RNA–Protein interactions for RNA: ENST00000588542.5

DDX39A-207, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 1,297 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-207ENST00000588542 ZNF225Q9UK10 706 aa19.12■□□□□ 0.65
DDX39A-207ENST00000588542 RALYQ9UKM9 306 aaKnown RBP19.12■□□□□ 0.65
DDX39A-207ENST00000588542 TSC22D4Q9Y3Q8 395 aa19.12■□□□□ 0.65
DDX39A-207ENST00000588542 CTIFO43310 598 aaKnown RBP19.11■□□□□ 0.65
DDX39A-207ENST00000588542 BMP10O95393 424 aa19.11■□□□□ 0.65
DDX39A-207ENST00000588542 MYL2P10916 166 aa19.11■□□□□ 0.65
DDX39A-207ENST00000588542 CLCQ05315 142 aa19.11■□□□□ 0.65
DDX39A-207ENST00000588542 CPSF6Q16630 551 aaKnown RBP eCLIP19.11■□□□□ 0.65
DDX39A-207ENST00000588542 MRGPREQ86SM8 312 aa19.11■□□□□ 0.65
DDX39A-207ENST00000588542 RAB43Q86YS6 212 aa19.11■□□□□ 0.65
DDX39A-207ENST00000588542 OR4F6Q8NGB9 312 aa19.11■□□□□ 0.65
DDX39A-207ENST00000588542 HUS1BQ8NHY5 278 aa19.11■□□□□ 0.65
DDX39A-207ENST00000588542 WDR20Q8TBZ3 569 aa19.11■□□□□ 0.65
DDX39A-207ENST00000588542 ATP6V1E2Q96A05 226 aa19.11■□□□□ 0.65
DDX39A-207ENST00000588542 QRFPRQ96P65 431 aa19.11■□□□□ 0.65
DDX39A-207ENST00000588542 F2RL3Q96RI0 385 aa19.11■□□□□ 0.65
DDX39A-207ENST00000588542 UBL7Q96S82 380 aaPredicted RBP19.11■□□□□ 0.65
DDX39A-207ENST00000588542 REXO4Q9GZR2 422 aaKnown RBP19.11■□□□□ 0.65
DDX39A-207ENST00000588542 C14orf105Q9NVL8 296 aa19.11■□□□□ 0.65
DDX39A-207ENST00000588542 MAN2B2Q9Y2E5 1009 aa19.11■□□□□ 0.65
DDX39A-207ENST00000588542 PLLPQ9Y342 182 aa19.11■□□□□ 0.65
DDX39A-207ENST00000588542 PCDHGA11Q9Y5H2 935 aa19.11■□□□□ 0.65
DDX39A-207ENST00000588542 ATRXP46100 2492 aa19.11■□□□□ 0.65
DDX39A-207ENST00000588542 BOD1L1Q8NFC6 3051 aa19.1■□□□□ 0.65
DDX39A-207ENST00000588542 A0A0G2JN53 185 aa19.1■□□□□ 0.65
DDX39A-207ENST00000588542 ERI3O43414 337 aaKnown RBP19.1■□□□□ 0.65
DDX39A-207ENST00000588542 SPAG7O75391 227 aa19.1■□□□□ 0.65
DDX39A-207ENST00000588542 JRKO75564 520 aa19.1■□□□□ 0.65
DDX39A-207ENST00000588542 SUPT7LO94864 414 aa19.1■□□□□ 0.65
DDX39A-207ENST00000588542 MMP11P24347 488 aa19.1■□□□□ 0.65
DDX39A-207ENST00000588542 SERPINB1P30740 379 aa19.1■□□□□ 0.65
DDX39A-207ENST00000588542 PIK3CBP42338 1070 aa19.1■□□□□ 0.65
DDX39A-207ENST00000588542 OLR1P78380 273 aa19.1■□□□□ 0.65
DDX39A-207ENST00000588542 ATP1A4Q13733 1029 aa19.1■□□□□ 0.65
DDX39A-207ENST00000588542 ZRSR2Q15696 482 aaKnown RBP19.1■□□□□ 0.65
DDX39A-207ENST00000588542 RBBP7Q16576 425 aa19.1■□□□□ 0.65
DDX39A-207ENST00000588542 TNFAIP8L3Q5GJ75 292 aa19.1■□□□□ 0.65
DDX39A-207ENST00000588542 CEP85LQ5SZL2 805 aa19.1■□□□□ 0.65
DDX39A-207ENST00000588542 NIPAL1Q6NVV3 410 aa19.1■□□□□ 0.65
DDX39A-207ENST00000588542 LRIG3Q6UXM1 1119 aa19.1■□□□□ 0.65
DDX39A-207ENST00000588542 UBE3DQ7Z6J8 389 aa19.1■□□□□ 0.65
DDX39A-207ENST00000588542 OR2L5Q8NG80 312 aa19.1■□□□□ 0.65
DDX39A-207ENST00000588542 RDH11Q8TC12 318 aa19.1■□□□□ 0.65
DDX39A-207ENST00000588542 TRPC4APQ8TEL6 797 aa19.1■□□□□ 0.65
DDX39A-207ENST00000588542 APOBEC4Q8WW27 367 aaKnown RBP19.1■□□□□ 0.65
DDX39A-207ENST00000588542 ZBTB9Q96C00 473 aa19.1■□□□□ 0.65
DDX39A-207ENST00000588542 CCDC126Q96EE4 140 aa19.1■□□□□ 0.65
DDX39A-207ENST00000588542 BBC3Q96PG8 261 aaPredicted RBP19.1■□□□□ 0.65
DDX39A-207ENST00000588542 MESP1Q9BRJ9 268 aa19.1■□□□□ 0.65
DDX39A-207ENST00000588542 CRB3Q9BUF7 120 aa19.1■□□□□ 0.65
DDX39A-207ENST00000588542 GSTO2Q9H4Y5 243 aa19.1■□□□□ 0.65
DDX39A-207ENST00000588542 SEMA3GQ9NS98 782 aa19.1■□□□□ 0.65
DDX39A-207ENST00000588542 ADGRE2Q9UHX3 823 aa19.1■□□□□ 0.65
DDX39A-207ENST00000588542 HS3ST3B1Q9Y662 390 aa19.1■□□□□ 0.65
DDX39A-207ENST00000588542 DOCK10Q96BY6 2186 aa19.09■□□□□ 0.65
DDX39A-207ENST00000588542 IDSB3KWA1 339 aa19.09■□□□□ 0.65
DDX39A-207ENST00000588542 SOCS6O14544 535 aa19.09■□□□□ 0.65
DDX39A-207ENST00000588542 RGS16O15492 202 aaPredicted RBP19.09■□□□□ 0.65
DDX39A-207ENST00000588542 CHST10O43529 356 aa19.09■□□□□ 0.65
DDX39A-207ENST00000588542 TGFB1P01137 390 aa19.09■□□□□ 0.65
DDX39A-207ENST00000588542 CPA3P15088 417 aa19.09■□□□□ 0.65
DDX39A-207ENST00000588542 XCR1P46094 333 aa19.09■□□□□ 0.65
DDX39A-207ENST00000588542 BTN3A2P78410 334 aa19.09■□□□□ 0.65
DDX39A-207ENST00000588542 DDX39BQ13838 428 aaKnown RBP19.09■□□□□ 0.65
DDX39A-207ENST00000588542 GGTA1PQ4G0N0 100 aa19.09■□□□□ 0.65
DDX39A-207ENST00000588542 FAM219BQ5XKK7 198 aa19.09■□□□□ 0.65
DDX39A-207ENST00000588542 CPZQ66K79 652 aa19.09■□□□□ 0.65
DDX39A-207ENST00000588542 LETMD1Q6P1Q0 360 aa19.09■□□□□ 0.65
DDX39A-207ENST00000588542 ABHD17CQ6PCB6 329 aa19.09■□□□□ 0.65
DDX39A-207ENST00000588542 MILR1Q7Z6M3 343 aa19.09■□□□□ 0.65
DDX39A-207ENST00000588542 APLFQ8IW19 511 aaPredicted RBP19.09■□□□□ 0.65
DDX39A-207ENST00000588542 EXD3Q8N9H8 876 aa19.09■□□□□ 0.65
DDX39A-207ENST00000588542 PPP4R1Q8TF05 950 aa19.09■□□□□ 0.65
DDX39A-207ENST00000588542 NACC2Q96BF6 587 aa19.09■□□□□ 0.65
DDX39A-207ENST00000588542 WBP1Q96G27 269 aa19.09■□□□□ 0.65
DDX39A-207ENST00000588542 MTERF1Q99551 399 aaKnown RBP19.09■□□□□ 0.65
DDX39A-207ENST00000588542 CLK4Q9HAZ1 481 aaKnown RBP19.09■□□□□ 0.65
DDX39A-207ENST00000588542 DMRT3Q9NQL9 472 aa19.09■□□□□ 0.65
DDX39A-207ENST00000588542 OXSMQ9NWU1 459 aa19.09■□□□□ 0.65
DDX39A-207ENST00000588542 SLC17A7Q9P2U7 560 aa19.09■□□□□ 0.65
DDX39A-207ENST00000588542 C3orf18Q9UK00 162 aa19.09■□□□□ 0.65
DDX39A-207ENST00000588542 ARGFXA6NJG6 315 aa19.08■□□□□ 0.64
DDX39A-207ENST00000588542 TYROBPO43914 113 aa19.08■□□□□ 0.64
DDX39A-207ENST00000588542 KALRNO60229 2985 aa19.08■□□□□ 0.64
DDX39A-207ENST00000588542 SH3BGRLO75368 114 aa19.08■□□□□ 0.64
DDX39A-207ENST00000588542 OTCP00480 354 aa19.08■□□□□ 0.64
DDX39A-207ENST00000588542 HPDP32754 393 aaPredicted RBP19.08■□□□□ 0.64
DDX39A-207ENST00000588542 ARL1P40616 181 aaPredicted RBP19.08■□□□□ 0.64
DDX39A-207ENST00000588542 CCR10P46092 362 aa19.08■□□□□ 0.64
DDX39A-207ENST00000588542 NEK2P51955 445 aa19.08■□□□□ 0.64
DDX39A-207ENST00000588542 PLA2G16P53816 162 aa19.08■□□□□ 0.64
DDX39A-207ENST00000588542 DNAJB13P59910 316 aa19.08■□□□□ 0.64
DDX39A-207ENST00000588542 SKP1P63208 163 aa19.08■□□□□ 0.64
DDX39A-207ENST00000588542 PCLAFQ15004 111 aa19.08■□□□□ 0.64
DDX39A-207ENST00000588542 DEPDC1Q5TB30 811 aa19.08■□□□□ 0.64
DDX39A-207ENST00000588542 TRIM40Q6P9F5 258 aa19.08■□□□□ 0.64
DDX39A-207ENST00000588542 CCDC63Q8NA47 563 aa19.08■□□□□ 0.64
DDX39A-207ENST00000588542 ARMC2Q8NEN0 867 aa19.08■□□□□ 0.64
DDX39A-207ENST00000588542 REPS1Q96D71 796 aa19.08■□□□□ 0.64
DDX39A-207ENST00000588542 CMTM7Q96FZ5 175 aa19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms