RNA–Protein interactions for RNA: ENST00000578044.5

SMARCE1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,184 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-213ENST00000578044 SLCO4C1Q6ZQN7 724 aa13.61□□□□□ -0.23
SMARCE1-213ENST00000578044 CRLF3Q8IUI8 442 aa13.61□□□□□ -0.23
SMARCE1-213ENST00000578044 SPNS2Q8IVW8 549 aa13.61□□□□□ -0.23
SMARCE1-213ENST00000578044 GAL3ST3Q96A11 431 aa13.61□□□□□ -0.23
SMARCE1-213ENST00000578044 MOCOSQ96EN8 888 aa13.61□□□□□ -0.23
SMARCE1-213ENST00000578044 MAGEB10Q96LZ2 347 aaPredicted RBP13.61□□□□□ -0.23
SMARCE1-213ENST00000578044 CPNE1Q99829 537 aa13.61□□□□□ -0.23
SMARCE1-213ENST00000578044 MACROD1Q9BQ69 325 aa13.61□□□□□ -0.23
SMARCE1-213ENST00000578044 ERP44Q9BS26 406 aa13.61□□□□□ -0.23
SMARCE1-213ENST00000578044 GPAMQ9HCL2 828 aa13.61□□□□□ -0.23
SMARCE1-213ENST00000578044 SLC17A6Q9P2U8 582 aa13.61□□□□□ -0.23
SMARCE1-213ENST00000578044 CTNNAL1Q9UBT7 734 aa13.61□□□□□ -0.23
SMARCE1-213ENST00000578044 SEC14L3Q9UDX4 400 aa13.61□□□□□ -0.23
SMARCE1-213ENST00000578044 ZNF835Q9Y2P0 537 aa13.61□□□□□ -0.23
SMARCE1-213ENST00000578044 SAGE2PA6NJ88 616 aa13.6□□□□□ -0.23
SMARCE1-213ENST00000578044 USP27XA6NNY8 438 aa13.6□□□□□ -0.23
SMARCE1-213ENST00000578044 CDC7O00311 574 aa13.6□□□□□ -0.23
SMARCE1-213ENST00000578044 ZNF888P0CJ79 500 aaPredicted RBP13.6□□□□□ -0.23
SMARCE1-213ENST00000578044 CD96P40200 585 aa13.6□□□□□ -0.23
SMARCE1-213ENST00000578044 CA7P43166 264 aa13.6□□□□□ -0.23
SMARCE1-213ENST00000578044 RPL21P46778 160 aaKnown RBP13.6□□□□□ -0.23
SMARCE1-213ENST00000578044 HSD17B7P56937 341 aa13.6□□□□□ -0.23
SMARCE1-213ENST00000578044 OR4D2P58180 307 aa13.6□□□□□ -0.23
SMARCE1-213ENST00000578044 CAV1Q03135 178 aa13.6□□□□□ -0.23
SMARCE1-213ENST00000578044 CALCOCO2Q13137 446 aa13.6□□□□□ -0.23
SMARCE1-213ENST00000578044 RCN2Q14257 317 aa13.6□□□□□ -0.23
SMARCE1-213ENST00000578044 TGFBIQ15582 683 aa13.6□□□□□ -0.23
SMARCE1-213ENST00000578044 ZKSCAN8Q15776 578 aaPredicted RBP13.6□□□□□ -0.23
SMARCE1-213ENST00000578044 TBCCQ15814 346 aa13.6□□□□□ -0.23
SMARCE1-213ENST00000578044 GFRALQ6UXV0 394 aa13.6□□□□□ -0.23
SMARCE1-213ENST00000578044 TMIGD1Q6UXZ0 262 aa13.6□□□□□ -0.23
SMARCE1-213ENST00000578044 BNC2Q6ZN30 1099 aaPredicted RBP13.6□□□□□ -0.23
SMARCE1-213ENST00000578044 Q6ZPB1 254 aaPredicted RBP13.6□□□□□ -0.23
SMARCE1-213ENST00000578044 TMPRSS11BQ86T26 416 aa13.6□□□□□ -0.23
SMARCE1-213ENST00000578044 BEST3Q8N1M1 668 aa13.6□□□□□ -0.23
SMARCE1-213ENST00000578044 KRT78Q8N1N4 520 aa13.6□□□□□ -0.23
SMARCE1-213ENST00000578044 POGLUT1Q8NBL1 392 aa13.6□□□□□ -0.23
SMARCE1-213ENST00000578044 FAM98AQ8NCA5 519 aaKnown RBP13.6□□□□□ -0.23
SMARCE1-213ENST00000578044 OR5T3Q8NGG3 340 aa13.6□□□□□ -0.23
SMARCE1-213ENST00000578044 PYROXD1Q8WU10 500 aa13.6□□□□□ -0.23
SMARCE1-213ENST00000578044 ALKBH8Q96BT7 664 aaKnown RBP13.6□□□□□ -0.23
SMARCE1-213ENST00000578044 CAPZA3Q96KX2 299 aa13.6□□□□□ -0.23
SMARCE1-213ENST00000578044 UBXN10Q96LJ8 280 aa13.6□□□□□ -0.23
SMARCE1-213ENST00000578044 PWWP2AQ96N64 755 aa13.6□□□□□ -0.23
SMARCE1-213ENST00000578044 GPR22Q99680 433 aa13.6□□□□□ -0.23
SMARCE1-213ENST00000578044 NPAS2Q99743 824 aa13.6□□□□□ -0.23
SMARCE1-213ENST00000578044 TRIM51Q9BSJ1 452 aa13.6□□□□□ -0.23
SMARCE1-213ENST00000578044 RHBGQ9H310 441 aa13.6□□□□□ -0.23
SMARCE1-213ENST00000578044 SUCOQ9UBS9 1254 aaKnown RBP13.6□□□□□ -0.23
SMARCE1-213ENST00000578044 IKZF3Q9UKT9 509 aa13.6□□□□□ -0.23
SMARCE1-213ENST00000578044 IGHV3-20A0A0C4DH32 117 aa13.59□□□□□ -0.23
SMARCE1-213ENST00000578044 A1L4Q6 167 aa13.59□□□□□ -0.23
SMARCE1-213ENST00000578044 LRIT2A6NDA9 550 aa13.59□□□□□ -0.23
SMARCE1-213ENST00000578044 A8MUI8 341 aa13.59□□□□□ -0.23
SMARCE1-213ENST00000578044 PSMD12O00232 456 aaPredicted RBP13.59□□□□□ -0.23
SMARCE1-213ENST00000578044 HNRNPRO43390 633 aaKnown RBP13.59□□□□□ -0.23
SMARCE1-213ENST00000578044 NEURL1O76050 574 aa13.59□□□□□ -0.23
SMARCE1-213ENST00000578044 EEF1DP29692 281 aaKnown RBP13.59□□□□□ -0.23
SMARCE1-213ENST00000578044 GP5P40197 560 aa13.59□□□□□ -0.23
SMARCE1-213ENST00000578044 CASP2P42575 452 aa13.59□□□□□ -0.23
SMARCE1-213ENST00000578044 SLC12A2P55011 1212 aa13.59□□□□□ -0.23
SMARCE1-213ENST00000578044 NAB1Q13506 487 aa13.59□□□□□ -0.23
SMARCE1-213ENST00000578044 FASTKD3Q14CZ7 662 aaKnown RBP13.59□□□□□ -0.23
SMARCE1-213ENST00000578044 SULT1C3Q6IMI6 304 aa13.59□□□□□ -0.23
SMARCE1-213ENST00000578044 XKRXQ6PP77 449 aa13.59□□□□□ -0.23
SMARCE1-213ENST00000578044 FRA10AC1Q70Z53 315 aa13.59□□□□□ -0.23
SMARCE1-213ENST00000578044 RPS19BP1Q86WX3 136 aaKnown RBP13.59□□□□□ -0.23
SMARCE1-213ENST00000578044 ANKMY2Q8IV38 441 aa13.59□□□□□ -0.23
SMARCE1-213ENST00000578044 CEP97Q8IW35 865 aa13.59□□□□□ -0.23
SMARCE1-213ENST00000578044 SCUBE1Q8IWY4 988 aa13.59□□□□□ -0.23
SMARCE1-213ENST00000578044 ZBED8Q8IZ13 594 aa13.59□□□□□ -0.23
SMARCE1-213ENST00000578044 ZNF808Q8N4W9 903 aaPredicted RBP13.59□□□□□ -0.23
SMARCE1-213ENST00000578044 PDPRQ8NCN5 879 aa13.59□□□□□ -0.23
SMARCE1-213ENST00000578044 NFAM1Q8NET5 270 aaPredicted RBP13.59□□□□□ -0.23
SMARCE1-213ENST00000578044 ANKRD49Q8WVL7 239 aa13.59□□□□□ -0.23
SMARCE1-213ENST00000578044 PTCHD1Q96NR3 888 aa13.59□□□□□ -0.23
SMARCE1-213ENST00000578044 SPNS1Q9H2V7 528 aa13.59□□□□□ -0.23
SMARCE1-213ENST00000578044 RUBCNLQ9H714 662 aa13.59□□□□□ -0.23
SMARCE1-213ENST00000578044 TXNDC16Q9P2K2 825 aa13.59□□□□□ -0.23
SMARCE1-213ENST00000578044 DNAJC13O75165 2243 aa13.59□□□□□ -0.23
SMARCE1-213ENST00000578044 FAM159BA6NKW6 160 aa13.58□□□□□ -0.24
SMARCE1-213ENST00000578044 GABRR3A8MPY1 467 aa13.58□□□□□ -0.24
SMARCE1-213ENST00000578044 UNC5CO95185 931 aa13.58□□□□□ -0.24
SMARCE1-213ENST00000578044 C1QAP02745 245 aa13.58□□□□□ -0.24
SMARCE1-213ENST00000578044 STATHP02808 62 aa13.58□□□□□ -0.24
SMARCE1-213ENST00000578044 SP1P08047 785 aa13.58□□□□□ -0.24
SMARCE1-213ENST00000578044 STMN1P16949 149 aa13.58□□□□□ -0.24
SMARCE1-213ENST00000578044 TFEBP19484 476 aa13.58□□□□□ -0.24
SMARCE1-213ENST00000578044 MST1P26927 711 aa13.58□□□□□ -0.24
SMARCE1-213ENST00000578044 SERPINB1P30740 379 aa13.58□□□□□ -0.24
SMARCE1-213ENST00000578044 HLCSP50747 726 aa13.58□□□□□ -0.24
SMARCE1-213ENST00000578044 ARFIP1P53367 373 aa13.58□□□□□ -0.24
SMARCE1-213ENST00000578044 CASP6P55212 293 aa13.58□□□□□ -0.24
SMARCE1-213ENST00000578044 MLF1P58340 268 aa13.58□□□□□ -0.24
SMARCE1-213ENST00000578044 LAPTM5Q13571 262 aa13.58□□□□□ -0.24
SMARCE1-213ENST00000578044 OR1C1Q15619 314 aa13.58□□□□□ -0.24
SMARCE1-213ENST00000578044 TSNQ15631 228 aaKnown RBP13.58□□□□□ -0.24
SMARCE1-213ENST00000578044 HP1BP3Q5SSJ5 553 aaPredicted RBP13.58□□□□□ -0.24
SMARCE1-213ENST00000578044 ZNF595Q8IYB9 648 aa13.58□□□□□ -0.24
SMARCE1-213ENST00000578044 SRFBP1Q8NEF9 429 aaKnown RBP13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms