RNA–Protein interactions for RNA: ENST00000582114.5

CDK5RAP3-223, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 2

Gene CDK5RAP3, Length 647 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-223	ENST00000582114	SNX12	Q9UMY4	172 aa		10.9	□□□□□ -0.66
CDK5RAP3-223	ENST00000582114	SLC22A14	Q9Y267	594 aa		10.9	□□□□□ -0.66
CDK5RAP3-223	ENST00000582114	VWA7	Q9Y334	891 aa		10.9	□□□□□ -0.66
CDK5RAP3-223	ENST00000582114	DYRK1B	Q9Y463	629 aa		10.9	□□□□□ -0.66
CDK5RAP3-223	ENST00000582114	PCDHGB6	Q9Y5F9	930 aa		10.9	□□□□□ -0.66
CDK5RAP3-223	ENST00000582114	APC	P25054	2843 aa		10.9	□□□□□ -0.66
CDK5RAP3-223	ENST00000582114	PCNX1	Q96RV3	2341 aa		10.9	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	SAGE2P	A6NJ88	616 aa		10.89	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	PSMD12	O00232	456 aa	Predicted RBP	10.89	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	ASNA1	O43681	348 aa		10.89	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	MLYCD	O95822	493 aa		10.89	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	ZNF24	P17028	368 aa		10.89	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	ITGA8	P53708	1063 aa		10.89	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	SKP1	P63208	163 aa		10.89	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	BTN3A2	P78410	334 aa		10.89	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	C18orf21	Q32NC0	220 aa	Predicted RBP	10.89	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	KRTCAP3	Q53RY4	240 aa		10.89	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	XKRX	Q6PP77	449 aa		10.89	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	SBSN	Q6UWP8	590 aa		10.89	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	QSOX2	Q6ZRP7	698 aa		10.89	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	GDF7	Q7Z4P5	450 aa		10.89	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	KLHL7	Q8IXQ5	586 aa		10.89	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	HORMAD2	Q8N7B1	307 aa		10.89	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	AGAP11	Q8TF27	550 aa		10.89	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	ATL1	Q8WXF7	558 aa		10.89	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	CCT6B	Q92526	530 aa		10.89	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	CAPZA3	Q96KX2	299 aa		10.89	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	EGFL8	Q99944	293 aa		10.89	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	AIF1L	Q9BQI0	150 aa		10.89	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	TRIM51	Q9BSJ1	452 aa		10.89	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	NAT9	Q9BTE0	207 aa		10.89	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	SARG	Q9BW04	601 aa		10.89	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	AICDA	Q9GZX7	198 aa		10.89	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	TRMT1	Q9NXH9	659 aa	Known RBP	10.89	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	ZNF835	Q9Y2P0	537 aa		10.89	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	MEMO1	Q9Y316	297 aa		10.89	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	PSAT1	Q9Y617	370 aa		10.89	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	TRBV11-1	A0A0K0K1C0	115 aa		10.88	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	NCF1B	A6NI72	391 aa	Predicted RBP	10.88	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	NCF1C	A8MVU1	366 aa	Predicted RBP	10.88	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	NME2P1	O60361	137 aa		10.88	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	CDC40	O60508	579 aa	Known RBP eCLIP	10.88	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	PIAS1	O75925	651 aa		10.88	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	MYO1D	O94832	1006 aa		10.88	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	ENO2	P09104	434 aa	Predicted RBP	10.88	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	RNH1	P13489	461 aa	Known RBP	10.88	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	NCF1	P14598	390 aa	Predicted RBP	10.88	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	POU3F2	P20265	443 aa	Predicted RBP	10.88	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	NME2	P22392	152 aa		10.88	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	IVD	P26440	423 aa		10.88	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	PPP2R1B	P30154	601 aa		10.88	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	PTGER1	P34995	402 aa		10.88	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	AHR	P35869	848 aa		10.88	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	GDF5	P43026	501 aa		10.88	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	CYB561	P49447	251 aa		10.88	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	SMS	P52788	366 aa		10.88	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	MLF1	P58340	268 aa		10.88	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	PPP1R3A	Q16821	1122 aa		10.88	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	NXPE4	Q6UWF7	544 aa		10.88	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114		Q6ZPB1	254 aa	Predicted RBP	10.88	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	STRA8	Q7Z7C7	330 aa		10.88	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	GALNT7	Q86SF2	657 aa		10.88	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	ZNF227	Q86WZ6	799 aa		10.88	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	SUPV3L1	Q8IYB8	786 aa	Known RBP eCLIP	10.88	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	PDIK1L	Q8N165	341 aa		10.88	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	CA13	Q8N1Q1	262 aa		10.88	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	GHDC	Q8N2G8	530 aa		10.88	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	DEFB126	Q9BYW3	111 aa		10.88	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	TRIM8	Q9BZR9	551 aa		10.88	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	TRIM31	Q9BZY9	425 aa		10.88	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	SLC6A16	Q9GZN6	736 aa		10.88	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	PELI2	Q9HAT8	420 aa		10.88	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	PRDM9	Q9NQV7	894 aa		10.88	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	PNO1	Q9NRX1	252 aa	Known RBP	10.88	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	ZFAT	Q9P243	1243 aa		10.88	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	ITGB1BP2	Q9UKP3	347 aa		10.88	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	FBXW2	Q9UKT8	454 aa		10.88	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	PKDREJ	Q9NTG1	2253 aa		10.88	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	NCOA6	Q14686	2063 aa	Predicted RBP	10.88	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	IGKV3D-11	A0A0A0MRZ8	115 aa		10.87	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	MYOCOS	A0A1B0GUC4	107 aa		10.87	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	TCRBV16S1A1N1	A0A5B0	115 aa		10.87	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	URAD	A6NGE7	173 aa		10.87	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	FCHO1	O14526	889 aa		10.87	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	WDR47	O94967	919 aa		10.87	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	CLDN14	O95500	239 aa		10.87	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	SMIM10L1	P0DMW3	83 aa		10.87	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	ZNF37A	P17032	561 aa	Predicted RBP	10.87	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	PTGER4	P35408	488 aa		10.87	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	KIR3DL1	P43629	444 aa		10.87	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	MEOX1	P50221	254 aa		10.87	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	GPR85	P60893	370 aa		10.87	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	FASTKD3	Q14CZ7	662 aa	Known RBP	10.87	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	TSN	Q15631	228 aa	Known RBP	10.87	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	FBXO48	Q5FWF7	155 aa		10.87	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	STEAP4	Q687X5	459 aa		10.87	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	C16orf47	Q6ZP98	133 aa	Predicted RBP	10.87	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	CAPN12	Q6ZSI9	719 aa		10.87	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	FRA10AC1	Q70Z53	315 aa		10.87	□□□□□ -0.67
CDK5RAP3-223	ENST00000582114	FGD2	Q7Z6J4	655 aa		10.87	□□□□□ -0.67

Retrieved 100 of 20,778 RNA–protein pairs in 23 ms