RNA–Protein interactions for RNA: ENST00000578917.1

TRAF4-213, Transcript of TNF receptor associated factor 4, humanhuman

TSL 4

Gene TRAF4, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-213ENST00000578917 WISP3O95389 354 aaPredicted RBP6.19□□□□□ -1.42
TRAF4-213ENST00000578917 B3GALT4O96024 378 aa6.19□□□□□ -1.42
TRAF4-213ENST00000578917 FHP07954 510 aa6.19□□□□□ -1.42
TRAF4-213ENST00000578917 ABHD2P08910 425 aa6.19□□□□□ -1.42
TRAF4-213ENST00000578917 MYBL2P10244 700 aa6.19□□□□□ -1.42
TRAF4-213ENST00000578917 KRT15P19012 456 aa6.19□□□□□ -1.42
TRAF4-213ENST00000578917 TAC1P20366 129 aa6.19□□□□□ -1.42
TRAF4-213ENST00000578917 GSTM2P28161 218 aa6.19□□□□□ -1.42
TRAF4-213ENST00000578917 RAP1GDS1P52306 607 aa6.19□□□□□ -1.42
TRAF4-213ENST00000578917 MLLT10P55197 1068 aa6.19□□□□□ -1.42
TRAF4-213ENST00000578917 OR4D2P58180 307 aa6.19□□□□□ -1.42
TRAF4-213ENST00000578917 PHEXP78562 749 aa6.19□□□□□ -1.42
TRAF4-213ENST00000578917 SLC13A2Q13183 592 aa6.19□□□□□ -1.42
TRAF4-213ENST00000578917 GTF2H2Q13888 395 aa6.19□□□□□ -1.42
TRAF4-213ENST00000578917 SETDB1Q15047 1291 aa6.19□□□□□ -1.42
TRAF4-213ENST00000578917 AP5B1Q2VPB7 878 aa6.19□□□□□ -1.42
TRAF4-213ENST00000578917 BTBD16Q32M84 506 aa6.19□□□□□ -1.42
TRAF4-213ENST00000578917 NADK2Q4G0N4 442 aa6.19□□□□□ -1.42
TRAF4-213ENST00000578917 JMJD6Q6NYC1 403 aaPredicted RBP6.19□□□□□ -1.42
TRAF4-213ENST00000578917 GTF2H2CQ6P1K8 395 aa6.19□□□□□ -1.42
TRAF4-213ENST00000578917 ISLR2Q6UXK2 745 aa6.19□□□□□ -1.42
TRAF4-213ENST00000578917 CPEB2Q7Z5Q1 589 aaKnown RBP6.19□□□□□ -1.42
TRAF4-213ENST00000578917 ATCAYQ86WG3 371 aa6.19□□□□□ -1.42
TRAF4-213ENST00000578917 PDSS2Q86YH6 399 aa6.19□□□□□ -1.42
TRAF4-213ENST00000578917 ZC3H7AQ8IWR0 971 aaKnown RBP6.19□□□□□ -1.42
TRAF4-213ENST00000578917 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP6.19□□□□□ -1.42
TRAF4-213ENST00000578917 KLHDC8AQ8IYD2 350 aa6.19□□□□□ -1.42
TRAF4-213ENST00000578917 CNPY4Q8N129 248 aa6.19□□□□□ -1.42
TRAF4-213ENST00000578917 ARHGEF39Q8N4T4 335 aa6.19□□□□□ -1.42
TRAF4-213ENST00000578917 PTGR2Q8N8N7 351 aaPredicted RBP6.19□□□□□ -1.42
TRAF4-213ENST00000578917 LRRN4CLQ8ND94 238 aa6.19□□□□□ -1.42
TRAF4-213ENST00000578917 SRFBP1Q8NEF9 429 aaKnown RBP6.19□□□□□ -1.42
TRAF4-213ENST00000578917 UTP15Q8TED0 518 aaKnown RBP6.19□□□□□ -1.42
TRAF4-213ENST00000578917 DCAKDQ8WVC6 231 aa6.19□□□□□ -1.42
TRAF4-213ENST00000578917 GAL3ST3Q96A11 431 aa6.19□□□□□ -1.42
TRAF4-213ENST00000578917 REPS1Q96D71 796 aa6.19□□□□□ -1.42
TRAF4-213ENST00000578917 MTFMTQ96DP5 389 aaKnown RBP6.19□□□□□ -1.42
TRAF4-213ENST00000578917 SEC16BQ96JE7 1060 aa6.19□□□□□ -1.42
TRAF4-213ENST00000578917 CNDP1Q96KN2 507 aa6.19□□□□□ -1.42
TRAF4-213ENST00000578917 OR1F2PQ96R84 312 aa6.19□□□□□ -1.42
TRAF4-213ENST00000578917 F2RL3Q96RI0 385 aa6.19□□□□□ -1.42
TRAF4-213ENST00000578917 ATOH8Q96SQ7 321 aa6.19□□□□□ -1.42
TRAF4-213ENST00000578917 MRPL57Q9BQC6 102 aaKnown RBP6.19□□□□□ -1.42
TRAF4-213ENST00000578917 TMEM79Q9BSE2 394 aa6.19□□□□□ -1.42
TRAF4-213ENST00000578917 FUT8Q9BYC5 575 aa6.19□□□□□ -1.42
TRAF4-213ENST00000578917 SLC6A16Q9GZN6 736 aa6.19□□□□□ -1.42
TRAF4-213ENST00000578917 ROGDIQ9GZN7 287 aa6.19□□□□□ -1.42
TRAF4-213ENST00000578917 VN1R1Q9GZP7 353 aa6.19□□□□□ -1.42
TRAF4-213ENST00000578917 KLHL31Q9H511 634 aa6.19□□□□□ -1.42
TRAF4-213ENST00000578917 EPS8L2Q9H6S3 715 aa6.19□□□□□ -1.42
TRAF4-213ENST00000578917 NT5DC2Q9H857 520 aa6.19□□□□□ -1.42
TRAF4-213ENST00000578917 L2HGDHQ9H9P8 463 aa6.19□□□□□ -1.42
TRAF4-213ENST00000578917 CLK4Q9HAZ1 481 aaKnown RBP6.19□□□□□ -1.42
TRAF4-213ENST00000578917 RIC8BQ9NVN3 520 aa6.19□□□□□ -1.42
TRAF4-213ENST00000578917 ZNF358Q9NW07 568 aa6.19□□□□□ -1.42
TRAF4-213ENST00000578917 STMN3Q9NZ72 180 aa6.19□□□□□ -1.42
TRAF4-213ENST00000578917 LUZP4Q9P127 313 aa6.19□□□□□ -1.42
TRAF4-213ENST00000578917 C5AR2Q9P296 337 aa6.19□□□□□ -1.42
TRAF4-213ENST00000578917 PTGFRNQ9P2B2 879 aa6.19□□□□□ -1.42
TRAF4-213ENST00000578917 ZNF490Q9ULM2 529 aaPredicted RBP6.19□□□□□ -1.42
TRAF4-213ENST00000578917 MRPS33Q9Y291 106 aaKnown RBP6.19□□□□□ -1.42
TRAF4-213ENST00000578917 SPACA6W5XKT8 324 aa6.19□□□□□ -1.42
TRAF4-213ENST00000578917 SMG1Q96Q15 3661 aaKnown RBP6.19□□□□□ -1.42
TRAF4-213ENST00000578917 COL6A6A6NMZ7 2263 aa6.19□□□□□ -1.42
TRAF4-213ENST00000578917 LRRK2Q5S007 2527 aa6.19□□□□□ -1.42
TRAF4-213ENST00000578917 IGHV1-45A0A0A0MS14 117 aa6.18□□□□□ -1.42
TRAF4-213ENST00000578917 TLDC2A0PJX2 215 aa6.18□□□□□ -1.42
TRAF4-213ENST00000578917 DYTNA2CJ06 578 aa6.18□□□□□ -1.42
TRAF4-213ENST00000578917 MAGEB17A8MXT2 336 aa6.18□□□□□ -1.42
TRAF4-213ENST00000578917 FAM227AF5H4B4 570 aa6.18□□□□□ -1.42
TRAF4-213ENST00000578917 GOLGA8RI6L899 631 aa6.18□□□□□ -1.42
TRAF4-213ENST00000578917 SAP18O00422 153 aaKnown RBP6.18□□□□□ -1.42
TRAF4-213ENST00000578917 DNAJB6O75190 326 aa6.18□□□□□ -1.42
TRAF4-213ENST00000578917 VPS4BO75351 444 aa6.18□□□□□ -1.42
TRAF4-213ENST00000578917 SIX3O95343 332 aaPredicted RBP6.18□□□□□ -1.42
TRAF4-213ENST00000578917 SLU7O95391 586 aaKnown RBP6.18□□□□□ -1.42
TRAF4-213ENST00000578917 CLDN9O95484 217 aa6.18□□□□□ -1.42
TRAF4-213ENST00000578917 TGFB1P01137 390 aa6.18□□□□□ -1.42
TRAF4-213ENST00000578917 PDGFAP04085 211 aa6.18□□□□□ -1.42
TRAF4-213ENST00000578917 SERPINA7P05543 415 aa6.18□□□□□ -1.42
TRAF4-213ENST00000578917 PRR35P0CG20 571 aa6.18□□□□□ -1.42
TRAF4-213ENST00000578917 TNNI3P19429 210 aa6.18□□□□□ -1.42
TRAF4-213ENST00000578917 MAOAP21397 527 aa6.18□□□□□ -1.42
TRAF4-213ENST00000578917 PTX3P26022 381 aaPredicted RBP6.18□□□□□ -1.42
TRAF4-213ENST00000578917 EEF1DP29692 281 aaKnown RBP6.18□□□□□ -1.42
TRAF4-213ENST00000578917 SERPINB1P30740 379 aa6.18□□□□□ -1.42
TRAF4-213ENST00000578917 CASP2P42575 452 aa6.18□□□□□ -1.42
TRAF4-213ENST00000578917 SLCO1A2P46721 670 aa6.18□□□□□ -1.42
TRAF4-213ENST00000578917 CCT5P48643 541 aa6.18□□□□□ -1.42
TRAF4-213ENST00000578917 CCNG1P51959 295 aa6.18□□□□□ -1.42
TRAF4-213ENST00000578917 MTTPP55157 894 aa6.18□□□□□ -1.42
TRAF4-213ENST00000578917 SOX8P57073 446 aa6.18□□□□□ -1.42
TRAF4-213ENST00000578917 TAS2R50P59544 299 aa6.18□□□□□ -1.42
TRAF4-213ENST00000578917 ARG2P78540 354 aa6.18□□□□□ -1.42
TRAF4-213ENST00000578917 IFFO1Q0D2I5 559 aa6.18□□□□□ -1.42
TRAF4-213ENST00000578917 IFT88Q13099 833 aa6.18□□□□□ -1.42
TRAF4-213ENST00000578917 TBCCQ15814 346 aa6.18□□□□□ -1.42
TRAF4-213ENST00000578917 IGFBP7Q16270 282 aa6.18□□□□□ -1.42
TRAF4-213ENST00000578917 CPSF6Q16630 551 aaKnown RBP eCLIP6.18□□□□□ -1.42
TRAF4-213ENST00000578917 TMEM35AQ53FP2 167 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms