.96□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms