RNA–Protein interactions for RNA: ENST00000573827.1

SMG6-214, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-214ENST00000573827 ESAMQ96AP7 390 aa16.38■□□□□ 0.21
SMG6-214ENST00000573827 TSPAN17Q96FV3 270 aa16.38■□□□□ 0.21
SMG6-214ENST00000573827 RAB17Q9H0T7 212 aa16.38■□□□□ 0.21
SMG6-214ENST00000573827 NT5DC2Q9H857 520 aa16.38■□□□□ 0.21
SMG6-214ENST00000573827 MMP25Q9NPA2 562 aa16.38■□□□□ 0.21
SMG6-214ENST00000573827 AGPAT4Q9NRZ5 378 aa16.38■□□□□ 0.21
SMG6-214ENST00000573827 C19orf25Q9UFG5 118 aaPredicted RBP16.38■□□□□ 0.21
SMG6-214ENST00000573827 PTBP2Q9UKA9 531 aaKnown RBP16.38■□□□□ 0.21
SMG6-214ENST00000573827 PCNX1Q96RV3 2341 aa16.37■□□□□ 0.21
SMG6-214ENST00000573827 EDN3P14138 238 aa16.37■□□□□ 0.21
SMG6-214ENST00000573827 STMN1P16949 149 aa16.37■□□□□ 0.21
SMG6-214ENST00000573827 HNRNPH1P31943 449 aaKnown RBP16.37■□□□□ 0.21
SMG6-214ENST00000573827 HNF4AP41235 474 aa16.37■□□□□ 0.21
SMG6-214ENST00000573827 AP2B1P63010 937 aa16.37■□□□□ 0.21
SMG6-214ENST00000573827 SLBPQ14493 270 aaKnown RBP eCLIP16.37■□□□□ 0.21
SMG6-214ENST00000573827 NSDHLQ15738 373 aa16.37■□□□□ 0.21
SMG6-214ENST00000573827 BTBD16Q32M84 506 aa16.37■□□□□ 0.21
SMG6-214ENST00000573827 ADPRMQ3LIE5 342 aa16.37■□□□□ 0.21
SMG6-214ENST00000573827 GRTP1Q5TC63 336 aa16.37■□□□□ 0.21
SMG6-214ENST00000573827 MFSD4BQ5TF39 518 aa16.37■□□□□ 0.21
SMG6-214ENST00000573827 NIPAL1Q6NVV3 410 aa16.37■□□□□ 0.21
SMG6-214ENST00000573827 PAPD4Q6PIY7 484 aaKnown RBP16.37■□□□□ 0.21
SMG6-214ENST00000573827 QSOX2Q6ZRP7 698 aa16.37■□□□□ 0.21
SMG6-214ENST00000573827 FRA10AC1Q70Z53 315 aa16.37■□□□□ 0.21
SMG6-214ENST00000573827 ABHD13Q7L211 337 aa16.37■□□□□ 0.21
SMG6-214ENST00000573827 CMC1Q7Z7K0 106 aa16.37■□□□□ 0.21
SMG6-214ENST00000573827 ISCA2Q86U28 154 aa16.37■□□□□ 0.21
SMG6-214ENST00000573827 GPSM1Q86YR5 675 aa16.37■□□□□ 0.21
SMG6-214ENST00000573827 CA13Q8N1Q1 262 aa16.37■□□□□ 0.21
SMG6-214ENST00000573827 TBC1D19Q8N5T2 526 aa16.37■□□□□ 0.21
SMG6-214ENST00000573827 FBF1Q8TES7 1133 aa16.37■□□□□ 0.21
SMG6-214ENST00000573827 QRFPRQ96P65 431 aa16.37■□□□□ 0.21
SMG6-214ENST00000573827 EHD1Q9H4M9 534 aa16.37■□□□□ 0.21
SMG6-214ENST00000573827 IGSF5Q9NSI5 407 aa16.37■□□□□ 0.21
SMG6-214ENST00000573827 GPRC5BQ9NZH0 403 aa16.37■□□□□ 0.21
SMG6-214ENST00000573827 ZNF490Q9ULM2 529 aaPredicted RBP16.37■□□□□ 0.21
SMG6-214ENST00000573827 DYTNA2CJ06 578 aa16.36■□□□□ 0.21
SMG6-214ENST00000573827 LRIT2A6NDA9 550 aa16.36■□□□□ 0.21
SMG6-214ENST00000573827 OR5H15A6NDH6 313 aa16.36■□□□□ 0.21
SMG6-214ENST00000573827 FAM227AF5H4B4 570 aa16.36■□□□□ 0.21
SMG6-214ENST00000573827 SPRP35270 261 aaPredicted RBP16.36■□□□□ 0.21
SMG6-214ENST00000573827 SLC12A2P55011 1212 aa16.36■□□□□ 0.21
SMG6-214ENST00000573827 SLC26A5P58743 744 aa16.36■□□□□ 0.21
SMG6-214ENST00000573827 BTG2P78543 158 aa16.36■□□□□ 0.21
SMG6-214ENST00000573827 SLC7A5Q01650 507 aa16.36■□□□□ 0.21
SMG6-214ENST00000573827 RBBP5Q15291 538 aaKnown RBP16.36■□□□□ 0.21
SMG6-214ENST00000573827 INAQ16352 499 aa16.36■□□□□ 0.21
SMG6-214ENST00000573827 TOR1AIP1Q5JTV8 583 aa16.36■□□□□ 0.21
SMG6-214ENST00000573827 ACER2Q5QJU3 275 aa16.36■□□□□ 0.21
SMG6-214ENST00000573827 FCRLBQ6BAA4 426 aa16.36■□□□□ 0.21
SMG6-214ENST00000573827 HIST2H2BCQ6DN03 193 aa16.36■□□□□ 0.21
SMG6-214ENST00000573827 SULT1C3Q6IMI6 304 aa16.36■□□□□ 0.21
SMG6-214ENST00000573827 TMIGD1Q6UXZ0 262 aa16.36■□□□□ 0.21
SMG6-214ENST00000573827 CCDC25Q86WR0 208 aa16.36■□□□□ 0.21
SMG6-214ENST00000573827 CRLF3Q8IUI8 442 aa16.36■□□□□ 0.21
SMG6-214ENST00000573827 CTAGE3PQ8IX95 158 aa16.36■□□□□ 0.21
SMG6-214ENST00000573827 TCAIMQ8N3R3 496 aa16.36■□□□□ 0.21
SMG6-214ENST00000573827 PPM1NQ8N819 430 aa16.36■□□□□ 0.21
SMG6-214ENST00000573827 NFAM1Q8NET5 270 aaPredicted RBP16.36■□□□□ 0.21
SMG6-214ENST00000573827 ELP5Q8TE02 316 aa16.36■□□□□ 0.21
SMG6-214ENST00000573827 MS4A6EQ96DS6 147 aa16.36■□□□□ 0.21
SMG6-214ENST00000573827 SEC16BQ96JE7 1060 aa16.36■□□□□ 0.21
SMG6-214ENST00000573827 ATOH8Q96SQ7 321 aa16.36■□□□□ 0.21
SMG6-214ENST00000573827 LRRC1Q9BTT6 524 aa16.36■□□□□ 0.21
SMG6-214ENST00000573827 DNAJC11Q9NVH1 559 aa16.36■□□□□ 0.21
SMG6-214ENST00000573827 STMN3Q9NZ72 180 aa16.36■□□□□ 0.21
SMG6-214ENST00000573827 MYO9AB2RTY4 2548 aa16.36■□□□□ 0.21
SMG6-214ENST00000573827 CSMD1Q96PZ7 3565 aa16.35■□□□□ 0.21
SMG6-214ENST00000573827 TCRBV16S1A1N1A0A5B0 115 aa16.35■□□□□ 0.21
SMG6-214ENST00000573827 B4GALT2O60909 372 aa16.35■□□□□ 0.21
SMG6-214ENST00000573827 DDAH2O95865 285 aa16.35■□□□□ 0.21
SMG6-214ENST00000573827 MTHFD2P13995 350 aa16.35■□□□□ 0.21
SMG6-214ENST00000573827 HSPA7P48741 367 aa16.35■□□□□ 0.21
SMG6-214ENST00000573827 SKP1P63208 163 aa16.35■□□□□ 0.21
SMG6-214ENST00000573827 PCDH1Q08174 1060 aa16.35■□□□□ 0.21
SMG6-214ENST00000573827 RUNX2Q13950 521 aa16.35■□□□□ 0.21
SMG6-214ENST00000573827 EXT1Q16394 746 aa16.35■□□□□ 0.21
SMG6-214ENST00000573827 ABHD17BQ5VST6 288 aa16.35■□□□□ 0.21
SMG6-214ENST00000573827 SCUBE1Q8IWY4 988 aa16.35■□□□□ 0.21
SMG6-214ENST00000573827 CENPLQ8N0S6 344 aaPredicted RBP16.35■□□□□ 0.21
SMG6-214ENST00000573827 BEST3Q8N1M1 668 aa16.35■□□□□ 0.21
SMG6-214ENST00000573827 MDS2Q8NDY4 140 aa16.35■□□□□ 0.21
SMG6-214ENST00000573827 GAL3ST3Q96A11 431 aa16.35■□□□□ 0.21
SMG6-214ENST00000573827 PITHD1Q9GZP4 211 aaPredicted RBP16.35■□□□□ 0.21
SMG6-214ENST00000573827 RHBGQ9H310 441 aa16.35■□□□□ 0.21
SMG6-214ENST00000573827 NECTIN3Q9NQS3 549 aa16.35■□□□□ 0.21
SMG6-214ENST00000573827 TXNDC16Q9P2K2 825 aa16.35■□□□□ 0.21
SMG6-214ENST00000573827 PLEKHB1Q9UF11 243 aaPredicted RBP16.35■□□□□ 0.21
SMG6-214ENST00000573827 A8MUI8 341 aa16.34■□□□□ 0.21
SMG6-214ENST00000573827 TGFBR3LH3BV60 316 aa16.34■□□□□ 0.21
SMG6-214ENST00000573827 PRAMEF2O60811 474 aa16.34■□□□□ 0.21
SMG6-214ENST00000573827 CLEC3AO75596 197 aa16.34■□□□□ 0.21
SMG6-214ENST00000573827 STK16O75716 305 aa16.34■□□□□ 0.21
SMG6-214ENST00000573827 WISP2O76076 250 aa16.34■□□□□ 0.21
SMG6-214ENST00000573827 RNH1P13489 461 aaKnown RBP16.34■□□□□ 0.21
SMG6-214ENST00000573827 MAOAP21397 527 aa16.34■□□□□ 0.21
SMG6-214ENST00000573827 JAK1P23458 1154 aa16.34■□□□□ 0.21
SMG6-214ENST00000573827 GSTM2P28161 218 aa16.34■□□□□ 0.21
SMG6-214ENST00000573827 STX2P32856 288 aa16.34■□□□□ 0.21
SMG6-214ENST00000573827 CASP2P42575 452 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms