RNA–Protein interactions for RNA: ENST00000588477.5

IFT20-216, Transcript of intraflagellar transport 20, humanhuman

TSL 5 BASIC

Gene IFT20, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-216ENST00000588477 FBXW2Q9UKT8 454 aa14.25□□□□□ -0.13
IFT20-216ENST00000588477 SOX13Q9UN79 622 aa14.25□□□□□ -0.13
IFT20-216ENST00000588477 TRBV11-1A0A0K0K1C0 115 aa14.24□□□□□ -0.13
IFT20-216ENST00000588477 TCRBV16S1A1N1A0A5B0 115 aa14.24□□□□□ -0.13
IFT20-216ENST00000588477 NDUFS4O43181 175 aa14.24□□□□□ -0.13
IFT20-216ENST00000588477 SERPIND1P05546 499 aa14.24□□□□□ -0.13
IFT20-216ENST00000588477 CDH1P12830 882 aa14.24□□□□□ -0.13
IFT20-216ENST00000588477 ENO3P13929 434 aaPredicted RBP14.24□□□□□ -0.13
IFT20-216ENST00000588477 ALOX12P18054 663 aa14.24□□□□□ -0.13
IFT20-216ENST00000588477 ACVR2AP27037 513 aa14.24□□□□□ -0.13
IFT20-216ENST00000588477 CLCN2P51788 898 aa14.24□□□□□ -0.13
IFT20-216ENST00000588477 PPIAP62937 165 aaKnown RBP14.24□□□□□ -0.13
IFT20-216ENST00000588477 MEF2AQ02078 507 aaPredicted RBP14.24□□□□□ -0.13
IFT20-216ENST00000588477 PLGLB1Q02325 96 aa14.24□□□□□ -0.13
IFT20-216ENST00000588477 LTBQ06643 244 aa14.24□□□□□ -0.13
IFT20-216ENST00000588477 SEL1L2Q5TEA6 688 aa14.24□□□□□ -0.13
IFT20-216ENST00000588477 NEPROQ6NW34 567 aa14.24□□□□□ -0.13
IFT20-216ENST00000588477 ARSKQ6UWY0 536 aa14.24□□□□□ -0.13
IFT20-216ENST00000588477 Q71RC1 249 aaPredicted RBP14.24□□□□□ -0.13
IFT20-216ENST00000588477 PIWIL4Q7Z3Z4 852 aaKnown RBP14.24□□□□□ -0.13
IFT20-216ENST00000588477 LIX1LQ8IVB5 337 aa14.24□□□□□ -0.13
IFT20-216ENST00000588477 APCDD1LQ8NCL9 501 aa14.24□□□□□ -0.13
IFT20-216ENST00000588477 RNF214Q8ND24 703 aa14.24□□□□□ -0.13
IFT20-216ENST00000588477 HES6Q96HZ4 224 aa14.24□□□□□ -0.13
IFT20-216ENST00000588477 CLEC4MQ9H2X3 399 aaPredicted RBP14.24□□□□□ -0.13
IFT20-216ENST00000588477 TIMMDC1Q9NPL8 285 aa14.24□□□□□ -0.13
IFT20-216ENST00000588477 NECTIN3Q9NQS3 549 aa14.24□□□□□ -0.13
IFT20-216ENST00000588477 INTS10Q9NVR2 710 aaKnown RBP14.24□□□□□ -0.13
IFT20-216ENST00000588477 VPS9D1Q9Y2B5 631 aa14.24□□□□□ -0.13
IFT20-216ENST00000588477 MED16Q9Y2X0 877 aa14.24□□□□□ -0.13
IFT20-216ENST00000588477 DHRS7Q9Y394 339 aa14.24□□□□□ -0.13
IFT20-216ENST00000588477 DNHD1Q96M86 4753 aa14.24□□□□□ -0.13
IFT20-216ENST00000588477 A0A0G2JNJ9 132 aa14.23□□□□□ -0.13
IFT20-216ENST00000588477 CTAGE9A4FU28 777 aa14.23□□□□□ -0.13
IFT20-216ENST00000588477 PINLYPA6NC86 204 aa14.23□□□□□ -0.13
IFT20-216ENST00000588477 FAM166BA8MTA8 275 aa14.23□□□□□ -0.13
IFT20-216ENST00000588477 SLC16A5O15375 505 aa14.23□□□□□ -0.13
IFT20-216ENST00000588477 OR1F1O43749 312 aa14.23□□□□□ -0.13
IFT20-216ENST00000588477 CEP104O60308 925 aa14.23□□□□□ -0.13
IFT20-216ENST00000588477 TUBB4AP04350 444 aa14.23□□□□□ -0.13
IFT20-216ENST00000588477 ZNF888P0CJ79 500 aaPredicted RBP14.23□□□□□ -0.13
IFT20-216ENST00000588477 DGKQP52824 942 aa14.23□□□□□ -0.13
IFT20-216ENST00000588477 SKP1P63208 163 aa14.23□□□□□ -0.13
IFT20-216ENST00000588477 NAE1Q13564 534 aa14.23□□□□□ -0.13
IFT20-216ENST00000588477 KIAA0930Q6ICG6 404 aaPredicted RBP14.23□□□□□ -0.13
IFT20-216ENST00000588477 ZNF549Q6P9A3 640 aa14.23□□□□□ -0.13
IFT20-216ENST00000588477 AGTRAPQ6RW13 159 aa14.23□□□□□ -0.13
IFT20-216ENST00000588477 LCTLQ6UWM7 567 aa14.23□□□□□ -0.13
IFT20-216ENST00000588477 RAD9BQ6WBX8 426 aa14.23□□□□□ -0.13
IFT20-216ENST00000588477 B3GNT6Q6ZMB0 384 aa14.23□□□□□ -0.13
IFT20-216ENST00000588477 MBOAT1Q6ZNC8 495 aa14.23□□□□□ -0.13
IFT20-216ENST00000588477 KIAA1328Q86T90 577 aa14.23□□□□□ -0.13
IFT20-216ENST00000588477 CPNE9Q8IYJ1 553 aa14.23□□□□□ -0.13
IFT20-216ENST00000588477 PSD4Q8NDX1 1056 aa14.23□□□□□ -0.13
IFT20-216ENST00000588477 B3GNT7Q8NFL0 401 aa14.23□□□□□ -0.13
IFT20-216ENST00000588477 GOT1L1Q8NHS2 421 aaPredicted RBP14.23□□□□□ -0.13
IFT20-216ENST00000588477 ALPK1Q96QP1 1244 aa14.23□□□□□ -0.13
IFT20-216ENST00000588477 GPR21Q99679 349 aa14.23□□□□□ -0.13
IFT20-216ENST00000588477 CCDC68Q9H2F9 335 aa14.23□□□□□ -0.13
IFT20-216ENST00000588477 PRDM9Q9NQV7 894 aa14.23□□□□□ -0.13
IFT20-216ENST00000588477 FBXO6Q9NRD1 293 aaPredicted RBP14.23□□□□□ -0.13
IFT20-216ENST00000588477 RASSF1Q9NS23 344 aa14.23□□□□□ -0.13
IFT20-216ENST00000588477 KLHL42Q9P2K6 505 aa14.23□□□□□ -0.13
IFT20-216ENST00000588477 Q9UFV3 132 aa14.23□□□□□ -0.13
IFT20-216ENST00000588477 ADAMTS6Q9UKP5 1117 aa14.23□□□□□ -0.13
IFT20-216ENST00000588477 EDARQ9UNE0 448 aa14.23□□□□□ -0.13
IFT20-216ENST00000588477 ERVK-11Q9UQG0 969 aa14.23□□□□□ -0.13
IFT20-216ENST00000588477 FIGNL2A6NMB9 653 aa14.22□□□□□ -0.13
IFT20-216ENST00000588477 ACOT7O00154 380 aa14.22□□□□□ -0.13
IFT20-216ENST00000588477 GLI4P10075 376 aa14.22□□□□□ -0.13
IFT20-216ENST00000588477 PAMP19021 973 aa14.22□□□□□ -0.13
IFT20-216ENST00000588477 KIR2DL3P43628 341 aa14.22□□□□□ -0.13
IFT20-216ENST00000588477 SSR4P51571 173 aa14.22□□□□□ -0.13
IFT20-216ENST00000588477 CTBP1Q13363 440 aa14.22□□□□□ -0.13
IFT20-216ENST00000588477 ZNF470Q6ECI4 717 aa14.22□□□□□ -0.13
IFT20-216ENST00000588477 RTL6Q6ICC9 239 aa14.22□□□□□ -0.13
IFT20-216ENST00000588477 KIAA0408Q6ZU52 694 aa14.22□□□□□ -0.13
IFT20-216ENST00000588477 SLC13A5Q86YT5 568 aaPredicted RBP14.22□□□□□ -0.13
IFT20-216ENST00000588477 DENND6AQ8IWF6 608 aa14.22□□□□□ -0.13
IFT20-216ENST00000588477 CD200R1Q8TD46 325 aa14.22□□□□□ -0.13
IFT20-216ENST00000588477 KCNJ9Q92806 393 aa14.22□□□□□ -0.13
IFT20-216ENST00000588477 SMC6Q96SB8 1091 aa14.22□□□□□ -0.13
IFT20-216ENST00000588477 SMR3AQ99954 134 aa14.22□□□□□ -0.13
IFT20-216ENST00000588477 TRIM5Q9C035 493 aa14.22□□□□□ -0.13
IFT20-216ENST00000588477 RHBGQ9H310 441 aa14.22□□□□□ -0.13
IFT20-216ENST00000588477 ZDHHC11Q9H8X9 412 aa14.22□□□□□ -0.13
IFT20-216ENST00000588477 LIN28AQ9H9Z2 209 aaKnown RBP14.22□□□□□ -0.13
IFT20-216ENST00000588477 ZFATQ9P243 1243 aa14.22□□□□□ -0.13
IFT20-216ENST00000588477 PDE10AQ9Y233 779 aa14.22□□□□□ -0.13
IFT20-216ENST00000588477 FAM215AQ9Y5M1 114 aa14.22□□□□□ -0.13
IFT20-216ENST00000588477 LIPGQ9Y5X9 500 aa14.22□□□□□ -0.13
IFT20-216ENST00000588477 NINQ8N4C6 2090 aa14.21□□□□□ -0.13
IFT20-216ENST00000588477 IGKV3D-11A0A0A0MRZ8 115 aa14.21□□□□□ -0.13
IFT20-216ENST00000588477 A8MVJ9 347 aa14.21□□□□□ -0.13
IFT20-216ENST00000588477 BCKDKO14874 412 aa14.21□□□□□ -0.13
IFT20-216ENST00000588477 AVILO75366 819 aa14.21□□□□□ -0.13
IFT20-216ENST00000588477 MYO1DO94832 1006 aa14.21□□□□□ -0.13
IFT20-216ENST00000588477 NPPBP16860 134 aa14.21□□□□□ -0.13
IFT20-216ENST00000588477 TERF1P54274 439 aa14.21□□□□□ -0.13
IFT20-216ENST00000588477 PWP1Q13610 501 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms