RNA–Protein interactions for RNA: ENST00000577483.1

SSH2-205, Transcript of slingshot protein phosphatase 2, humanhuman

TSL 1 (best)

Gene SSH2, Length 1,630 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-205ENST00000577483 HMX2A2RU54 273 aa11.92□□□□□ -0.5
SSH2-205ENST00000577483 MAGEB17A8MXT2 336 aa11.92□□□□□ -0.5
SSH2-205ENST00000577483 ICAM2P13598 275 aa11.92□□□□□ -0.5
SSH2-205ENST00000577483 BTG2P78543 158 aa11.92□□□□□ -0.5
SSH2-205ENST00000577483 BMPR2Q13873 1038 aa11.92□□□□□ -0.5
SSH2-205ENST00000577483 FCRLBQ6BAA4 426 aa11.92□□□□□ -0.5
SSH2-205ENST00000577483 PAPD4Q6PIY7 484 aaKnown RBP11.92□□□□□ -0.5
SSH2-205ENST00000577483 TMIGD1Q6UXZ0 262 aa11.92□□□□□ -0.5
SSH2-205ENST00000577483 ISCA2Q86U28 154 aa11.92□□□□□ -0.5
SSH2-205ENST00000577483 CA13Q8N1Q1 262 aa11.92□□□□□ -0.5
SSH2-205ENST00000577483 NOA1Q8NC60 698 aaKnown RBP11.92□□□□□ -0.5
SSH2-205ENST00000577483 OR1N1Q8NGS0 311 aa11.92□□□□□ -0.5
SSH2-205ENST00000577483 ATOH8Q96SQ7 321 aa11.92□□□□□ -0.5
SSH2-205ENST00000577483 NPAS2Q99743 824 aa11.92□□□□□ -0.5
SSH2-205ENST00000577483 ALG9Q9H6U8 611 aa11.92□□□□□ -0.5
SSH2-205ENST00000577483 IGSF5Q9NSI5 407 aa11.92□□□□□ -0.5
SSH2-205ENST00000577483 DNAJC11Q9NVH1 559 aa11.92□□□□□ -0.5
SSH2-205ENST00000577483 GPRC5BQ9NZH0 403 aa11.92□□□□□ -0.5
SSH2-205ENST00000577483 CD274Q9NZQ7 290 aa11.92□□□□□ -0.5
SSH2-205ENST00000577483 PTBP2Q9UKA9 531 aaKnown RBP11.92□□□□□ -0.5
SSH2-205ENST00000577483 RNF112Q9ULX5 631 aa11.92□□□□□ -0.5
SSH2-205ENST00000577483 SPTBN1Q01082 2364 aaKnown RBP11.91□□□□□ -0.5
SSH2-205ENST00000577483 ANKUB1A6NFN9 424 aa11.91□□□□□ -0.5
SSH2-205ENST00000577483 FAM227AF5H4B4 570 aa11.91□□□□□ -0.5
SSH2-205ENST00000577483 MAN1A2O60476 641 aa11.91□□□□□ -0.5
SSH2-205ENST00000577483 B4GALT2O60909 372 aa11.91□□□□□ -0.5
SSH2-205ENST00000577483 STK16O75716 305 aa11.91□□□□□ -0.5
SSH2-205ENST00000577483 UQCRHP07919 91 aa11.91□□□□□ -0.5
SSH2-205ENST00000577483 TFEBP19484 476 aa11.91□□□□□ -0.5
SSH2-205ENST00000577483 ST13P50502 369 aaKnown RBP11.91□□□□□ -0.5
SSH2-205ENST00000577483 SKP1P63208 163 aa11.91□□□□□ -0.5
SSH2-205ENST00000577483 IRF9Q00978 393 aa11.91□□□□□ -0.5
SSH2-205ENST00000577483 ZNF33BQ06732 778 aa11.91□□□□□ -0.5
SSH2-205ENST00000577483 NAB1Q13506 487 aa11.91□□□□□ -0.5
SSH2-205ENST00000577483 CDKL4Q5MAI5 379 aa11.91□□□□□ -0.5
SSH2-205ENST00000577483 SULT1C3Q6IMI6 304 aa11.91□□□□□ -0.5
SSH2-205ENST00000577483 NIPAL1Q6NVV3 410 aa11.91□□□□□ -0.5
SSH2-205ENST00000577483 H3F3CQ6NXT2 135 aa11.91□□□□□ -0.5
SSH2-205ENST00000577483 RPUSD3Q6P087 351 aaKnown RBP11.91□□□□□ -0.5
SSH2-205ENST00000577483 RAPH1Q70E73 1250 aa11.91□□□□□ -0.5
SSH2-205ENST00000577483 CENPLQ8N0S6 344 aaPredicted RBP11.91□□□□□ -0.5
SSH2-205ENST00000577483 MS4A6EQ96DS6 147 aa11.91□□□□□ -0.5
SSH2-205ENST00000577483 MRRFQ96E11 262 aaKnown RBP11.91□□□□□ -0.5
SSH2-205ENST00000577483 MAGEB10Q96LZ2 347 aaPredicted RBP11.91□□□□□ -0.5
SSH2-205ENST00000577483 TAAR6Q96RI8 345 aa11.91□□□□□ -0.5
SSH2-205ENST00000577483 RNF32Q9H0A6 362 aa11.91□□□□□ -0.5
SSH2-205ENST00000577483 CNOT10Q9H9A5 744 aaKnown RBP11.91□□□□□ -0.5
SSH2-205ENST00000577483 AGPAT4Q9NRZ5 378 aa11.91□□□□□ -0.5
SSH2-205ENST00000577483 DMGDHQ9UI17 866 aaKnown RBP11.91□□□□□ -0.5
SSH2-205ENST00000577483 ERRFI1Q9UJM3 462 aaPredicted RBP11.91□□□□□ -0.5
SSH2-205ENST00000577483 ZNF490Q9ULM2 529 aaPredicted RBP11.91□□□□□ -0.5
SSH2-205ENST00000577483 LRIT2A6NDA9 550 aa11.9□□□□□ -0.5
SSH2-205ENST00000577483 URADA6NGE7 173 aa11.9□□□□□ -0.5
SSH2-205ENST00000577483 A8MUI8 341 aa11.9□□□□□ -0.5
SSH2-205ENST00000577483 UBXN8O00124 270 aa11.9□□□□□ -0.5
SSH2-205ENST00000577483 MAOAP21397 527 aa11.9□□□□□ -0.5
SSH2-205ENST00000577483 JAK1P23458 1154 aa11.9□□□□□ -0.5
SSH2-205ENST00000577483 SLC26A5P58743 744 aa11.9□□□□□ -0.5
SSH2-205ENST00000577483 AP2B1P63010 937 aa11.9□□□□□ -0.5
SSH2-205ENST00000577483 DOC2AQ14183 400 aa11.9□□□□□ -0.5
SSH2-205ENST00000577483 PDK4Q16654 411 aa11.9□□□□□ -0.5
SSH2-205ENST00000577483 WHAMMP3Q1A5X7 153 aa11.9□□□□□ -0.5
SSH2-205ENST00000577483 ABHD17BQ5VST6 288 aa11.9□□□□□ -0.5
SSH2-205ENST00000577483 QSOX2Q6ZRP7 698 aa11.9□□□□□ -0.5
SSH2-205ENST00000577483 CRLF3Q8IUI8 442 aa11.9□□□□□ -0.5
SSH2-205ENST00000577483 BEST3Q8N1M1 668 aa11.9□□□□□ -0.5
SSH2-205ENST00000577483 SNX31Q8N9S9 440 aa11.9□□□□□ -0.5
SSH2-205ENST00000577483 ST6GALNAC3Q8NDV1 305 aa11.9□□□□□ -0.5
SSH2-205ENST00000577483 SSC4DQ8WTU2 575 aa11.9□□□□□ -0.5
SSH2-205ENST00000577483 FAR1Q8WVX9 515 aa11.9□□□□□ -0.5
SSH2-205ENST00000577483 CCT6BQ92526 530 aa11.9□□□□□ -0.5
SSH2-205ENST00000577483 ZNF592Q92610 1267 aa11.9□□□□□ -0.5
SSH2-205ENST00000577483 GAL3ST3Q96A11 431 aa11.9□□□□□ -0.5
SSH2-205ENST00000577483 NXNL1Q96CM4 212 aa11.9□□□□□ -0.5
SSH2-205ENST00000577483 WDR34Q96EX3 536 aa11.9□□□□□ -0.5
SSH2-205ENST00000577483 LPAR4Q99677 370 aa11.9□□□□□ -0.5
SSH2-205ENST00000577483 SLX1AQ9BQ83 275 aa11.9□□□□□ -0.5
SSH2-205ENST00000577483 EHD1Q9H4M9 534 aa11.9□□□□□ -0.5
SSH2-205ENST00000577483 NT5DC2Q9H857 520 aa11.9□□□□□ -0.5
SSH2-205ENST00000577483 MMP25Q9NPA2 562 aa11.9□□□□□ -0.5
SSH2-205ENST00000577483 NECTIN3Q9NQS3 549 aa11.9□□□□□ -0.5
SSH2-205ENST00000577483 NINJ2Q9NZG7 142 aa11.9□□□□□ -0.5
SSH2-205ENST00000577483 DIDO1Q9BTC0 2240 aaKnown RBP11.9□□□□□ -0.5
SSH2-205ENST00000577483 IGKV3D-11A0A0A0MRZ8 115 aa11.89□□□□□ -0.51
SSH2-205ENST00000577483 TRAV17A0A0B4J275 112 aa11.89□□□□□ -0.51
SSH2-205ENST00000577483 OR5H15A6NDH6 313 aa11.89□□□□□ -0.51
SSH2-205ENST00000577483 CLGNO14967 610 aa11.89□□□□□ -0.51
SSH2-205ENST00000577483 ERI3O43414 337 aaKnown RBP11.89□□□□□ -0.51
SSH2-205ENST00000577483 CCNT2O60583 730 aaKnown RBP11.89□□□□□ -0.51
SSH2-205ENST00000577483 H2AFYO75367 372 aaKnown RBP11.89□□□□□ -0.51
SSH2-205ENST00000577483 LTA4HP09960 611 aaKnown RBP11.89□□□□□ -0.51
SSH2-205ENST00000577483 MTHFD2P13995 350 aa11.89□□□□□ -0.51
SSH2-205ENST00000577483 ECHS1P30084 290 aa11.89□□□□□ -0.51
SSH2-205ENST00000577483 OR4D2P58180 307 aa11.89□□□□□ -0.51
SSH2-205ENST00000577483 STXBP1P61764 594 aaKnown RBP11.89□□□□□ -0.51
SSH2-205ENST00000577483 BTN3A2P78410 334 aa11.89□□□□□ -0.51
SSH2-205ENST00000577483 SRSF11Q05519 484 aaKnown RBP11.89□□□□□ -0.51
SSH2-205ENST00000577483 RUNX2Q13950 521 aa11.89□□□□□ -0.51
SSH2-205ENST00000577483 E2F2Q14209 437 aa11.89□□□□□ -0.51
SSH2-205ENST00000577483 EXT1Q16394 746 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms