RNA–Protein interactions for RNA: ENST00000588917.2

CIRBP-220, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-220ENST00000588917 SNRNP200O75643 2136 aaKnown RBP18.59■□□□□ 0.57
CIRBP-220ENST00000588917 A0A1B0GTL3 188 aa18.59■□□□□ 0.57
CIRBP-220ENST00000588917 SERTM1A2A2V5 107 aa18.59■□□□□ 0.57
CIRBP-220ENST00000588917 C9J4A7 227 aa18.59■□□□□ 0.57
CIRBP-220ENST00000588917 FFAR3O14843 346 aa18.59■□□□□ 0.57
CIRBP-220ENST00000588917 GPR42O15529 346 aa18.59■□□□□ 0.57
CIRBP-220ENST00000588917 HSPA4LO95757 839 aa18.59■□□□□ 0.57
CIRBP-220ENST00000588917 TGFB1P01137 390 aa18.59■□□□□ 0.57
CIRBP-220ENST00000588917 ALBP02768 609 aa18.59■□□□□ 0.57
CIRBP-220ENST00000588917 SMIM10L1P0DMW3 83 aa18.59■□□□□ 0.57
CIRBP-220ENST00000588917 NR1D1P20393 614 aa18.59■□□□□ 0.57
CIRBP-220ENST00000588917 TSFMP43897 325 aaKnown RBP18.59■□□□□ 0.57
CIRBP-220ENST00000588917 ABCE1P61221 599 aaKnown RBP18.59■□□□□ 0.57
CIRBP-220ENST00000588917 C1orf189Q5VU69 101 aa18.59■□□□□ 0.57
CIRBP-220ENST00000588917 KHDRBS2Q5VWX1 349 aaKnown RBP18.59■□□□□ 0.57
CIRBP-220ENST00000588917 AFAP1L2Q8N4X5 818 aa18.59■□□□□ 0.57
CIRBP-220ENST00000588917 DYDC1Q8WWB3 177 aa18.59■□□□□ 0.57
CIRBP-220ENST00000588917 KCNE4Q8WWG9 221 aa18.59■□□□□ 0.57
CIRBP-220ENST00000588917 COL26A1Q96A83 441 aa18.59■□□□□ 0.57
CIRBP-220ENST00000588917 RGMAQ96B86 450 aa18.59■□□□□ 0.57
CIRBP-220ENST00000588917 MS4A6EQ96DS6 147 aa18.59■□□□□ 0.57
CIRBP-220ENST00000588917 MMABQ96EY8 250 aaPredicted RBP18.59■□□□□ 0.57
CIRBP-220ENST00000588917 SMIM10Q96HG1 83 aa18.59■□□□□ 0.57
CIRBP-220ENST00000588917 KCNC2Q96PR1 638 aa18.59■□□□□ 0.57
CIRBP-220ENST00000588917 TBCDQ9BTW9 1192 aa18.59■□□□□ 0.57
CIRBP-220ENST00000588917 GPR87Q9BY21 358 aa18.59■□□□□ 0.57
CIRBP-220ENST00000588917 ILKAPQ9H0C8 392 aaPredicted RBP18.59■□□□□ 0.57
CIRBP-220ENST00000588917 MANSC1Q9H8J5 431 aa18.59■□□□□ 0.57
CIRBP-220ENST00000588917 DMRT3Q9NQL9 472 aa18.59■□□□□ 0.57
CIRBP-220ENST00000588917 INTS9Q9NV88 658 aaKnown RBP18.59■□□□□ 0.57
CIRBP-220ENST00000588917 IFT80Q9P2H3 777 aaPredicted RBP18.59■□□□□ 0.57
CIRBP-220ENST00000588917 KCND3Q9UK17 655 aa18.59■□□□□ 0.57
CIRBP-220ENST00000588917 HEATR5BQ9P2D3 2071 aa18.59■□□□□ 0.57
CIRBP-220ENST00000588917 SMG1Q96Q15 3661 aaKnown RBP18.58■□□□□ 0.57
CIRBP-220ENST00000588917 MAGEB17A8MXT2 336 aa18.58■□□□□ 0.56
CIRBP-220ENST00000588917 C21orf140B9A014 251 aa18.58■□□□□ 0.56
CIRBP-220ENST00000588917 MANBAO00462 879 aa18.58■□□□□ 0.56
CIRBP-220ENST00000588917 AZIN1O14977 448 aa18.58■□□□□ 0.56
CIRBP-220ENST00000588917 STATHP02808 62 aa18.58■□□□□ 0.56
CIRBP-220ENST00000588917 RAB40ALP0C0E4 278 aa18.58■□□□□ 0.56
CIRBP-220ENST00000588917 ZNF888P0CJ79 500 aaPredicted RBP18.58■□□□□ 0.56
CIRBP-220ENST00000588917 TCN2P20062 427 aa18.58■□□□□ 0.56
CIRBP-220ENST00000588917 BGNP21810 368 aa18.58■□□□□ 0.56
CIRBP-220ENST00000588917 STAT5AP42229 794 aa18.58■□□□□ 0.56
CIRBP-220ENST00000588917 SLC1A6P48664 564 aa18.58■□□□□ 0.56
CIRBP-220ENST00000588917 NEK2P51955 445 aa18.58■□□□□ 0.56
CIRBP-220ENST00000588917 RPS13P62277 151 aaKnown RBP18.58■□□□□ 0.56
CIRBP-220ENST00000588917 RPS15P62841 145 aaKnown RBP18.58■□□□□ 0.56
CIRBP-220ENST00000588917 CSTF3Q12996 717 aaKnown RBP18.58■□□□□ 0.56
CIRBP-220ENST00000588917 ZNF385CQ66K41 422 aaPredicted RBP18.58■□□□□ 0.56
CIRBP-220ENST00000588917 DCBLD2Q96PD2 775 aa18.58■□□□□ 0.56
CIRBP-220ENST00000588917 F2RL3Q96RI0 385 aa18.58■□□□□ 0.56
CIRBP-220ENST00000588917 KLHL31Q9H511 634 aa18.58■□□□□ 0.56
CIRBP-220ENST00000588917 TRAF6Q9Y4K3 522 aa18.58■□□□□ 0.56
CIRBP-220ENST00000588917 TIMM22Q9Y584 194 aa18.58■□□□□ 0.56
CIRBP-220ENST00000588917 A0A0A6YYC8 382 aaPredicted RBP18.57■□□□□ 0.56
CIRBP-220ENST00000588917 TEX51A0A1B0GUA7 166 aa18.57■□□□□ 0.56
CIRBP-220ENST00000588917 I3L1I5 382 aaPredicted RBP18.57■□□□□ 0.56
CIRBP-220ENST00000588917 KLF11O14901 512 aa18.57■□□□□ 0.56
CIRBP-220ENST00000588917 ERI3O43414 337 aaKnown RBP18.57■□□□□ 0.56
CIRBP-220ENST00000588917 FOXS1O43638 330 aa18.57■□□□□ 0.56
CIRBP-220ENST00000588917 GALR3O60755 368 aaPredicted RBP18.57■□□□□ 0.56
CIRBP-220ENST00000588917 PDYNP01213 254 aa18.57■□□□□ 0.56
CIRBP-220ENST00000588917 CHN1P15882 459 aa18.57■□□□□ 0.56
CIRBP-220ENST00000588917 IL10P22301 178 aa18.57■□□□□ 0.56
CIRBP-220ENST00000588917 HNRNPH1P31943 449 aaKnown RBP18.57■□□□□ 0.56
CIRBP-220ENST00000588917 RAP1GDS1P52306 607 aa18.57■□□□□ 0.56
CIRBP-220ENST00000588917 RAB8AP61006 207 aa18.57■□□□□ 0.56
CIRBP-220ENST00000588917 DSG2Q14126 1118 aa18.57■□□□□ 0.56
CIRBP-220ENST00000588917 AP5B1Q2VPB7 878 aa18.57■□□□□ 0.56
CIRBP-220ENST00000588917 SGO1Q5FBB7 561 aa18.57■□□□□ 0.56
CIRBP-220ENST00000588917 LRRC69Q6ZNQ3 347 aa18.57■□□□□ 0.56
CIRBP-220ENST00000588917 OVCH1Q7RTY7 1134 aa18.57■□□□□ 0.56
CIRBP-220ENST00000588917 OR9A4Q8NGU2 314 aa18.57■□□□□ 0.56
CIRBP-220ENST00000588917 ZCCHC10Q8TBK6 192 aa18.57■□□□□ 0.56
CIRBP-220ENST00000588917 FKBP10Q96AY3 582 aa18.57■□□□□ 0.56
CIRBP-220ENST00000588917 CCT7Q99832 543 aa18.57■□□□□ 0.56
CIRBP-220ENST00000588917 NPLQ9BXD5 320 aaPredicted RBP18.57■□□□□ 0.56
CIRBP-220ENST00000588917 CHST8Q9H2A9 424 aa18.57■□□□□ 0.56
CIRBP-220ENST00000588917 OR51B5Q9H339 312 aa18.57■□□□□ 0.56
CIRBP-220ENST00000588917 COPS7BQ9H9Q2 264 aaPredicted RBP18.57■□□□□ 0.56
CIRBP-220ENST00000588917 THAP1Q9NVV9 213 aa18.57■□□□□ 0.56
CIRBP-220ENST00000588917 NAALAD2Q9Y3Q0 740 aa18.57■□□□□ 0.56
CIRBP-220ENST00000588917 EIF4E1BA6NMX2 242 aaKnown RBP18.56■□□□□ 0.56
CIRBP-220ENST00000588917 TLX3O43711 291 aaPredicted RBP18.56■□□□□ 0.56
CIRBP-220ENST00000588917 KLHL18O94889 574 aa18.56■□□□□ 0.56
CIRBP-220ENST00000588917 SEMA3DO95025 777 aa18.56■□□□□ 0.56
CIRBP-220ENST00000588917 TBX6O95947 436 aaPredicted RBP18.56■□□□□ 0.56
CIRBP-220ENST00000588917 CHRNGP07510 517 aa18.56■□□□□ 0.56
CIRBP-220ENST00000588917 FBLP22087 321 aaKnown RBP18.56■□□□□ 0.56
CIRBP-220ENST00000588917 EIF2S3P41091 472 aaKnown RBP18.56■□□□□ 0.56
CIRBP-220ENST00000588917 CCR10P46092 362 aa18.56■□□□□ 0.56
CIRBP-220ENST00000588917 OR1D4P47884 311 aa18.56■□□□□ 0.56
CIRBP-220ENST00000588917 PLA2G16P53816 162 aa18.56■□□□□ 0.56
CIRBP-220ENST00000588917 BTN3A2P78410 334 aa18.56■□□□□ 0.56
CIRBP-220ENST00000588917 OCA2Q04671 838 aa18.56■□□□□ 0.56
CIRBP-220ENST00000588917 DEFB134Q4QY38 66 aa18.56■□□□□ 0.56
CIRBP-220ENST00000588917 ARHGAP40Q5TG30 622 aa18.56■□□□□ 0.56
CIRBP-220ENST00000588917 MLIPQ5VWP3 458 aa18.56■□□□□ 0.56
CIRBP-220ENST00000588917 OR4C11Q6IEV9 310 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms