RNA–Protein interactions for RNA: ENST00000584796.5

VAPA-208, Transcript of VAMP associated protein A, humanhuman

TSL 3

Gene VAPA, Length 654 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-208ENST00000584796 MC1RQ01726 317 aa2.39□□□□□ -2.03
VAPA-208ENST00000584796 SP4Q02446 784 aa2.39□□□□□ -2.03
VAPA-208ENST00000584796 CREB5Q02930 508 aa2.39□□□□□ -2.03
VAPA-208ENST00000584796 EPS8Q12929 822 aa2.39□□□□□ -2.03
VAPA-208ENST00000584796 IKQ13123 557 aaPredicted RBP2.39□□□□□ -2.03
VAPA-208ENST00000584796 HTR4Q13639 388 aa2.39□□□□□ -2.03
VAPA-208ENST00000584796 CLLU1OSQ5K130 101 aa2.39□□□□□ -2.03
VAPA-208ENST00000584796 CCDC158Q5M9N0 1113 aa2.39□□□□□ -2.03
VAPA-208ENST00000584796 GPR139Q6DWJ6 353 aa2.39□□□□□ -2.03
VAPA-208ENST00000584796 PAQR6Q6TCH4 344 aa2.39□□□□□ -2.03
VAPA-208ENST00000584796 KRTAP5-5Q701N2 237 aaPredicted RBP2.39□□□□□ -2.03
VAPA-208ENST00000584796 ZNF534Q76KX8 674 aa2.39□□□□□ -2.03
VAPA-208ENST00000584796 PXKQ7Z7A4 578 aa2.39□□□□□ -2.03
VAPA-208ENST00000584796 DIS3L2Q8IYB7 885 aaKnown RBP2.39□□□□□ -2.03
VAPA-208ENST00000584796 L3MBTL4Q8NA19 623 aa2.39□□□□□ -2.03
VAPA-208ENST00000584796 TMEM178AQ8NBL3 297 aa2.39□□□□□ -2.03
VAPA-208ENST00000584796 MSANTD4Q8NCY6 345 aa2.39□□□□□ -2.03
VAPA-208ENST00000584796 PPTC7Q8NI37 304 aa2.39□□□□□ -2.03
VAPA-208ENST00000584796 DNAJB3Q8WWF6 145 aa2.39□□□□□ -2.03
VAPA-208ENST00000584796 SEMA4DQ92854 862 aa2.39□□□□□ -2.03
VAPA-208ENST00000584796 FGF14Q92915 247 aa2.39□□□□□ -2.03
VAPA-208ENST00000584796 ZNF707Q96C28 371 aaPredicted RBP2.39□□□□□ -2.03
VAPA-208ENST00000584796 FAM120BQ96EK7 910 aaKnown RBP2.39□□□□□ -2.03
VAPA-208ENST00000584796 SPATA33Q96N06 139 aa2.39□□□□□ -2.03
VAPA-208ENST00000584796 MAP7D2Q96T17 732 aa2.39□□□□□ -2.03
VAPA-208ENST00000584796 HNRNPABQ99729 332 aaKnown RBP2.39□□□□□ -2.03
VAPA-208ENST00000584796 PIGQQ9BRB3 760 aa2.39□□□□□ -2.03
VAPA-208ENST00000584796 PLA2G2FQ9BZM2 168 aa2.39□□□□□ -2.03
VAPA-208ENST00000584796 EDEM3Q9BZQ6 932 aa2.39□□□□□ -2.03
VAPA-208ENST00000584796 BOLA2Q9H3K6 86 aa2.39□□□□□ -2.03
VAPA-208ENST00000584796 FZD8Q9H461 694 aa2.39□□□□□ -2.03
VAPA-208ENST00000584796 RANGRFQ9HD47 186 aaPredicted RBP2.39□□□□□ -2.03
VAPA-208ENST00000584796 PCDHB16Q9NRJ7 776 aa2.39□□□□□ -2.03
VAPA-208ENST00000584796 TAS2R10Q9NYW0 307 aa2.39□□□□□ -2.03
VAPA-208ENST00000584796 FLRT3Q9NZU0 649 aa2.39□□□□□ -2.03
VAPA-208ENST00000584796 RPS6KA6Q9UK32 745 aa2.39□□□□□ -2.03
VAPA-208ENST00000584796 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP2.39□□□□□ -2.03
VAPA-208ENST00000584796 NAALADL1Q9UQQ1 740 aa2.39□□□□□ -2.03
VAPA-208ENST00000584796 CACNA1DQ01668 2161 aa2.39□□□□□ -2.03
VAPA-208ENST00000584796 ANAPC1Q9H1A4 1944 aa2.38□□□□□ -2.03
VAPA-208ENST00000584796 CABIN1Q9Y6J0 2220 aa2.38□□□□□ -2.03
VAPA-208ENST00000584796 SPTBN1Q01082 2364 aaKnown RBP2.38□□□□□ -2.03
VAPA-208ENST00000584796 NF1P21359 2839 aa2.38□□□□□ -2.03
VAPA-208ENST00000584796 CELSR1Q9NYQ6 3014 aa2.38□□□□□ -2.03
VAPA-208ENST00000584796 IGLV9-49A0A0B4J1Y8 123 aa2.38□□□□□ -2.03
VAPA-208ENST00000584796 TRIM64A6NGJ6 449 aa2.38□□□□□ -2.03
VAPA-208ENST00000584796 TRIM64BA6NI03 449 aa2.38□□□□□ -2.03
VAPA-208ENST00000584796 TGFB1I1O43294 461 aa2.38□□□□□ -2.03
VAPA-208ENST00000584796 ATP9AO75110 1047 aa2.38□□□□□ -2.03
VAPA-208ENST00000584796 KHDRBS3O75525 346 aaKnown RBP2.38□□□□□ -2.03
VAPA-208ENST00000584796 ERAL1O75616 437 aaKnown RBP2.38□□□□□ -2.03
VAPA-208ENST00000584796 SEC14L2O76054 403 aa2.38□□□□□ -2.03
VAPA-208ENST00000584796 CCNDBP1O95273 360 aa2.38□□□□□ -2.03
VAPA-208ENST00000584796 DUS4LO95620 317 aaKnown RBP2.38□□□□□ -2.03
VAPA-208ENST00000584796 SCG2P13521 617 aa2.38□□□□□ -2.03
VAPA-208ENST00000584796 ATP6V1B1P15313 513 aa2.38□□□□□ -2.03
VAPA-208ENST00000584796 CKMT2P17540 419 aa2.38□□□□□ -2.03
VAPA-208ENST00000584796 CASTP20810 708 aaKnown RBP2.38□□□□□ -2.03
VAPA-208ENST00000584796 PSMA3P25788 255 aa2.38□□□□□ -2.03
VAPA-208ENST00000584796 NNMTP40261 264 aa2.38□□□□□ -2.03
VAPA-208ENST00000584796 PSMB10P40306 273 aa2.38□□□□□ -2.03
VAPA-208ENST00000584796 PIK3CAP42336 1068 aa2.38□□□□□ -2.03
VAPA-208ENST00000584796 SLC1A4P43007 532 aa2.38□□□□□ -2.03
VAPA-208ENST00000584796 RARSP54136 660 aaKnown RBP2.38□□□□□ -2.03
VAPA-208ENST00000584796 OLR1P78380 273 aa2.38□□□□□ -2.03
VAPA-208ENST00000584796 IFI35P80217 286 aaPredicted RBP2.38□□□□□ -2.03
VAPA-208ENST00000584796 MRPS6P82932 125 aaKnown RBP2.38□□□□□ -2.03
VAPA-208ENST00000584796 WASHC5Q12768 1159 aa2.38□□□□□ -2.03
VAPA-208ENST00000584796 CSTF3Q12996 717 aaKnown RBP2.38□□□□□ -2.03
VAPA-208ENST00000584796 STK4Q13043 487 aa2.38□□□□□ -2.03
VAPA-208ENST00000584796 GPR17Q13304 367 aa2.38□□□□□ -2.03
VAPA-208ENST00000584796 TBCEQ15813 527 aaPredicted RBP2.38□□□□□ -2.03
VAPA-208ENST00000584796 DPCR1Q3MIW9 517 aa2.38□□□□□ -2.03
VAPA-208ENST00000584796 SBK1Q52WX2 424 aa2.38□□□□□ -2.03
VAPA-208ENST00000584796 C2CD6Q53TS8 623 aa2.38□□□□□ -2.03
VAPA-208ENST00000584796 CELF3Q5SZQ8 465 aaKnown RBP2.38□□□□□ -2.03
VAPA-208ENST00000584796 SPOUT1Q5T280 376 aaKnown RBP2.38□□□□□ -2.03
VAPA-208ENST00000584796 LRIF1Q5T3J3 769 aa2.38□□□□□ -2.03
VAPA-208ENST00000584796 RPUSD3Q6P087 351 aaKnown RBP2.38□□□□□ -2.03
VAPA-208ENST00000584796 DCLRE1AQ6PJP8 1040 aa2.38□□□□□ -2.03
VAPA-208ENST00000584796 IL27RAQ6UWB1 636 aa2.38□□□□□ -2.03
VAPA-208ENST00000584796 Q6ZS52 159 aa2.38□□□□□ -2.03
VAPA-208ENST00000584796 DENND5BQ6ZUT9 1274 aa2.38□□□□□ -2.03
VAPA-208ENST00000584796 SZRD1Q7Z422 152 aa2.38□□□□□ -2.03
VAPA-208ENST00000584796 GALNTL5Q7Z4T8 443 aa2.38□□□□□ -2.03
VAPA-208ENST00000584796 TSPAN33Q86UF1 283 aa2.38□□□□□ -2.03
VAPA-208ENST00000584796 CCDC190Q86UF4 302 aa2.38□□□□□ -2.03
VAPA-208ENST00000584796 FAM228AQ86W67 206 aa2.38□□□□□ -2.03
VAPA-208ENST00000584796 THNSL1Q8IYQ7 743 aa2.38□□□□□ -2.03
VAPA-208ENST00000584796 RNF168Q8IYW5 571 aaPredicted RBP2.38□□□□□ -2.03
VAPA-208ENST00000584796 TAGAPQ8N103 731 aa2.38□□□□□ -2.03
VAPA-208ENST00000584796 CRYBG2Q8N1P7 616 aa2.38□□□□□ -2.03
VAPA-208ENST00000584796 ARL10Q8N8L6 244 aa2.38□□□□□ -2.03
VAPA-208ENST00000584796 ZNF383Q8NA42 475 aa2.38□□□□□ -2.03
VAPA-208ENST00000584796 OR2T11Q8NH01 316 aa2.38□□□□□ -2.03
VAPA-208ENST00000584796 ETNPPLQ8TBG4 499 aa2.38□□□□□ -2.03
VAPA-208ENST00000584796 TRPC4APQ8TEL6 797 aa2.38□□□□□ -2.03
VAPA-208ENST00000584796 MRPS27Q92552 414 aaKnown RBP2.38□□□□□ -2.03
VAPA-208ENST00000584796 FAM149B1Q96BN6 582 aa2.38□□□□□ -2.03
VAPA-208ENST00000584796 CALML4Q96GE6 196 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms