RNA–Protein interactions for RNA: ENST00000589445.1

R3HDM4-205, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 705 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-205ENST00000589445 KRT6CP48668 564 aa21.31■■□□□ 1
R3HDM4-205ENST00000589445 PLA2G16P53816 162 aa21.31■■□□□ 1
R3HDM4-205ENST00000589445 WDR4P57081 412 aaKnown RBP21.31■■□□□ 1
R3HDM4-205ENST00000589445 SKP1P63208 163 aa21.31■■□□□ 1
R3HDM4-205ENST00000589445 HYAL2Q12891 473 aa21.31■■□□□ 1
R3HDM4-205ENST00000589445 SRSF6Q13247 344 aaKnown RBP21.31■■□□□ 1
R3HDM4-205ENST00000589445 DNASE1L3Q13609 305 aa21.31■■□□□ 1
R3HDM4-205ENST00000589445 MLIPQ5VWP3 458 aa21.31■■□□□ 1
R3HDM4-205ENST00000589445 TRIM40Q6P9F5 258 aa21.31■■□□□ 1
R3HDM4-205ENST00000589445 LRRC69Q6ZNQ3 347 aa21.31■■□□□ 1
R3HDM4-205ENST00000589445 CUZD1Q86UP6 607 aa21.31■■□□□ 1
R3HDM4-205ENST00000589445 WDR20Q8TBZ3 569 aa21.31■■□□□ 1
R3HDM4-205ENST00000589445 UTP15Q8TED0 518 aaKnown RBP21.31■■□□□ 1
R3HDM4-205ENST00000589445 SELENOMQ8WWX9 145 aa21.31■■□□□ 1
R3HDM4-205ENST00000589445 MVB12AQ96EY5 273 aa21.31■■□□□ 1
R3HDM4-205ENST00000589445 CMTM7Q96FZ5 175 aa21.31■■□□□ 1
R3HDM4-205ENST00000589445 FAR2Q96K12 515 aa21.31■■□□□ 1
R3HDM4-205ENST00000589445 CNDP1Q96KN2 507 aa21.31■■□□□ 1
R3HDM4-205ENST00000589445 F2RL3Q96RI0 385 aa21.31■■□□□ 1
R3HDM4-205ENST00000589445 CENPKQ9BS16 269 aa21.31■■□□□ 1
R3HDM4-205ENST00000589445 OR51B5Q9H339 312 aa21.31■■□□□ 1
R3HDM4-205ENST00000589445 EML4Q9HC35 981 aaKnown RBP21.31■■□□□ 1
R3HDM4-205ENST00000589445 ZNF304Q9HCX3 659 aa21.31■■□□□ 1
R3HDM4-205ENST00000589445 FARSBQ9NSD9 589 aaKnown RBP21.31■■□□□ 1
R3HDM4-205ENST00000589445 HCN3Q9P1Z3 774 aa21.31■■□□□ 1
R3HDM4-205ENST00000589445 TIMM22Q9Y584 194 aa21.31■■□□□ 1
R3HDM4-205ENST00000589445 LRIT2A6NDA9 550 aa21.3■■□□□ 1
R3HDM4-205ENST00000589445 TAF4O00268 1085 aa21.3■■□□□ 1
R3HDM4-205ENST00000589445 MANBAO00462 879 aa21.3■■□□□ 1
R3HDM4-205ENST00000589445 DYNC1I1O14576 645 aa21.3■■□□□ 1
R3HDM4-205ENST00000589445 FOXS1O43638 330 aa21.3■■□□□ 1
R3HDM4-205ENST00000589445 HSPA4LO95757 839 aa21.3■■□□□ 1
R3HDM4-205ENST00000589445 LIFP15018 202 aa21.3■■□□□ 1
R3HDM4-205ENST00000589445 EIF2S3P41091 472 aaKnown RBP21.3■■□□□ 1
R3HDM4-205ENST00000589445 PIK3CBP42338 1070 aa21.3■■□□□ 1
R3HDM4-205ENST00000589445 HTR6P50406 440 aa21.3■■□□□ 1
R3HDM4-205ENST00000589445 SLC18A1P54219 525 aa21.3■■□□□ 1
R3HDM4-205ENST00000589445 FOXA1P55317 472 aa21.3■■□□□ 1
R3HDM4-205ENST00000589445 TGM3Q08188 693 aa21.3■■□□□ 1
R3HDM4-205ENST00000589445 FAM53BQ14153 422 aa21.3■■□□□ 1
R3HDM4-205ENST00000589445 NCF4Q15080 339 aa21.3■■□□□ 1
R3HDM4-205ENST00000589445 ARL13AQ5H913 290 aaPredicted RBP21.3■■□□□ 1
R3HDM4-205ENST00000589445 PDSS2Q86YH6 399 aa21.3■■□□□ 1
R3HDM4-205ENST00000589445 MS4A6EQ96DS6 147 aa21.3■■□□□ 1
R3HDM4-205ENST00000589445 AICDAQ9GZX7 198 aa21.3■■□□□ 1
R3HDM4-205ENST00000589445 CTSFQ9UBX1 484 aa21.3■■□□□ 1
R3HDM4-205ENST00000589445 SLC22A7Q9Y694 548 aa21.3■■□□□ 1
R3HDM4-205ENST00000589445 H3BQF6 201 aa21.29■■□□□ 1
R3HDM4-205ENST00000589445 NSA2O95478 260 aaKnown RBP21.29■■□□□ 1
R3HDM4-205ENST00000589445 PDYNP01213 254 aa21.29■■□□□ 1
R3HDM4-205ENST00000589445 PIM1P11309 404 aaPredicted RBP21.29■■□□□ 1
R3HDM4-205ENST00000589445 SERPINB5P36952 375 aa21.29■■□□□ 1
R3HDM4-205ENST00000589445 PPP2R2AP63151 447 aa21.29■■□□□ 1
R3HDM4-205ENST00000589445 OLR1P78380 273 aa21.29■■□□□ 1
R3HDM4-205ENST00000589445 MAT1AQ00266 395 aaKnown RBP21.29■■□□□ 1
R3HDM4-205ENST00000589445 DSG2Q14126 1118 aa21.29■■□□□ 1
R3HDM4-205ENST00000589445 SYT16Q17RD7 645 aa21.29■■□□□ 1
R3HDM4-205ENST00000589445 KHDRBS2Q5VWX1 349 aaKnown RBP21.29■■□□□ 1
R3HDM4-205ENST00000589445 CLEC6AQ6EIG7 209 aa21.29■■□□□ 1
R3HDM4-205ENST00000589445 COX15Q7KZN9 410 aa21.29■■□□□ 1
R3HDM4-205ENST00000589445 SPACA3Q8IXA5 215 aa21.29■■□□□ 1
R3HDM4-205ENST00000589445 ENDOVQ8N8Q3 282 aaKnown RBP21.29■■□□□ 1
R3HDM4-205ENST00000589445 OR2L5Q8NG80 312 aa21.29■■□□□ 1
R3HDM4-205ENST00000589445 DPH1Q9BZG8 443 aa21.29■■□□□ 1
R3HDM4-205ENST00000589445 TNFRSF12AQ9NP84 129 aa21.29■■□□□ 1
R3HDM4-205ENST00000589445 TRPC4Q9UBN4 977 aa21.29■■□□□ 1
R3HDM4-205ENST00000589445 PADI2Q9Y2J8 665 aa21.29■■□□□ 1
R3HDM4-205ENST00000589445 TSC22D4Q9Y3Q8 395 aa21.29■■□□□ 1
R3HDM4-205ENST00000589445 CELSR3Q9NYQ7 3312 aa21.28■■□□□ 1
R3HDM4-205ENST00000589445 CCDC88CQ9P219 2028 aa21.28■■□□□ 1
R3HDM4-205ENST00000589445 A0A088AWK7 358 aa21.28■■□□□ 1
R3HDM4-205ENST00000589445 TMEM114B3SHH9 223 aa21.28■■□□□ 1
R3HDM4-205ENST00000589445 GALR3O60755 368 aaPredicted RBP21.28■■□□□ 1
R3HDM4-205ENST00000589445 LYPLA1O75608 230 aaPredicted RBP21.28■■□□□ 1
R3HDM4-205ENST00000589445 TBX6O95947 436 aaPredicted RBP21.28■■□□□ 1
R3HDM4-205ENST00000589445 NR1D1P20393 614 aa21.28■■□□□ 1
R3HDM4-205ENST00000589445 ZNF10P21506 573 aaPredicted RBP21.28■■□□□ 1
R3HDM4-205ENST00000589445 SSR2P43308 183 aa21.28■■□□□ 1
R3HDM4-205ENST00000589445 RPS18P62269 152 aaKnown RBP21.28■■□□□ 1
R3HDM4-205ENST00000589445 RPS15P62841 145 aaKnown RBP21.28■■□□□ 1
R3HDM4-205ENST00000589445 BTN3A2P78410 334 aa21.28■■□□□ 1
R3HDM4-205ENST00000589445 TMEM35AQ53FP2 167 aa21.28■■□□□ 1
R3HDM4-205ENST00000589445 SH2D4BQ5SQS7 431 aa21.28■■□□□ 1
R3HDM4-205ENST00000589445 C10orf62Q5T681 223 aaPredicted RBP21.28■■□□□ 1
R3HDM4-205ENST00000589445 BROXQ5VW32 411 aa21.28■■□□□ 1
R3HDM4-205ENST00000589445 CHSY3Q70JA7 882 aa21.28■■□□□ 1
R3HDM4-205ENST00000589445 AFAP1L2Q8N4X5 818 aa21.28■■□□□ 1
R3HDM4-205ENST00000589445 DYDC1Q8WWB3 177 aa21.28■■□□□ 1
R3HDM4-205ENST00000589445 FKBP10Q96AY3 582 aa21.28■■□□□ 1
R3HDM4-205ENST00000589445 RBCK1Q9BYM8 510 aa21.28■■□□□ 1
R3HDM4-205ENST00000589445 SLC12A4Q9UP95 1085 aa21.28■■□□□ 1
R3HDM4-205ENST00000589445 MRPS18BQ9Y676 258 aaKnown RBP21.28■■□□□ 1
R3HDM4-205ENST00000589445 TMEM233B4DJY2 109 aa21.27■■□□□ 1
R3HDM4-205ENST00000589445 C21orf140B9A014 251 aa21.27■■□□□ 1
R3HDM4-205ENST00000589445 H0YIG0 161 aa21.27■■□□□ 1
R3HDM4-205ENST00000589445 RTCAO00442 366 aaKnown RBP21.27■■□□□ 1
R3HDM4-205ENST00000589445 AZIN1O14977 448 aa21.27■■□□□ 1
R3HDM4-205ENST00000589445 CERS1P27544 350 aa21.27■■□□□ 1
R3HDM4-205ENST00000589445 ADPRMQ3LIE5 342 aa21.27■■□□□ 1
R3HDM4-205ENST00000589445 CES4AQ5XG92 561 aa21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms