RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 DCTP40126 519 aa5.91□□□□□ -1.46
NUP88-212ENST00000576708 NPY2RP49146 381 aa5.91□□□□□ -1.46
NUP88-212ENST00000576708 EFNA3P52797 238 aa5.91□□□□□ -1.46
NUP88-212ENST00000576708 ARF3P61204 181 aaPredicted RBP5.91□□□□□ -1.46
NUP88-212ENST00000576708 EEF1A2Q05639 463 aaKnown RBP5.91□□□□□ -1.46
NUP88-212ENST00000576708 CDC16Q13042 620 aa5.91□□□□□ -1.46
NUP88-212ENST00000576708 CUL1Q13616 776 aa5.91□□□□□ -1.46
NUP88-212ENST00000576708 GBX1Q14549 363 aa5.91□□□□□ -1.46
NUP88-212ENST00000576708 KCNJ11Q14654 390 aa5.91□□□□□ -1.46
NUP88-212ENST00000576708 ZNF124Q15973 351 aa5.91□□□□□ -1.46
NUP88-212ENST00000576708 SYT16Q17RD7 645 aa5.91□□□□□ -1.46
NUP88-212ENST00000576708 HKDC1Q2TB90 917 aa5.91□□□□□ -1.46
NUP88-212ENST00000576708 PRTGQ2VWP7 1150 aa5.91□□□□□ -1.46
NUP88-212ENST00000576708 KLHL38Q2WGJ6 581 aa5.91□□□□□ -1.46
NUP88-212ENST00000576708 TUBB8Q3ZCM7 444 aa5.91□□□□□ -1.46
NUP88-212ENST00000576708 TMEM177Q53S58 311 aa5.91□□□□□ -1.46
NUP88-212ENST00000576708 TCTE1Q5JU00 501 aa5.91□□□□□ -1.46
NUP88-212ENST00000576708 AGAP7PQ5VUJ5 663 aa5.91□□□□□ -1.46
NUP88-212ENST00000576708 ANKRD22Q5VYY1 191 aa5.91□□□□□ -1.46
NUP88-212ENST00000576708 IGFL2Q6UWQ7 119 aa5.91□□□□□ -1.46
NUP88-212ENST00000576708 CENPUQ71F23 418 aa5.91□□□□□ -1.46
NUP88-212ENST00000576708 RNF44Q7L0R7 432 aa5.91□□□□□ -1.46
NUP88-212ENST00000576708 KCNMB4Q86W47 210 aa5.91□□□□□ -1.46
NUP88-212ENST00000576708 PLD3Q8IV08 490 aa5.91□□□□□ -1.46
NUP88-212ENST00000576708 IGDCC3Q8IVU1 814 aa5.91□□□□□ -1.46
NUP88-212ENST00000576708 TXLNBQ8N3L3 684 aa5.91□□□□□ -1.46
NUP88-212ENST00000576708 OR9A1PQ8NGU1 263 aa5.91□□□□□ -1.46
NUP88-212ENST00000576708 UHMK1Q8TAS1 419 aaKnown RBP5.91□□□□□ -1.46
NUP88-212ENST00000576708 GRHL3Q8TE85 626 aa5.91□□□□□ -1.46
NUP88-212ENST00000576708 TM9SF4Q92544 642 aa5.91□□□□□ -1.46
NUP88-212ENST00000576708 MIEF2Q96C03 454 aa5.91□□□□□ -1.46
NUP88-212ENST00000576708 AGAP4Q96P64 663 aa5.91□□□□□ -1.46
NUP88-212ENST00000576708 PANX3Q96QZ0 392 aa5.91□□□□□ -1.46
NUP88-212ENST00000576708 PKP4Q99569 1192 aa5.91□□□□□ -1.46
NUP88-212ENST00000576708 BARD1Q99728 777 aaKnown RBP5.91□□□□□ -1.46
NUP88-212ENST00000576708 WDR77Q9BQA1 342 aaPredicted RBP5.91□□□□□ -1.46
NUP88-212ENST00000576708 YIPF4Q9BSR8 244 aa5.91□□□□□ -1.46
NUP88-212ENST00000576708 KIFC1Q9BW19 673 aa5.91□□□□□ -1.46
NUP88-212ENST00000576708 IL22Q9GZX6 179 aa5.91□□□□□ -1.46
NUP88-212ENST00000576708 LHPPQ9H008 270 aa5.91□□□□□ -1.46
NUP88-212ENST00000576708 SLC26A1Q9H2B4 701 aa5.91□□□□□ -1.46
NUP88-212ENST00000576708 WDR54Q9H977 334 aa5.91□□□□□ -1.46
NUP88-212ENST00000576708 SMURF1Q9HCE7 757 aa5.91□□□□□ -1.46
NUP88-212ENST00000576708 EIF2B3Q9NR50 452 aaKnown RBP5.91□□□□□ -1.46
NUP88-212ENST00000576708 BFARQ9NZS9 450 aa5.91□□□□□ -1.46
NUP88-212ENST00000576708 C3orf18Q9UK00 162 aa5.91□□□□□ -1.46
NUP88-212ENST00000576708 OSGIN2Q9Y236 505 aa5.91□□□□□ -1.46
NUP88-212ENST00000576708 DRG1Q9Y295 367 aaKnown RBP5.91□□□□□ -1.46
NUP88-212ENST00000576708 MRPS2Q9Y399 296 aaKnown RBP5.91□□□□□ -1.46
NUP88-212ENST00000576708 ICE1Q9Y2F5 2266 aa5.91□□□□□ -1.46
NUP88-212ENST00000576708 A0A0A6YYC8 382 aaPredicted RBP5.9□□□□□ -1.46
NUP88-212ENST00000576708 OR2A25A4D2G3 310 aa5.9□□□□□ -1.46
NUP88-212ENST00000576708 GOLGA8MH3BSY2 632 aa5.9□□□□□ -1.46
NUP88-212ENST00000576708 I3L1I5 382 aaPredicted RBP5.9□□□□□ -1.46
NUP88-212ENST00000576708 ZNF561-AS1K7EIQ3 104 aa5.9□□□□□ -1.46
NUP88-212ENST00000576708 MAP2K7O14733 419 aa5.9□□□□□ -1.46
NUP88-212ENST00000576708 KPNA5O15131 536 aa5.9□□□□□ -1.46
NUP88-212ENST00000576708 P2RX6O15547 441 aa5.9□□□□□ -1.46
NUP88-212ENST00000576708 LRRTM2O43300 516 aa5.9□□□□□ -1.46
NUP88-212ENST00000576708 CEP104O60308 925 aa5.9□□□□□ -1.46
NUP88-212ENST00000576708 SRPX2O60687 465 aaPredicted RBP5.9□□□□□ -1.46
NUP88-212ENST00000576708 JRKO75564 520 aa5.9□□□□□ -1.46
NUP88-212ENST00000576708 MATN4O95460 622 aa5.9□□□□□ -1.46
NUP88-212ENST00000576708 SYF2O95926 243 aaKnown RBP5.9□□□□□ -1.46
NUP88-212ENST00000576708 PKMP14618 531 aaKnown RBP5.9□□□□□ -1.46
NUP88-212ENST00000576708 FBLP22087 321 aaKnown RBP5.9□□□□□ -1.46
NUP88-212ENST00000576708 CMPK1P30085 196 aa5.9□□□□□ -1.46
NUP88-212ENST00000576708 RPA3P35244 121 aaPredicted RBP5.9□□□□□ -1.46
NUP88-212ENST00000576708 TSFMP43897 325 aaKnown RBP5.9□□□□□ -1.46
NUP88-212ENST00000576708 LIMS1P48059 325 aa5.9□□□□□ -1.46
NUP88-212ENST00000576708 PNLIPRP1P54315 467 aa5.9□□□□□ -1.46
NUP88-212ENST00000576708 EMP2P54851 167 aa5.9□□□□□ -1.46
NUP88-212ENST00000576708 MAT1AQ00266 395 aaKnown RBP5.9□□□□□ -1.46
NUP88-212ENST00000576708 OCA2Q04671 838 aa5.9□□□□□ -1.46
NUP88-212ENST00000576708 CTBP1Q13363 440 aa5.9□□□□□ -1.46
NUP88-212ENST00000576708 ZNF169Q14929 603 aaPredicted RBP5.9□□□□□ -1.46
NUP88-212ENST00000576708 TYSND1Q2T9J0 566 aa5.9□□□□□ -1.46
NUP88-212ENST00000576708 FAM214AQ32MH5 1076 aa5.9□□□□□ -1.46
NUP88-212ENST00000576708 ANKRD20A4Q4UJ75 823 aa5.9□□□□□ -1.46
NUP88-212ENST00000576708 TM4SF20Q53R12 229 aa5.9□□□□□ -1.46
NUP88-212ENST00000576708 B3GNTL1Q67FW5 361 aaPredicted RBP5.9□□□□□ -1.46
NUP88-212ENST00000576708 MRNIPQ6NTE8 343 aa5.9□□□□□ -1.46
NUP88-212ENST00000576708 TTC27Q6P3X3 843 aa5.9□□□□□ -1.46
NUP88-212ENST00000576708 ZNF549Q6P9A3 640 aa5.9□□□□□ -1.46
NUP88-212ENST00000576708 LRRC8BQ6P9F7 803 aa5.9□□□□□ -1.46
NUP88-212ENST00000576708 DRICH1Q6PGQ1 229 aaPredicted RBP5.9□□□□□ -1.46
NUP88-212ENST00000576708 ISLR2Q6UXK2 745 aa5.9□□□□□ -1.46
NUP88-212ENST00000576708 CD300LDQ6UXZ3 194 aa5.9□□□□□ -1.46
NUP88-212ENST00000576708 PCGF5Q86SE9 256 aa5.9□□□□□ -1.46
NUP88-212ENST00000576708 SDCCAG8Q86SQ7 713 aaPredicted RBP5.9□□□□□ -1.46
NUP88-212ENST00000576708 CAND1Q86VP6 1230 aaKnown RBP5.9□□□□□ -1.46
NUP88-212ENST00000576708 PAQR7Q86WK9 346 aa5.9□□□□□ -1.46
NUP88-212ENST00000576708 LRRC6Q86X45 466 aa5.9□□□□□ -1.46
NUP88-212ENST00000576708 DENND6AQ8IWF6 608 aa5.9□□□□□ -1.46
NUP88-212ENST00000576708 SIRT6Q8N6T7 355 aa5.9□□□□□ -1.46
NUP88-212ENST00000576708 CSNK1A1LQ8N752 337 aa5.9□□□□□ -1.46
NUP88-212ENST00000576708 POU5F2Q8N7G0 328 aa5.9□□□□□ -1.46
NUP88-212ENST00000576708 PRELID2Q8N945 189 aa5.9□□□□□ -1.46
NUP88-212ENST00000576708 OR1N1Q8NGS0 311 aa5.9□□□□□ -1.46
NUP88-212ENST00000576708 HMGCLL1Q8TB92 370 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms