RNA–Protein interactions for RNA: ENST00000589577.1

VPS25-204, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 5

Gene VPS25, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-204ENST00000589577 SIAH2O43255 324 aa5.68□□□□□ -1.5
VPS25-204ENST00000589577 FOXS1O43638 330 aa5.68□□□□□ -1.5
VPS25-204ENST00000589577 PEX1O43933 1283 aa5.68□□□□□ -1.5
VPS25-204ENST00000589577 SRPX2O60687 465 aaPredicted RBP5.68□□□□□ -1.5
VPS25-204ENST00000589577 SRP72O76094 671 aaKnown RBP5.68□□□□□ -1.5
VPS25-204ENST00000589577 AGTP01019 485 aa5.68□□□□□ -1.5
VPS25-204ENST00000589577 BMP5P22003 454 aa5.68□□□□□ -1.5
VPS25-204ENST00000589577 ADRA1DP25100 572 aa5.68□□□□□ -1.5
VPS25-204ENST00000589577 PSMB5P28074 263 aa5.68□□□□□ -1.5
VPS25-204ENST00000589577 TRHRP34981 398 aaPredicted RBP5.68□□□□□ -1.5
VPS25-204ENST00000589577 PTH2RP49190 550 aa5.68□□□□□ -1.5
VPS25-204ENST00000589577 CYB561P49447 251 aa5.68□□□□□ -1.5
VPS25-204ENST00000589577 NR1H2P55055 460 aa5.68□□□□□ -1.5
VPS25-204ENST00000589577 MRPS25P82663 173 aaKnown RBP5.68□□□□□ -1.5
VPS25-204ENST00000589577 XIAPP98170 497 aa5.68□□□□□ -1.5
VPS25-204ENST00000589577 ILF2Q12905 390 aaKnown RBP5.68□□□□□ -1.5
VPS25-204ENST00000589577 PDIA2Q13087 525 aaKnown RBP5.68□□□□□ -1.5
VPS25-204ENST00000589577 RPA4Q13156 261 aa5.68□□□□□ -1.5
VPS25-204ENST00000589577 THOC5Q13769 683 aaKnown RBP5.68□□□□□ -1.5
VPS25-204ENST00000589577 GRB7Q14451 532 aa5.68□□□□□ -1.5
VPS25-204ENST00000589577 SPARCL1Q14515 664 aa5.68□□□□□ -1.5
VPS25-204ENST00000589577 POU6F1Q14863 301 aa5.68□□□□□ -1.5
VPS25-204ENST00000589577 TAF1AQ15573 450 aaPredicted RBP5.68□□□□□ -1.5
VPS25-204ENST00000589577 ERCC6LQ2NKX8 1250 aa5.68□□□□□ -1.5
VPS25-204ENST00000589577 MUM1Q2TAK8 710 aa5.68□□□□□ -1.5
VPS25-204ENST00000589577 CHRFAM7AQ494W8 412 aa5.68□□□□□ -1.5
VPS25-204ENST00000589577 CCDC38Q502W7 563 aa5.68□□□□□ -1.5
VPS25-204ENST00000589577 PDLIM3Q53GG5 364 aaPredicted RBP5.68□□□□□ -1.5
VPS25-204ENST00000589577 AARS2Q5JTZ9 985 aaKnown RBP5.68□□□□□ -1.5
VPS25-204ENST00000589577 PCID2Q5JVF3 399 aa5.68□□□□□ -1.5
VPS25-204ENST00000589577 SIRPB2Q5JXA9 342 aa5.68□□□□□ -1.5
VPS25-204ENST00000589577 C1orf185Q5T7R7 199 aa5.68□□□□□ -1.5
VPS25-204ENST00000589577 WDR93Q6P2C0 686 aa5.68□□□□□ -1.5
VPS25-204ENST00000589577 EMBQ6PCB8 327 aa5.68□□□□□ -1.5
VPS25-204ENST00000589577 RNF44Q7L0R7 432 aa5.68□□□□□ -1.5
VPS25-204ENST00000589577 MDGA2Q7Z553 956 aa5.68□□□□□ -1.5
VPS25-204ENST00000589577 ANKRD37Q7Z713 158 aa5.68□□□□□ -1.5
VPS25-204ENST00000589577 PRUNE1Q86TP1 453 aa5.68□□□□□ -1.5
VPS25-204ENST00000589577 TAX1BP1Q86VP1 789 aa5.68□□□□□ -1.5
VPS25-204ENST00000589577 TBC1D21Q8IYX1 336 aa5.68□□□□□ -1.5
VPS25-204ENST00000589577 ZBED8Q8IZ13 594 aa5.68□□□□□ -1.5
VPS25-204ENST00000589577 KIF2BQ8N4N8 673 aa5.68□□□□□ -1.5
VPS25-204ENST00000589577 SLC5A8Q8N695 610 aa5.68□□□□□ -1.5
VPS25-204ENST00000589577 NAT8LQ8N9F0 302 aa5.68□□□□□ -1.5
VPS25-204ENST00000589577 OR52K1Q8NGK4 314 aa5.68□□□□□ -1.5
VPS25-204ENST00000589577 M1APQ8TC57 530 aa5.68□□□□□ -1.5
VPS25-204ENST00000589577 FBXO25Q8TCJ0 367 aa5.68□□□□□ -1.5
VPS25-204ENST00000589577 CALML6Q8TD86 181 aa5.68□□□□□ -1.5
VPS25-204ENST00000589577 STYXQ8WUJ0 223 aa5.68□□□□□ -1.5
VPS25-204ENST00000589577 SMPDL3BQ92485 455 aa5.68□□□□□ -1.5
VPS25-204ENST00000589577 PEX13Q92968 403 aa5.68□□□□□ -1.5
VPS25-204ENST00000589577 SERPINB12Q96P63 405 aa5.68□□□□□ -1.5
VPS25-204ENST00000589577 IL17FQ96PD4 163 aa5.68□□□□□ -1.5
VPS25-204ENST00000589577 SMC6Q96SB8 1091 aa5.68□□□□□ -1.5
VPS25-204ENST00000589577 CYTH2Q99418 400 aa5.68□□□□□ -1.5
VPS25-204ENST00000589577 YIPF4Q9BSR8 244 aa5.68□□□□□ -1.5
VPS25-204ENST00000589577 YIPF2Q9BWQ6 316 aa5.68□□□□□ -1.5
VPS25-204ENST00000589577 GSX2Q9BZM3 304 aa5.68□□□□□ -1.5
VPS25-204ENST00000589577 CDCP1Q9H5V8 836 aa5.68□□□□□ -1.5
VPS25-204ENST00000589577 VPS37BQ9H9H4 285 aa5.68□□□□□ -1.5
VPS25-204ENST00000589577 ARNT2Q9HBZ2 717 aa5.68□□□□□ -1.5
VPS25-204ENST00000589577 SAYSD1Q9NPB0 183 aa5.68□□□□□ -1.5
VPS25-204ENST00000589577 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.68□□□□□ -1.5
VPS25-204ENST00000589577 CIDEBQ9UHD4 219 aa5.68□□□□□ -1.5
VPS25-204ENST00000589577 DMGDHQ9UI17 866 aaKnown RBP5.68□□□□□ -1.5
VPS25-204ENST00000589577 NFU1Q9UMS0 254 aa5.68□□□□□ -1.5
VPS25-204ENST00000589577 KLF13Q9Y2Y9 288 aaPredicted RBP5.68□□□□□ -1.5
VPS25-204ENST00000589577 IKBKGQ9Y6K9 419 aa5.68□□□□□ -1.5
VPS25-204ENST00000589577 FAM169AQ9Y6X4 670 aa5.68□□□□□ -1.5
VPS25-204ENST00000589577 V9GYY5 206 aaPredicted RBP5.68□□□□□ -1.5
VPS25-204ENST00000589577 FREM3P0C091 2139 aa5.68□□□□□ -1.5
VPS25-204ENST00000589577 IGLV3-16A0A075B6K0 115 aa5.67□□□□□ -1.5
VPS25-204ENST00000589577 A0A0A6YYC8 382 aaPredicted RBP5.67□□□□□ -1.5
VPS25-204ENST00000589577 A0A0G2JMM0 328 aa5.67□□□□□ -1.5
VPS25-204ENST00000589577 A0A1B0GVC2 190 aa5.67□□□□□ -1.5
VPS25-204ENST00000589577 A0A1W2PPB8 328 aa5.67□□□□□ -1.5
VPS25-204ENST00000589577 A0A1W2PRS3 328 aa5.67□□□□□ -1.5
VPS25-204ENST00000589577 CCDC151A5D8V7 595 aa5.67□□□□□ -1.5
VPS25-204ENST00000589577 OR14I1A6ND48 311 aa5.67□□□□□ -1.5
VPS25-204ENST00000589577 FAM166BA8MTA8 275 aa5.67□□□□□ -1.5
VPS25-204ENST00000589577 KIR3DP1A8MWS1 328 aa5.67□□□□□ -1.5
VPS25-204ENST00000589577 CFAP99D6REC4 459 aa5.67□□□□□ -1.5
VPS25-204ENST00000589577 RNF223E7ERA6 249 aa5.67□□□□□ -1.5
VPS25-204ENST00000589577 I3L1I5 382 aaPredicted RBP5.67□□□□□ -1.5
VPS25-204ENST00000589577 BCKDKO14874 412 aa5.67□□□□□ -1.5
VPS25-204ENST00000589577 SLC16A5O15375 505 aa5.67□□□□□ -1.5
VPS25-204ENST00000589577 TLX2O43763 284 aaPredicted RBP5.67□□□□□ -1.5
VPS25-204ENST00000589577 CD5LO43866 347 aa5.67□□□□□ -1.5
VPS25-204ENST00000589577 IGHG3P01860 377 aa5.67□□□□□ -1.5
VPS25-204ENST00000589577 EIF2S1P05198 315 aaKnown RBP5.67□□□□□ -1.5
VPS25-204ENST00000589577 CELA3AP09093 270 aa5.67□□□□□ -1.5
VPS25-204ENST00000589577 GSTA2P09210 222 aa5.67□□□□□ -1.5
VPS25-204ENST00000589577 RALBP11234 206 aa5.67□□□□□ -1.5
VPS25-204ENST00000589577 ATP1B2P14415 290 aaPredicted RBP5.67□□□□□ -1.5
VPS25-204ENST00000589577 PGAM1P18669 254 aa5.67□□□□□ -1.5
VPS25-204ENST00000589577 ITGALP20701 1170 aa5.67□□□□□ -1.5
VPS25-204ENST00000589577 ENDOUP21128 410 aaKnown RBP5.67□□□□□ -1.5
VPS25-204ENST00000589577 CD9P21926 228 aa5.67□□□□□ -1.5
VPS25-204ENST00000589577 MGAT1P26572 445 aa5.67□□□□□ -1.5
VPS25-204ENST00000589577 STX2P32856 288 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms