RNA–Protein interactions for RNA: ENST00000588131.1

VMP1-207, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-207ENST00000588131 ZCCHC10Q8TBK6 192 aa10.76□□□□□ -0.69
VMP1-207ENST00000588131 UTP15Q8TED0 518 aaKnown RBP10.76□□□□□ -0.69
VMP1-207ENST00000588131 KLHL6Q8WZ60 621 aa10.76□□□□□ -0.69
VMP1-207ENST00000588131 SMIM10Q96HG1 83 aa10.76□□□□□ -0.69
VMP1-207ENST00000588131 NSL1Q96IY1 281 aa10.76□□□□□ -0.69
VMP1-207ENST00000588131 SLC41A2Q96JW4 573 aa10.76□□□□□ -0.69
VMP1-207ENST00000588131 TMEM74Q96NL1 305 aa10.76□□□□□ -0.69
VMP1-207ENST00000588131 CHRNA10Q9GZZ6 450 aa10.76□□□□□ -0.69
VMP1-207ENST00000588131 KCNH6Q9H252 994 aa10.76□□□□□ -0.69
VMP1-207ENST00000588131 PDE7BQ9NP56 450 aa10.76□□□□□ -0.69
VMP1-207ENST00000588131 SLC52A3Q9NQ40 469 aa10.76□□□□□ -0.69
VMP1-207ENST00000588131 PRDM7Q9NQW5 492 aa10.76□□□□□ -0.69
VMP1-207ENST00000588131 AHSPQ9NZD4 102 aa10.76□□□□□ -0.69
VMP1-207ENST00000588131 MCM8Q9UJA3 840 aa10.76□□□□□ -0.69
VMP1-207ENST00000588131 GPR179Q6PRD1 2367 aa10.76□□□□□ -0.69
VMP1-207ENST00000588131 COL27A1Q8IZC6 1860 aaPredicted RBP10.76□□□□□ -0.69
VMP1-207ENST00000588131 MYO15AQ9UKN7 3530 aa10.75□□□□□ -0.69
VMP1-207ENST00000588131 RP1P56715 2156 aa10.75□□□□□ -0.69
VMP1-207ENST00000588131 WDFY4Q6ZS81 3184 aa10.75□□□□□ -0.69
VMP1-207ENST00000588131 A0A0A6YYD5 115 aa10.75□□□□□ -0.69
VMP1-207ENST00000588131 IGHV5-10-1A0A0J9YXX1 117 aa10.75□□□□□ -0.69
VMP1-207ENST00000588131 GNG14A0A1W2PPG7 69 aa10.75□□□□□ -0.69
VMP1-207ENST00000588131 NR5A2O00482 541 aa10.75□□□□□ -0.69
VMP1-207ENST00000588131 NTN3O00634 580 aaPredicted RBP10.75□□□□□ -0.69
VMP1-207ENST00000588131 TMPRSS11DO60235 418 aa10.75□□□□□ -0.69
VMP1-207ENST00000588131 SNRPB2P08579 225 aaKnown RBP10.75□□□□□ -0.69
VMP1-207ENST00000588131 THRAP10827 490 aa10.75□□□□□ -0.69
VMP1-207ENST00000588131 ESRRAP11474 423 aaPredicted RBP10.75□□□□□ -0.69
VMP1-207ENST00000588131 CAPN3P20807 821 aa10.75□□□□□ -0.69
VMP1-207ENST00000588131 SSR2P43308 183 aa10.75□□□□□ -0.69
VMP1-207ENST00000588131 CLDN8P56748 225 aa10.75□□□□□ -0.69
VMP1-207ENST00000588131 STXBP1P61764 594 aaKnown RBP10.75□□□□□ -0.69
VMP1-207ENST00000588131 HSD11B2P80365 405 aa10.75□□□□□ -0.69
VMP1-207ENST00000588131 ZNF763Q0D2J5 394 aa10.75□□□□□ -0.69
VMP1-207ENST00000588131 WASHC2DQ5SRD0 308 aa10.75□□□□□ -0.69
VMP1-207ENST00000588131 CCNYL2Q5T2Q4 361 aa10.75□□□□□ -0.69
VMP1-207ENST00000588131 OR4C11Q6IEV9 310 aa10.75□□□□□ -0.69
VMP1-207ENST00000588131 TMEM214Q6NUQ4 689 aaKnown RBP10.75□□□□□ -0.69
VMP1-207ENST00000588131 TRIM40Q6P9F5 258 aa10.75□□□□□ -0.69
VMP1-207ENST00000588131 BLOC1S3Q6QNY0 202 aa10.75□□□□□ -0.69
VMP1-207ENST00000588131 YTHDF3Q7Z739 585 aaKnown RBP10.75□□□□□ -0.69
VMP1-207ENST00000588131 RIMKLAQ8IXN7 391 aa10.75□□□□□ -0.69
VMP1-207ENST00000588131 D2HGDHQ8N465 521 aa10.75□□□□□ -0.69
VMP1-207ENST00000588131 ARHGEF39Q8N4T4 335 aa10.75□□□□□ -0.69
VMP1-207ENST00000588131 OR4D9Q8NGE8 314 aa10.75□□□□□ -0.69
VMP1-207ENST00000588131 OR8K5Q8NH50 307 aa10.75□□□□□ -0.69
VMP1-207ENST00000588131 FBXO27Q8NI29 283 aa10.75□□□□□ -0.69
VMP1-207ENST00000588131 RP9Q8TA86 221 aaKnown RBP10.75□□□□□ -0.69
VMP1-207ENST00000588131 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.75□□□□□ -0.69
VMP1-207ENST00000588131 C16orf78Q8WTQ4 265 aa10.75□□□□□ -0.69
VMP1-207ENST00000588131 GFM2Q969S9 779 aaKnown RBP10.75□□□□□ -0.69
VMP1-207ENST00000588131 GAL3ST3Q96A11 431 aa10.75□□□□□ -0.69
VMP1-207ENST00000588131 CCDC74BQ96LY2 380 aa10.75□□□□□ -0.69
VMP1-207ENST00000588131 ZNF285Q96NJ3 590 aa10.75□□□□□ -0.69
VMP1-207ENST00000588131 QRFPRQ96P65 431 aa10.75□□□□□ -0.69
VMP1-207ENST00000588131 GFM1Q96RP9 751 aaKnown RBP10.75□□□□□ -0.69
VMP1-207ENST00000588131 PHOX2BQ99453 314 aa10.75□□□□□ -0.69
VMP1-207ENST00000588131 CENPKQ9BS16 269 aa10.75□□□□□ -0.69
VMP1-207ENST00000588131 DPY30Q9C005 99 aa10.75□□□□□ -0.69
VMP1-207ENST00000588131 ZNF768Q9H5H4 540 aaKnown RBP10.75□□□□□ -0.69
VMP1-207ENST00000588131 DDX31Q9H8H2 851 aaKnown RBP10.75□□□□□ -0.69
VMP1-207ENST00000588131 MRGBPQ9NV56 204 aa10.75□□□□□ -0.69
VMP1-207ENST00000588131 PDP2Q9P2J9 529 aa10.75□□□□□ -0.69
VMP1-207ENST00000588131 PLCL2Q9UPR0 1127 aa10.75□□□□□ -0.69
VMP1-207ENST00000588131 EXO1Q9UQ84 846 aaKnown RBP10.75□□□□□ -0.69
VMP1-207ENST00000588131 FAM234BA2RU67 622 aa10.74□□□□□ -0.69
VMP1-207ENST00000588131 ASPDHA6ND91 283 aa10.74□□□□□ -0.69
VMP1-207ENST00000588131 D6RAR5 112 aa10.74□□□□□ -0.69
VMP1-207ENST00000588131 FBP2O00757 339 aa10.74□□□□□ -0.69
VMP1-207ENST00000588131 TOX3O15405 576 aaPredicted RBP10.74□□□□□ -0.69
VMP1-207ENST00000588131 AKAP10O43572 662 aa10.74□□□□□ -0.69
VMP1-207ENST00000588131 SRPX2O60687 465 aaPredicted RBP10.74□□□□□ -0.69
VMP1-207ENST00000588131 KIAA0754O94854 1291 aa10.74□□□□□ -0.69
VMP1-207ENST00000588131 UNC5CO95185 931 aa10.74□□□□□ -0.69
VMP1-207ENST00000588131 MED26O95402 600 aa10.74□□□□□ -0.69
VMP1-207ENST00000588131 GP1BAP07359 652 aa10.74□□□□□ -0.69
VMP1-207ENST00000588131 IL3P08700 152 aa10.74□□□□□ -0.69
VMP1-207ENST00000588131 ANKRD34CP0C6C1 535 aa10.74□□□□□ -0.69
VMP1-207ENST00000588131 FOLR1P15328 257 aa10.74□□□□□ -0.69
VMP1-207ENST00000588131 NELFEP18615 380 aaKnown RBP10.74□□□□□ -0.69
VMP1-207ENST00000588131 HIST1H1TP22492 207 aaPredicted RBP10.74□□□□□ -0.69
VMP1-207ENST00000588131 CALB2P22676 271 aa10.74□□□□□ -0.69
VMP1-207ENST00000588131 ATP5A1P25705 553 aaKnown RBP10.74□□□□□ -0.69
VMP1-207ENST00000588131 CERS1P27544 350 aa10.74□□□□□ -0.69
VMP1-207ENST00000588131 ARL4DP49703 201 aa10.74□□□□□ -0.69
VMP1-207ENST00000588131 POLR2JP52435 117 aaKnown RBP10.74□□□□□ -0.69
VMP1-207ENST00000588131 DGKQP52824 942 aa10.74□□□□□ -0.69
VMP1-207ENST00000588131 ARFIP1P53367 373 aa10.74□□□□□ -0.69
VMP1-207ENST00000588131 TAS2R50P59544 299 aa10.74□□□□□ -0.69
VMP1-207ENST00000588131 NCALDP61601 193 aa10.74□□□□□ -0.69
VMP1-207ENST00000588131 BTN3A2P78410 334 aa10.74□□□□□ -0.69
VMP1-207ENST00000588131 MC1RQ01726 317 aa10.74□□□□□ -0.69
VMP1-207ENST00000588131 CYLC2Q14093 348 aaPredicted RBP10.74□□□□□ -0.69
VMP1-207ENST00000588131 RCAN2Q14206 197 aa10.74□□□□□ -0.69
VMP1-207ENST00000588131 MAPRE2Q15555 327 aa10.74□□□□□ -0.69
VMP1-207ENST00000588131 GPR19Q15760 415 aa10.74□□□□□ -0.69
VMP1-207ENST00000588131 UGT8Q16880 541 aa10.74□□□□□ -0.69
VMP1-207ENST00000588131 PRTGQ2VWP7 1150 aa10.74□□□□□ -0.69
VMP1-207ENST00000588131 REP15Q6BDI9 236 aa10.74□□□□□ -0.69
VMP1-207ENST00000588131 RINLQ6ZS11 566 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms