RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-228ENST00000590347 A0A075B6Q4 140 aa14.61□□□□□ -0.07
CIRBP-228ENST00000590347 GLTPD2A6NH11 291 aa14.61□□□□□ -0.07
CIRBP-228ENST00000590347 H3BRB1 525 aa14.61□□□□□ -0.07
CIRBP-228ENST00000590347 NDUFA2O43678 99 aa14.61□□□□□ -0.07
CIRBP-228ENST00000590347 MAFKO60675 156 aa14.61□□□□□ -0.07
CIRBP-228ENST00000590347 KERAO60938 352 aa14.61□□□□□ -0.07
CIRBP-228ENST00000590347 HSPA7P48741 367 aa14.61□□□□□ -0.07
CIRBP-228ENST00000590347 LIMK1P53667 647 aa14.61□□□□□ -0.07
CIRBP-228ENST00000590347 KIAA0040Q15053 153 aa14.61□□□□□ -0.07
CIRBP-228ENST00000590347 SF1Q15637 639 aaKnown RBP14.61□□□□□ -0.07
CIRBP-228ENST00000590347 MTFR2Q6P444 385 aa14.61□□□□□ -0.07
CIRBP-228ENST00000590347 ZNF621Q6ZSS3 439 aa14.61□□□□□ -0.07
CIRBP-228ENST00000590347 STK40Q8N2I9 435 aa14.61□□□□□ -0.07
CIRBP-228ENST00000590347 ANKRD53Q8N9V6 530 aa14.61□□□□□ -0.07
CIRBP-228ENST00000590347 EXOC2Q96KP1 924 aa14.61□□□□□ -0.07
CIRBP-228ENST00000590347 CD244Q9BZW8 370 aa14.61□□□□□ -0.07
CIRBP-228ENST00000590347 MROH8Q9H579 483 aa14.61□□□□□ -0.07
CIRBP-228ENST00000590347 ZCCHC4Q9H5U6 513 aa14.61□□□□□ -0.07
CIRBP-228ENST00000590347 C3orf14Q9HBI5 128 aa14.61□□□□□ -0.07
CIRBP-228ENST00000590347 UXTQ9UBK9 157 aaPredicted RBP14.61□□□□□ -0.07
CIRBP-228ENST00000590347 EXO1Q9UQ84 846 aaKnown RBP14.61□□□□□ -0.07
CIRBP-228ENST00000590347 KLK4Q9Y5K2 254 aa14.61□□□□□ -0.07
CIRBP-228ENST00000590347 ARNTLO00327 626 aa14.61□□□□□ -0.07
CIRBP-228ENST00000590347 PRRG1O14668 218 aa14.61□□□□□ -0.07
CIRBP-228ENST00000590347 ADAMDEC1O15204 470 aa14.61□□□□□ -0.07
CIRBP-228ENST00000590347 NCAM2O15394 837 aa14.61□□□□□ -0.07
CIRBP-228ENST00000590347 CHP2O43745 196 aa14.61□□□□□ -0.07
CIRBP-228ENST00000590347 HBP1O60381 514 aa14.61□□□□□ -0.07
CIRBP-228ENST00000590347 CELF2O95319 508 aaKnown RBP14.61□□□□□ -0.07
CIRBP-228ENST00000590347 C22orf31O95567 290 aa14.61□□□□□ -0.07
CIRBP-228ENST00000590347 SLC10A7Q0GE19 358 aa14.61□□□□□ -0.07
CIRBP-228ENST00000590347 LGALSLQ3ZCW2 172 aaPredicted RBP14.61□□□□□ -0.07
CIRBP-228ENST00000590347 OR4F3Q6IEY1 312 aa14.61□□□□□ -0.07
CIRBP-228ENST00000590347 TMPRSS9Q7Z410 1059 aa14.61□□□□□ -0.07
CIRBP-228ENST00000590347 GPAT4Q86UL3 456 aa14.61□□□□□ -0.07
CIRBP-228ENST00000590347 ARHGAP12Q8IWW6 846 aa14.61□□□□□ -0.07
CIRBP-228ENST00000590347 MS4A15Q8N5U1 240 aa14.61□□□□□ -0.07
CIRBP-228ENST00000590347 NELL1Q92832 810 aa14.61□□□□□ -0.07
CIRBP-228ENST00000590347 RANBP3Q9H6Z4 567 aaPredicted RBP14.61□□□□□ -0.07
CIRBP-228ENST00000590347 SLC28A3Q9HAS3 691 aa14.61□□□□□ -0.07
CIRBP-228ENST00000590347 RBFOX1Q9NWB1 397 aaKnown RBP14.61□□□□□ -0.07
CIRBP-228ENST00000590347 TRPM5Q9NZQ8 1165 aa14.61□□□□□ -0.07
CIRBP-228ENST00000590347 ING4Q9UNL4 249 aa14.61□□□□□ -0.07
CIRBP-228ENST00000590347 DLGAP4Q9Y2H0 992 aa14.61□□□□□ -0.07
CIRBP-228ENST00000590347 PADI2Q9Y2J8 665 aa14.61□□□□□ -0.07
CIRBP-228ENST00000590347 A0A1W2PPL8 197 aa14.6□□□□□ -0.07
CIRBP-228ENST00000590347 LANCL1O43813 399 aa14.6□□□□□ -0.07
CIRBP-228ENST00000590347 VPS26AO75436 327 aa14.6□□□□□ -0.07
CIRBP-228ENST00000590347 KDM4BO94953 1096 aa14.6□□□□□ -0.07
CIRBP-228ENST00000590347 APOC3P02656 99 aa14.6□□□□□ -0.07
CIRBP-228ENST00000590347 PEPDP12955 493 aa14.6□□□□□ -0.07
CIRBP-228ENST00000590347 PTPRNQ16849 979 aa14.6□□□□□ -0.07
CIRBP-228ENST00000590347 XKRXQ6PP77 449 aa14.6□□□□□ -0.07
CIRBP-228ENST00000590347 KRT74Q7RTS7 529 aa14.6□□□□□ -0.07
CIRBP-228ENST00000590347 C1GALT1C1Q96EU7 318 aa14.6□□□□□ -0.07
CIRBP-228ENST00000590347 PTPN18Q99952 460 aa14.6□□□□□ -0.07
CIRBP-228ENST00000590347 APOL5Q9BWW9 433 aa14.6□□□□□ -0.07
CIRBP-228ENST00000590347 CLEC4AQ9UMR7 237 aa14.6□□□□□ -0.07
CIRBP-228ENST00000590347 OR5K4A6NMS3 321 aa14.6□□□□□ -0.07
CIRBP-228ENST00000590347 E2F3O00716 465 aa14.6□□□□□ -0.07
CIRBP-228ENST00000590347 ORC5O43913 435 aa14.6□□□□□ -0.07
CIRBP-228ENST00000590347 NDUFS6O75380 124 aaKnown RBP14.6□□□□□ -0.07
CIRBP-228ENST00000590347 WISP3O95389 354 aaPredicted RBP14.6□□□□□ -0.07
CIRBP-228ENST00000590347 PRAMEF1O95521 474 aa14.6□□□□□ -0.07
CIRBP-228ENST00000590347 SNAI1O95863 264 aaPredicted RBP14.6□□□□□ -0.07
CIRBP-228ENST00000590347 PSMA1P25786 263 aaKnown RBP14.6□□□□□ -0.07
CIRBP-228ENST00000590347 CRYBB2P43320 205 aa14.6□□□□□ -0.07
CIRBP-228ENST00000590347 GBX2P52951 348 aaPredicted RBP14.6□□□□□ -0.07
CIRBP-228ENST00000590347 GPR139Q6DWJ6 353 aa14.6□□□□□ -0.07
CIRBP-228ENST00000590347 GPSM1Q86YR5 675 aa14.6□□□□□ -0.07
CIRBP-228ENST00000590347 IFNL1Q8IU54 200 aa14.6□□□□□ -0.07
CIRBP-228ENST00000590347 LRRC17Q8N6Y2 441 aa14.6□□□□□ -0.07
CIRBP-228ENST00000590347 COQ8AQ8NI60 647 aa14.6□□□□□ -0.07
CIRBP-228ENST00000590347 LINGO1Q96FE5 620 aa14.6□□□□□ -0.07
CIRBP-228ENST00000590347 GPR137Q96N19 417 aa14.6□□□□□ -0.07
CIRBP-228ENST00000590347 RRASP10301 218 aa14.59□□□□□ -0.07
CIRBP-228ENST00000590347 PRKAR1AP10644 381 aa14.59□□□□□ -0.07
CIRBP-228ENST00000590347 VIPR1P32241 457 aa14.59□□□□□ -0.07
CIRBP-228ENST00000590347 SRP9P49458 86 aaKnown RBP14.59□□□□□ -0.07
CIRBP-228ENST00000590347 SLC14A2Q15849 920 aa14.59□□□□□ -0.07
CIRBP-228ENST00000590347 ZSWIM7Q19AV6 140 aa14.59□□□□□ -0.07
CIRBP-228ENST00000590347 TIMM50Q3ZCQ8 353 aa14.59□□□□□ -0.07
CIRBP-228ENST00000590347 FBXO43Q4G163 708 aa14.59□□□□□ -0.07
CIRBP-228ENST00000590347 SIRPB2Q5JXA9 342 aa14.59□□□□□ -0.07
CIRBP-228ENST00000590347 IL20RBQ6UXL0 311 aa14.59□□□□□ -0.07
CIRBP-228ENST00000590347 PTCHD4Q6ZW05 846 aa14.59□□□□□ -0.07
CIRBP-228ENST00000590347 PLPPR4Q7Z2D5 763 aa14.59□□□□□ -0.07
CIRBP-228ENST00000590347 FAM124AQ86V42 546 aa14.59□□□□□ -0.07
CIRBP-228ENST00000590347 LIX1LQ8IVB5 337 aa14.59□□□□□ -0.07
CIRBP-228ENST00000590347 AADATQ8N5Z0 425 aa14.59□□□□□ -0.07
CIRBP-228ENST00000590347 CELF5Q8N6W0 485 aaKnown RBP14.59□□□□□ -0.07
CIRBP-228ENST00000590347 OR52P1PQ8NH57 321 aa14.59□□□□□ -0.07
CIRBP-228ENST00000590347 CREB3L4Q8TEY5 395 aa14.59□□□□□ -0.07
CIRBP-228ENST00000590347 KIAA1191Q96A73 305 aa14.59□□□□□ -0.07
CIRBP-228ENST00000590347 ZNF416Q9BWM5 594 aa14.59□□□□□ -0.07
CIRBP-228ENST00000590347 ZNF768Q9H5H4 540 aaKnown RBP14.59□□□□□ -0.07
CIRBP-228ENST00000590347 NUDT15Q9NV35 164 aa14.59□□□□□ -0.07
CIRBP-228ENST00000590347 PLEKHB1Q9UF11 243 aaPredicted RBP14.59□□□□□ -0.07
CIRBP-228ENST00000590347 UBQLN2Q9UHD9 624 aa14.59□□□□□ -0.07
CIRBP-228ENST00000590347 FBXL2Q9UKC9 423 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms