RNA–Protein interactions for RNA: ENST00000576940.1

NPLOC4-220, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 216 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-220ENST00000576940 WDR53Q7Z5U6 358 aaPredicted RBP9.42□□□□□ -0.9
NPLOC4-220ENST00000576940 BIVMQ86UB2 503 aa9.42□□□□□ -0.9
NPLOC4-220ENST00000576940 ARMC10Q8N2F6 343 aa9.42□□□□□ -0.9
NPLOC4-220ENST00000576940 UBL4BQ8N7F7 174 aa9.42□□□□□ -0.9
NPLOC4-220ENST00000576940 MFSD9Q8NBP5 474 aa9.42□□□□□ -0.9
NPLOC4-220ENST00000576940 APCDD1LQ8NCL9 501 aa9.42□□□□□ -0.9
NPLOC4-220ENST00000576940 ACRBPQ8NEB7 543 aa9.42□□□□□ -0.9
NPLOC4-220ENST00000576940 GOT1L1Q8NHS2 421 aaPredicted RBP9.42□□□□□ -0.9
NPLOC4-220ENST00000576940 SREK1Q8WXA9 508 aaKnown RBP9.42□□□□□ -0.9
NPLOC4-220ENST00000576940 CALR3Q96L12 384 aaKnown RBP9.42□□□□□ -0.9
NPLOC4-220ENST00000576940 ALPK1Q96QP1 1244 aa9.42□□□□□ -0.9
NPLOC4-220ENST00000576940 TCF12Q99081 682 aa9.42□□□□□ -0.9
NPLOC4-220ENST00000576940 KIFC1Q9BW19 673 aa9.42□□□□□ -0.9
NPLOC4-220ENST00000576940 IL22Q9GZX6 179 aa9.42□□□□□ -0.9
NPLOC4-220ENST00000576940 RHBGQ9H310 441 aa9.42□□□□□ -0.9
NPLOC4-220ENST00000576940 CCDC177Q9NQR7 707 aaPredicted RBP9.42□□□□□ -0.9
NPLOC4-220ENST00000576940 SYBUQ9NX95 663 aa9.42□□□□□ -0.9
NPLOC4-220ENST00000576940 BFARQ9NZS9 450 aa9.42□□□□□ -0.9
NPLOC4-220ENST00000576940 ZNF223Q9UK11 482 aaPredicted RBP9.42□□□□□ -0.9
NPLOC4-220ENST00000576940 REXO2Q9Y3B8 237 aaKnown RBP9.42□□□□□ -0.9
NPLOC4-220ENST00000576940 HRNRQ86YZ3 2850 aaPredicted RBP9.41□□□□□ -0.9
NPLOC4-220ENST00000576940 A0A0G2JMM0 328 aa9.41□□□□□ -0.9
NPLOC4-220ENST00000576940 A0A1W2PPB8 328 aa9.41□□□□□ -0.9
NPLOC4-220ENST00000576940 A0A1W2PRS3 328 aa9.41□□□□□ -0.9
NPLOC4-220ENST00000576940 TCRBV16S1A1N1A0A5B0 115 aa9.41□□□□□ -0.9
NPLOC4-220ENST00000576940 KIR3DP1A8MWS1 328 aa9.41□□□□□ -0.9
NPLOC4-220ENST00000576940 KIAA1324LA8MWY0 1029 aaPredicted RBP9.41□□□□□ -0.9
NPLOC4-220ENST00000576940 PFDN6O15212 129 aa9.41□□□□□ -0.9
NPLOC4-220ENST00000576940 NDUFS4O43181 175 aa9.41□□□□□ -0.9
NPLOC4-220ENST00000576940 OR1F1O43749 312 aa9.41□□□□□ -0.9
NPLOC4-220ENST00000576940 FTCDO95954 541 aa9.41□□□□□ -0.9
NPLOC4-220ENST00000576940 SLC35G6P0C7Q6 338 aa9.41□□□□□ -0.9
NPLOC4-220ENST00000576940 MPC1LP0DKB6 136 aa9.41□□□□□ -0.9
NPLOC4-220ENST00000576940 CDH1P12830 882 aa9.41□□□□□ -0.9
NPLOC4-220ENST00000576940 NPPBP16860 134 aa9.41□□□□□ -0.9
NPLOC4-220ENST00000576940 ALOX12P18054 663 aa9.41□□□□□ -0.9
NPLOC4-220ENST00000576940 JAK1P23458 1154 aa9.41□□□□□ -0.9
NPLOC4-220ENST00000576940 UQCRC1P31930 480 aa9.41□□□□□ -0.9
NPLOC4-220ENST00000576940 GRK3P35626 688 aa9.41□□□□□ -0.9
NPLOC4-220ENST00000576940 HNF4AP41235 474 aa9.41□□□□□ -0.9
NPLOC4-220ENST00000576940 CLCN2P51788 898 aa9.41□□□□□ -0.9
NPLOC4-220ENST00000576940 NAE1Q13564 534 aa9.41□□□□□ -0.9
NPLOC4-220ENST00000576940 ZNF750Q32MQ0 723 aa9.41□□□□□ -0.9
NPLOC4-220ENST00000576940 RNF187Q5TA31 235 aaPredicted RBP9.41□□□□□ -0.9
NPLOC4-220ENST00000576940 ZNF549Q6P9A3 640 aa9.41□□□□□ -0.9
NPLOC4-220ENST00000576940 IL20RBQ6UXL0 311 aa9.41□□□□□ -0.9
NPLOC4-220ENST00000576940 MBOAT1Q6ZNC8 495 aa9.41□□□□□ -0.9
NPLOC4-220ENST00000576940 QSOX2Q6ZRP7 698 aa9.41□□□□□ -0.9
NPLOC4-220ENST00000576940 KIAA0408Q6ZU52 694 aa9.41□□□□□ -0.9
NPLOC4-220ENST00000576940 TAOK1Q7L7X3 1001 aa9.41□□□□□ -0.9
NPLOC4-220ENST00000576940 PIWIL4Q7Z3Z4 852 aaKnown RBP9.41□□□□□ -0.9
NPLOC4-220ENST00000576940 C17orf64Q86WR6 236 aa9.41□□□□□ -0.9
NPLOC4-220ENST00000576940 PRIMA1Q86XR5 153 aa9.41□□□□□ -0.9
NPLOC4-220ENST00000576940 CPNE9Q8IYJ1 553 aa9.41□□□□□ -0.9
NPLOC4-220ENST00000576940 PSD4Q8NDX1 1056 aa9.41□□□□□ -0.9
NPLOC4-220ENST00000576940 MYRIPQ8NFW9 859 aa9.41□□□□□ -0.9
NPLOC4-220ENST00000576940 OR2M7Q8NG81 312 aa9.41□□□□□ -0.9
NPLOC4-220ENST00000576940 SLCO2A1Q92959 643 aa9.41□□□□□ -0.9
NPLOC4-220ENST00000576940 C18orf12Q96KH6 178 aa9.41□□□□□ -0.9
NPLOC4-220ENST00000576940 PANX2Q96RD6 677 aa9.41□□□□□ -0.9
NPLOC4-220ENST00000576940 SMC6Q96SB8 1091 aa9.41□□□□□ -0.9
NPLOC4-220ENST00000576940 CNPPD1Q9BV87 410 aa9.41□□□□□ -0.9
NPLOC4-220ENST00000576940 ZDHHC11Q9H8X9 412 aa9.41□□□□□ -0.9
NPLOC4-220ENST00000576940 TIMMDC1Q9NPL8 285 aa9.41□□□□□ -0.9
NPLOC4-220ENST00000576940 ZFATQ9P243 1243 aa9.41□□□□□ -0.9
NPLOC4-220ENST00000576940 PAK5Q9P286 719 aa9.41□□□□□ -0.9
NPLOC4-220ENST00000576940 ADAMTS6Q9UKP5 1117 aa9.41□□□□□ -0.9
NPLOC4-220ENST00000576940 ERVK-11Q9UQG0 969 aa9.41□□□□□ -0.9
NPLOC4-220ENST00000576940 DRG1Q9Y295 367 aaKnown RBP9.41□□□□□ -0.9
NPLOC4-220ENST00000576940 MPDZO75970 2070 aa9.41□□□□□ -0.9
NPLOC4-220ENST00000576940 EML6Q6ZMW3 1958 aa9.41□□□□□ -0.9
NPLOC4-220ENST00000576940 IGKV3D-11A0A0A0MRZ8 115 aa9.4□□□□□ -0.9
NPLOC4-220ENST00000576940 TCRBV7S3A2A0A539 114 aa9.4□□□□□ -0.9
NPLOC4-220ENST00000576940 CTAGE15A4D2H0 777 aa9.4□□□□□ -0.9
NPLOC4-220ENST00000576940 A6NNC1 897 aa9.4□□□□□ -0.9
NPLOC4-220ENST00000576940 BTNL10A8MVZ5 291 aa9.4□□□□□ -0.9
NPLOC4-220ENST00000576940 CEP104O60308 925 aa9.4□□□□□ -0.9
NPLOC4-220ENST00000576940 MYO1DO94832 1006 aa9.4□□□□□ -0.9
NPLOC4-220ENST00000576940 TUBB4AP04350 444 aa9.4□□□□□ -0.9
NPLOC4-220ENST00000576940 CELA3AP09093 270 aa9.4□□□□□ -0.9
NPLOC4-220ENST00000576940 INHBBP09529 407 aa9.4□□□□□ -0.9
NPLOC4-220ENST00000576940 ZNF888P0CJ79 500 aaPredicted RBP9.4□□□□□ -0.9
NPLOC4-220ENST00000576940 OGNP20774 298 aaKnown RBP9.4□□□□□ -0.9
NPLOC4-220ENST00000576940 ADSLP30566 484 aaPredicted RBP9.4□□□□□ -0.9
NPLOC4-220ENST00000576940 SSR4P51571 173 aa9.4□□□□□ -0.9
NPLOC4-220ENST00000576940 GPR143P51810 404 aa9.4□□□□□ -0.9
NPLOC4-220ENST00000576940 TERF1P54274 439 aa9.4□□□□□ -0.9
NPLOC4-220ENST00000576940 RAB8AP61006 207 aa9.4□□□□□ -0.9
NPLOC4-220ENST00000576940 CTBP1Q13363 440 aa9.4□□□□□ -0.9
NPLOC4-220ENST00000576940 DEFB113Q30KQ7 82 aa9.4□□□□□ -0.9
NPLOC4-220ENST00000576940 TTLL9Q3SXZ7 439 aa9.4□□□□□ -0.9
NPLOC4-220ENST00000576940 NEPROQ6NW34 567 aa9.4□□□□□ -0.9
NPLOC4-220ENST00000576940 AGTRAPQ6RW13 159 aa9.4□□□□□ -0.9
NPLOC4-220ENST00000576940 CLEC9AQ6UXN8 241 aa9.4□□□□□ -0.9
NPLOC4-220ENST00000576940 CHSY3Q70JA7 882 aa9.4□□□□□ -0.9
NPLOC4-220ENST00000576940 TRILQ7L0X0 811 aa9.4□□□□□ -0.9
NPLOC4-220ENST00000576940 CTAGE6Q86UF2 777 aa9.4□□□□□ -0.9
NPLOC4-220ENST00000576940 CILP2Q8IUL8 1156 aa9.4□□□□□ -0.9
NPLOC4-220ENST00000576940 DENND6AQ8IWF6 608 aa9.4□□□□□ -0.9
NPLOC4-220ENST00000576940 CCDC89Q8N998 374 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms