RNA–Protein interactions for RNA: ENST00000585370.1

LIG3-203, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 235 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-203ENST00000585370 VIPP01282 170 aa9.94□□□□□ -0.82
LIG3-203ENST00000585370 COX7A2P14406 83 aa9.94□□□□□ -0.82
LIG3-203ENST00000585370 TCN1P20061 433 aaPredicted RBP9.94□□□□□ -0.82
LIG3-203ENST00000585370 PPIBP23284 216 aaKnown RBP9.94□□□□□ -0.82
LIG3-203ENST00000585370 TACR1P25103 407 aa9.94□□□□□ -0.82
LIG3-203ENST00000585370 AK4P27144 223 aaPredicted RBP9.94□□□□□ -0.82
LIG3-203ENST00000585370 SLC7A1P30825 629 aa9.94□□□□□ -0.82
LIG3-203ENST00000585370 SLC19A1P41440 591 aa9.94□□□□□ -0.82
LIG3-203ENST00000585370 GSK3BP49841 420 aa9.94□□□□□ -0.82
LIG3-203ENST00000585370 RACK1P63244 317 aaKnown RBP9.94□□□□□ -0.82
LIG3-203ENST00000585370 CSNK1G2P78368 415 aa9.94□□□□□ -0.82
LIG3-203ENST00000585370 RAE1P78406 368 aaKnown RBP9.94□□□□□ -0.82
LIG3-203ENST00000585370 RELAQ04206 551 aa9.94□□□□□ -0.82
LIG3-203ENST00000585370 LIPEQ05469 1076 aa9.94□□□□□ -0.82
LIG3-203ENST00000585370 EIF2B5Q13144 721 aaKnown RBP9.94□□□□□ -0.82
LIG3-203ENST00000585370 FZD2Q14332 565 aa9.94□□□□□ -0.82
LIG3-203ENST00000585370 CAPRIN1Q14444 709 aaKnown RBP9.94□□□□□ -0.82
LIG3-203ENST00000585370 SF1Q15637 639 aaKnown RBP9.94□□□□□ -0.82
LIG3-203ENST00000585370 TRIP6Q15654 476 aaKnown RBP9.94□□□□□ -0.82
LIG3-203ENST00000585370 FXNQ16595 210 aa9.94□□□□□ -0.82
LIG3-203ENST00000585370 MTX3Q5HYI7 312 aa9.94□□□□□ -0.82
LIG3-203ENST00000585370 WDR45BQ5MNZ6 344 aa9.94□□□□□ -0.82
LIG3-203ENST00000585370 C6orf10Q5SRN2 563 aa9.94□□□□□ -0.82
LIG3-203ENST00000585370 TPRG1LQ5T0D9 272 aa9.94□□□□□ -0.82
LIG3-203ENST00000585370 KHDRBS2Q5VWX1 349 aaKnown RBP9.94□□□□□ -0.82
LIG3-203ENST00000585370 LCN8Q6JVE9 175 aa9.94□□□□□ -0.82
LIG3-203ENST00000585370 LRRC74BQ6ZQY2 392 aa9.94□□□□□ -0.82
LIG3-203ENST00000585370 COMMD6Q7Z4G1 85 aa9.94□□□□□ -0.82
LIG3-203ENST00000585370 SLC9B2Q86UD5 537 aa9.94□□□□□ -0.82
LIG3-203ENST00000585370 SPATA24Q86W54 205 aa9.94□□□□□ -0.82
LIG3-203ENST00000585370 PARGQ86W56 976 aa9.94□□□□□ -0.82
LIG3-203ENST00000585370 NRROSQ86YC3 692 aa9.94□□□□□ -0.82
LIG3-203ENST00000585370 TRIM48Q8IWZ4 208 aa9.94□□□□□ -0.82
LIG3-203ENST00000585370 C2orf73Q8N5S3 287 aaPredicted RBP9.94□□□□□ -0.82
LIG3-203ENST00000585370 RNF148Q8N7C7 305 aa9.94□□□□□ -0.82
LIG3-203ENST00000585370 CATSPER1Q8NEC5 780 aa9.94□□□□□ -0.82
LIG3-203ENST00000585370 TRPV3Q8NET8 790 aa9.94□□□□□ -0.82
LIG3-203ENST00000585370 RGMAQ96B86 450 aa9.94□□□□□ -0.82
LIG3-203ENST00000585370 THAP11Q96EK4 314 aa9.94□□□□□ -0.82
LIG3-203ENST00000585370 PRAP1Q96NZ9 151 aa9.94□□□□□ -0.82
LIG3-203ENST00000585370 ECSITQ9BQ95 431 aa9.94□□□□□ -0.82
LIG3-203ENST00000585370 MS4A8Q9BY19 250 aa9.94□□□□□ -0.82
LIG3-203ENST00000585370 BHLHE41Q9C0J9 482 aaPredicted RBP9.94□□□□□ -0.82
LIG3-203ENST00000585370 TWSG1Q9GZX9 223 aa9.94□□□□□ -0.82
LIG3-203ENST00000585370 ALG2Q9H553 416 aa9.94□□□□□ -0.82
LIG3-203ENST00000585370 REEP4Q9H6H4 257 aa9.94□□□□□ -0.82
LIG3-203ENST00000585370 MYNNQ9NPC7 610 aa9.94□□□□□ -0.82
LIG3-203ENST00000585370 AASDHPPTQ9NRN7 309 aa9.94□□□□□ -0.82
LIG3-203ENST00000585370 SCHIP1Q9P0W5 487 aaPredicted RBP9.94□□□□□ -0.82
LIG3-203ENST00000585370 ZNF624Q9P2J8 865 aaPredicted RBP9.94□□□□□ -0.82
LIG3-203ENST00000585370 SUSD2Q9UGT4 822 aa9.94□□□□□ -0.82
LIG3-203ENST00000585370 LRRC42Q9Y546 428 aa9.94□□□□□ -0.82
LIG3-203ENST00000585370 PCDHB3Q9Y5E6 796 aa9.94□□□□□ -0.82
LIG3-203ENST00000585370 SNX13Q9Y5W8 968 aa9.94□□□□□ -0.82
LIG3-203ENST00000585370 GMEB1Q9Y692 573 aa9.94□□□□□ -0.82
LIG3-203ENST00000585370 DOCK9Q9BZ29 2069 aa9.94□□□□□ -0.82
LIG3-203ENST00000585370 PCM1Q15154 2024 aa9.94□□□□□ -0.82
LIG3-203ENST00000585370 FASNP49327 2511 aaKnown RBP9.93□□□□□ -0.82
LIG3-203ENST00000585370 A0A1B0GTW7 788 aa9.93□□□□□ -0.82
LIG3-203ENST00000585370 ARHGAP10A1A4S6 786 aa9.93□□□□□ -0.82
LIG3-203ENST00000585370 GABRR3A8MPY1 467 aa9.93□□□□□ -0.82
LIG3-203ENST00000585370 EVPLLA8MZ36 301 aa9.93□□□□□ -0.82
LIG3-203ENST00000585370 ISM1B1AKI9 464 aa9.93□□□□□ -0.82
LIG3-203ENST00000585370 TAF4O00268 1085 aa9.93□□□□□ -0.82
LIG3-203ENST00000585370 RFXANKO14593 260 aa9.93□□□□□ -0.82
LIG3-203ENST00000585370 CAPN5O15484 640 aaPredicted RBP9.93□□□□□ -0.82
LIG3-203ENST00000585370 OR1F1O43749 312 aa9.93□□□□□ -0.82
LIG3-203ENST00000585370 GUCY1B2O75343 617 aa9.93□□□□□ -0.82
LIG3-203ENST00000585370 ETHE1O95571 254 aa9.93□□□□□ -0.82
LIG3-203ENST00000585370 CAPNS1P04632 268 aa9.93□□□□□ -0.82
LIG3-203ENST00000585370 CHRM5P08912 532 aaPredicted RBP9.93□□□□□ -0.82
LIG3-203ENST00000585370 ZCCHC18P0CG32 403 aa9.93□□□□□ -0.82
LIG3-203ENST00000585370 IL10P22301 178 aa9.93□□□□□ -0.82
LIG3-203ENST00000585370 CD38P28907 300 aa9.93□□□□□ -0.82
LIG3-203ENST00000585370 BNC1Q01954 994 aa9.93□□□□□ -0.82
LIG3-203ENST00000585370 TGM3Q08188 693 aa9.93□□□□□ -0.82
LIG3-203ENST00000585370 ELOCQ15369 112 aa9.93□□□□□ -0.82
LIG3-203ENST00000585370 WLSQ5T9L3 541 aa9.93□□□□□ -0.82
LIG3-203ENST00000585370 SLC30A9Q6PML9 568 aa9.93□□□□□ -0.82
LIG3-203ENST00000585370 TAF8Q7Z7C8 310 aa9.93□□□□□ -0.82
LIG3-203ENST00000585370 RNF175Q8N4F7 328 aa9.93□□□□□ -0.82
LIG3-203ENST00000585370 HIPK4Q8NE63 616 aa9.93□□□□□ -0.82
LIG3-203ENST00000585370 OR2L3Q8NG85 312 aa9.93□□□□□ -0.82
LIG3-203ENST00000585370 OR4E2Q8NGC2 313 aa9.93□□□□□ -0.82
LIG3-203ENST00000585370 CLHC1Q8NHS4 586 aa9.93□□□□□ -0.82
LIG3-203ENST00000585370 C1orf216Q8TAB5 229 aa9.93□□□□□ -0.82
LIG3-203ENST00000585370 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.93□□□□□ -0.82
LIG3-203ENST00000585370 C16orf78Q8WTQ4 265 aa9.93□□□□□ -0.82
LIG3-203ENST00000585370 PYDC1Q8WXC3 89 aa9.93□□□□□ -0.82
LIG3-203ENST00000585370 SNX19Q92543 992 aa9.93□□□□□ -0.82
LIG3-203ENST00000585370 ZNF764Q96H86 408 aaPredicted RBP9.93□□□□□ -0.82
LIG3-203ENST00000585370 EGLN2Q96KS0 407 aa9.93□□□□□ -0.82
LIG3-203ENST00000585370 PPM1MQ96MI6 270 aa9.93□□□□□ -0.82
LIG3-203ENST00000585370 CCDC115Q96NT0 180 aa9.93□□□□□ -0.82
LIG3-203ENST00000585370 PHF12Q96QT6 1004 aa9.93□□□□□ -0.82
LIG3-203ENST00000585370 ORAI3Q9BRQ5 295 aa9.93□□□□□ -0.82
LIG3-203ENST00000585370 SLC39A3Q9BRY0 314 aa9.93□□□□□ -0.82
LIG3-203ENST00000585370 THUMPD3Q9BV44 507 aaKnown RBP9.93□□□□□ -0.82
LIG3-203ENST00000585370 DUSP26Q9BV47 211 aa9.93□□□□□ -0.82
LIG3-203ENST00000585370 PAIP1Q9H074 479 aaKnown RBP9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms